Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 snoU109.1-201ENST00000459339 135 ntBASIC3.33□□□□□ -1.88
CD48P09326 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.33□□□□□ -1.88
CD48P09326 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.33□□□□□ -1.88
CD48P09326 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.33□□□□□ -1.88
CD48P09326 RNU6-1003P-201ENST00000517099 105 ntBASIC3.33□□□□□ -1.88
CD48P09326 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.33□□□□□ -1.88
CD48P09326 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.33□□□□□ -1.88
CD48P09326 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.33□□□□□ -1.88
CD48P09326 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.33□□□□□ -1.88
CD48P09326 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.33□□□□□ -1.88
CD48P09326 NCAPGP2-201ENST00000557911 754 ntBASIC3.33□□□□□ -1.88
CD48P09326 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.33□□□□□ -1.88
CD48P09326 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.33□□□□□ -1.88
CD48P09326 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.33□□□□□ -1.88
CD48P09326 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CD48P09326 AL390208.1-201ENST00000605885 644 ntBASIC3.33□□□□□ -1.88
CD48P09326 AL513477.2-201ENST00000607858 568 ntBASIC3.33□□□□□ -1.88
CD48P09326 AC109347.2-201ENST00000610220 349 ntBASIC3.33□□□□□ -1.88
CD48P09326 AC012531.5-201ENST00000611375 151 ntBASIC3.33□□□□□ -1.88
CD48P09326 AL157817.1-201ENST00000614264 790 ntBASIC3.33□□□□□ -1.88
CD48P09326 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CD48P09326 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.33□□□□□ -1.88
CD48P09326 AC244100.1-202ENST00000621554 382 ntBASIC3.33□□□□□ -1.88
CD48P09326 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.33□□□□□ -1.88
CD48P09326 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
CD48P09326 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.32□□□□□ -1.88
CD48P09326 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CD48P09326 RNU6-1215P-201ENST00000384441 102 ntBASIC3.32□□□□□ -1.88
CD48P09326 RPL31P1-201ENST00000398116 372 ntBASIC3.32□□□□□ -1.88
CD48P09326 AL357075.1-201ENST00000404107 726 ntBASIC3.32□□□□□ -1.88
CD48P09326 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.32□□□□□ -1.88
CD48P09326 Y_RNA.608-201ENST00000410647 95 ntBASIC3.32□□□□□ -1.88
CD48P09326 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.32□□□□□ -1.88
CD48P09326 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.32□□□□□ -1.88
CD48P09326 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.32□□□□□ -1.88
CD48P09326 AL590233.1-201ENST00000430017 456 ntBASIC3.32□□□□□ -1.88
CD48P09326 AP000542.1-201ENST00000448473 371 ntBASIC3.32□□□□□ -1.88
CD48P09326 AC005297.2-201ENST00000450430 606 ntBASIC3.32□□□□□ -1.88
CD48P09326 MTND1P27-201ENST00000451117 902 ntBASIC3.32□□□□□ -1.88
CD48P09326 BX276092.4-201ENST00000452056 248 ntBASIC3.32□□□□□ -1.88
CD48P09326 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.32□□□□□ -1.88
CD48P09326 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.32□□□□□ -1.88
CD48P09326 BTF3P5-201ENST00000457252 467 ntBASIC3.32□□□□□ -1.88
CD48P09326 AP001992.1-205ENST00000462248 379 ntBASIC3.32□□□□□ -1.88
CD48P09326 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.32□□□□□ -1.88
CD48P09326 KCTD9P5-201ENST00000504141 1170 ntBASIC3.32□□□□□ -1.88
CD48P09326 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.32□□□□□ -1.88
CD48P09326 RN7SKP277-201ENST00000516895 283 ntBASIC3.32□□□□□ -1.88
CD48P09326 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.32□□□□□ -1.88
CD48P09326 AP003392.2-201ENST00000527269 208 ntBASIC3.32□□□□□ -1.88
CD48P09326 AC011611.1-201ENST00000552179 197 ntBASIC3.32□□□□□ -1.88
CD48P09326 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.32□□□□□ -1.88
CD48P09326 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.32□□□□□ -1.88
CD48P09326 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.32□□□□□ -1.88
CD48P09326 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.32□□□□□ -1.88
CD48P09326 BNIP3P8-201ENST00000597863 560 ntBASIC3.32□□□□□ -1.88
CD48P09326 AC008739.3-201ENST00000603262 127 ntBASIC3.32□□□□□ -1.88
CD48P09326 SEPT7P9-203ENST00000604116 343 ntBASIC3.32□□□□□ -1.88
CD48P09326 AC107304.1-201ENST00000604229 296 ntBASIC3.32□□□□□ -1.88
CD48P09326 AC112191.3-201ENST00000604371 277 ntBASIC3.32□□□□□ -1.88
CD48P09326 AC073657.2-201ENST00000605661 303 ntBASIC3.32□□□□□ -1.88
CD48P09326 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.32□□□□□ -1.88
CD48P09326 AC015967.1-201ENST00000619893 476 ntBASIC3.32□□□□□ -1.88
CD48P09326 AC095031.1-201ENST00000623685 672 ntBASIC3.32□□□□□ -1.88
CD48P09326 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.32□□□□□ -1.88
CD48P09326 U6.98-201ENST00000637157 84 ntBASIC3.32□□□□□ -1.88
CD48P09326 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CD48P09326 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CD48P09326 AC092447.10-201ENST00000620607 1652 ntBASIC3.32□□□□□ -1.88
CD48P09326 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CD48P09326 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CD48P09326 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CD48P09326 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CD48P09326 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
CD48P09326 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.31□□□□□ -1.88
CD48P09326 NUP58P1-201ENST00000502546 1738 ntBASIC3.31□□□□□ -1.88
CD48P09326 AL359893.1-201ENST00000447628 1580 ntBASIC3.31□□□□□ -1.88
CD48P09326 CCT4P2-201ENST00000233836 1548 ntBASIC3.31□□□□□ -1.88
CD48P09326 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CD48P09326 Y_RNA.6-201ENST00000362350 114 ntBASIC3.31□□□□□ -1.88
CD48P09326 SNORD46.1-201ENST00000364139 104 ntBASIC3.31□□□□□ -1.88
CD48P09326 SNORA40.3-201ENST00000390964 122 ntBASIC3.31□□□□□ -1.88
CD48P09326 Y_RNA.582-201ENST00000391023 95 ntBASIC3.31□□□□□ -1.88
CD48P09326 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.31□□□□□ -1.88
CD48P09326 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CD48P09326 MTND4LP20-201ENST00000402379 270 ntBASIC3.31□□□□□ -1.88
CD48P09326 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.31□□□□□ -1.88
CD48P09326 NDUFB4P5-201ENST00000415445 361 ntBASIC3.31□□□□□ -1.88
CD48P09326 MTATP6P27-201ENST00000416987 621 ntBASIC3.31□□□□□ -1.88
CD48P09326 USP9YP13-201ENST00000417797 480 ntBASIC3.31□□□□□ -1.88
CD48P09326 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.31□□□□□ -1.88
CD48P09326 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.31□□□□□ -1.88
CD48P09326 AC007742.1-201ENST00000425789 329 ntBASIC3.31□□□□□ -1.88
CD48P09326 AL138785.1-201ENST00000425821 331 ntBASIC3.31□□□□□ -1.88
CD48P09326 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.31□□□□□ -1.88
CD48P09326 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.31□□□□□ -1.88
CD48P09326 ELOCP26-201ENST00000436067 329 ntBASIC3.31□□□□□ -1.88
CD48P09326 DNAJC19P4-201ENST00000440115 345 ntBASIC3.31□□□□□ -1.88
CD48P09326 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.31□□□□□ -1.88
CD48P09326 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms