Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AP000926.1-201ENST00000479573 241 ntBASIC3.81□□□□□ -1.8
HOXC6P09630 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.81□□□□□ -1.8
HOXC6P09630 HMGB1P36-201ENST00000487709 576 ntBASIC3.81□□□□□ -1.8
HOXC6P09630 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.81□□□□□ -1.8
HOXC6P09630 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.81□□□□□ -1.8
HOXC6P09630 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.81□□□□□ -1.8
HOXC6P09630 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.81□□□□□ -1.8
HOXC6P09630 APOOP4-201ENST00000513530 597 ntBASIC3.81□□□□□ -1.8
HOXC6P09630 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.81□□□□□ -1.8
HOXC6P09630 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.81□□□□□ -1.8
HOXC6P09630 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.81□□□□□ -1.8
HOXC6P09630 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.81□□□□□ -1.8
HOXC6P09630 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.81□□□□□ -1.8
HOXC6P09630 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.81□□□□□ -1.8
HOXC6P09630 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.81□□□□□ -1.8
HOXC6P09630 AC026333.2-201ENST00000542164 106 ntBASIC3.81□□□□□ -1.8
HOXC6P09630 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.81□□□□□ -1.8
HOXC6P09630 AC005476.1-201ENST00000554427 397 ntBASIC3.81□□□□□ -1.8
HOXC6P09630 AC006504.3-201ENST00000586818 523 ntBASIC3.81□□□□□ -1.8
HOXC6P09630 AL022154.1-201ENST00000604698 785 ntBASIC3.81□□□□□ -1.8
HOXC6P09630 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.81□□□□□ -1.8
HOXC6P09630 AC092954.2-201ENST00000609103 430 ntBASIC3.81□□□□□ -1.8
HOXC6P09630 AP001506.1-201ENST00000615444 211 ntBASIC3.81□□□□□ -1.8
HOXC6P09630 U4.5-201ENST00000617137 123 ntBASIC3.81□□□□□ -1.8
HOXC6P09630 RNU6-156P-201ENST00000621869 107 ntBASIC3.81□□□□□ -1.8
HOXC6P09630 CR381653.2-201ENST00000624041 768 ntBASIC3.81□□□□□ -1.8
HOXC6P09630 AC068880.5-201ENST00000624331 290 ntBASIC3.81□□□□□ -1.8
HOXC6P09630 FAM157B-203ENST00000639350 358 ntBASIC3.81□□□□□ -1.8
HOXC6P09630 AC099654.13-201ENST00000639774 207 ntBASIC3.81□□□□□ -1.8
HOXC6P09630 FAM35DP-201ENST00000323387 2712 ntBASIC3.81□□□□□ -1.8
HOXC6P09630 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.8□□□□□ -1.8
HOXC6P09630 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
HOXC6P09630 AL136964.1-201ENST00000622038 2990 ntBASIC3.8□□□□□ -1.8
HOXC6P09630 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
HOXC6P09630 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
HOXC6P09630 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.8□□□□□ -1.8
HOXC6P09630 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HOXC6P09630 MIR422A-201ENST00000362286 90 ntBASIC3.8□□□□□ -1.8
HOXC6P09630 RNU5E-4P-201ENST00000364931 120 ntBASIC3.8□□□□□ -1.8
HOXC6P09630 RNU6-769P-201ENST00000384407 104 ntBASIC3.8□□□□□ -1.8
HOXC6P09630 AC063979.1-201ENST00000415539 377 ntBASIC3.8□□□□□ -1.8
HOXC6P09630 RAC1P3-201ENST00000416129 580 ntBASIC3.8□□□□□ -1.8
HOXC6P09630 COTL1P1-201ENST00000422309 375 ntBASIC3.8□□□□□ -1.8
HOXC6P09630 USP9YP18-201ENST00000425912 695 ntBASIC3.8□□□□□ -1.8
HOXC6P09630 ISCA1P1-201ENST00000426679 387 ntBASIC3.8□□□□□ -1.8
HOXC6P09630 FTH1P6-201ENST00000430768 320 ntBASIC3.8□□□□□ -1.8
HOXC6P09630 AC109583.1-201ENST00000432156 268 ntBASIC3.8□□□□□ -1.8
HOXC6P09630 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.8□□□□□ -1.8
HOXC6P09630 AL353705.1-201ENST00000433468 480 ntBASIC3.8□□□□□ -1.8
HOXC6P09630 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.8□□□□□ -1.8
HOXC6P09630 AL357552.1-201ENST00000445254 415 ntBASIC3.8□□□□□ -1.8
HOXC6P09630 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HOXC6P09630 FGF7P6-202ENST00000451282 293 ntBASIC3.8□□□□□ -1.8
HOXC6P09630 Z82190.1-201ENST00000454534 490 ntBASIC3.8□□□□□ -1.8
HOXC6P09630 RPL31P50-201ENST00000471002 296 ntBASIC3.8□□□□□ -1.8
HOXC6P09630 RPS3AP50-201ENST00000487064 803 ntBASIC3.8□□□□□ -1.8
HOXC6P09630 AC106872.3-201ENST00000495104 446 ntBASIC3.8□□□□□ -1.8
HOXC6P09630 AC012170.1-201ENST00000495139 359 ntBASIC3.8□□□□□ -1.8
HOXC6P09630 AC091133.4-201ENST00000511142 308 ntBASIC3.8□□□□□ -1.8
HOXC6P09630 RNU6-430P-201ENST00000517078 107 ntBASIC3.8□□□□□ -1.8
HOXC6P09630 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.8□□□□□ -1.8
HOXC6P09630 AC008127.2-201ENST00000549925 1075 ntBASIC3.8□□□□□ -1.8
HOXC6P09630 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.8□□□□□ -1.8
HOXC6P09630 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.8□□□□□ -1.8
HOXC6P09630 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.8□□□□□ -1.8
HOXC6P09630 AL357078.3-201ENST00000607528 618 ntBASIC3.8□□□□□ -1.8
HOXC6P09630 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.8□□□□□ -1.8
HOXC6P09630 U6.42-201ENST00000618440 107 ntBASIC3.8□□□□□ -1.8
HOXC6P09630 AL356321.1-201ENST00000621360 228 ntBASIC3.8□□□□□ -1.8
HOXC6P09630 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.8□□□□□ -1.8
HOXC6P09630 AC110801.1-201ENST00000623590 212 ntBASIC3.8□□□□□ -1.8
HOXC6P09630 AC124864.2-201ENST00000624736 186 ntBASIC3.8□□□□□ -1.8
HOXC6P09630 AC110994.2-201ENST00000635481 492 ntBASIC3.8□□□□□ -1.8
HOXC6P09630 AC017071.1-201ENST00000564407 2204 ntBASIC3.8□□□□□ -1.8
HOXC6P09630 ZNF807-201ENST00000328088 1707 ntBASIC3.8□□□□□ -1.8
HOXC6P09630 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.8□□□□□ -1.8
HOXC6P09630 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
HOXC6P09630 CR848007.1-201ENST00000442354 1699 ntBASIC3.8□□□□□ -1.8
HOXC6P09630 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
HOXC6P09630 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.8□□□□□ -1.8
HOXC6P09630 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
HOXC6P09630 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HOXC6P09630 AL139811.1-201ENST00000424779 2299 ntBASIC3.79□□□□□ -1.8
HOXC6P09630 AC068647.1-201ENST00000489539 2265 ntBASIC3.79□□□□□ -1.8
HOXC6P09630 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.79□□□□□ -1.8
HOXC6P09630 Y_RNA.88-201ENST00000363029 99 ntBASIC3.79□□□□□ -1.8
HOXC6P09630 RNU6-343P-201ENST00000364709 104 ntBASIC3.79□□□□□ -1.8
HOXC6P09630 RNY4P34-201ENST00000364779 95 ntBASIC3.79□□□□□ -1.8
HOXC6P09630 Y_RNA.303-201ENST00000364998 94 ntBASIC3.79□□□□□ -1.8
HOXC6P09630 Y_RNA.372-201ENST00000365599 102 ntBASIC3.79□□□□□ -1.8
HOXC6P09630 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.79□□□□□ -1.8
HOXC6P09630 SNORA51.6-201ENST00000384151 125 ntBASIC3.79□□□□□ -1.8
HOXC6P09630 TPMTP2-201ENST00000414372 726 ntBASIC3.79□□□□□ -1.8
HOXC6P09630 C1DP2-201ENST00000418167 426 ntBASIC3.79□□□□□ -1.8
HOXC6P09630 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.79□□□□□ -1.8
HOXC6P09630 USP9YP36-201ENST00000424581 829 ntBASIC3.79□□□□□ -1.8
HOXC6P09630 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.79□□□□□ -1.8
HOXC6P09630 AL158071.1-201ENST00000430315 461 ntBASIC3.79□□□□□ -1.8
HOXC6P09630 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.79□□□□□ -1.8
HOXC6P09630 AL358934.1-201ENST00000432346 324 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms