Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 AC080013.4-201ENST00000607624 649 ntBASIC2.28□□□□□ -2.04
MT-ND4P03905 AC123767.1-202ENST00000620407 817 ntBASIC2.28□□□□□ -2.04
MT-ND4P03905 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.28□□□□□ -2.04
MT-ND4P03905 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
MT-ND4P03905 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
MT-ND4P03905 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
MT-ND4P03905 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.28□□□□□ -2.04
MT-ND4P03905 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
MT-ND4P03905 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
MT-ND4P03905 AC073346.2-201ENST00000624724 2058 ntBASIC2.27□□□□□ -2.05
MT-ND4P03905 DEFB108F-201ENST00000344638 222 ntBASIC2.27□□□□□ -2.05
MT-ND4P03905 RNU4-51P-201ENST00000364206 140 ntBASIC2.27□□□□□ -2.05
MT-ND4P03905 RNU1-138P-201ENST00000384093 164 ntBASIC2.27□□□□□ -2.05
MT-ND4P03905 Y_RNA.548-201ENST00000384656 105 ntBASIC2.27□□□□□ -2.05
MT-ND4P03905 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
MT-ND4P03905 UBA52P6-201ENST00000399822 382 ntBASIC2.27□□□□□ -2.05
MT-ND4P03905 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.27□□□□□ -2.05
MT-ND4P03905 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.27□□□□□ -2.05
MT-ND4P03905 AL449283.1-202ENST00000418249 604 ntBASIC2.27□□□□□ -2.05
MT-ND4P03905 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.27□□□□□ -2.05
MT-ND4P03905 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
MT-ND4P03905 RPL27AP8-201ENST00000424277 446 ntBASIC2.27□□□□□ -2.05
MT-ND4P03905 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.27□□□□□ -2.05
MT-ND4P03905 AC092573.2-201ENST00000434546 243 ntBASIC2.27□□□□□ -2.05
MT-ND4P03905 AC112220.1-201ENST00000434628 355 ntBASIC2.27□□□□□ -2.05
MT-ND4P03905 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.27□□□□□ -2.05
MT-ND4P03905 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.27□□□□□ -2.05
MT-ND4P03905 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.27□□□□□ -2.05
MT-ND4P03905 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.27□□□□□ -2.05
MT-ND4P03905 AC133134.1-201ENST00000466800 359 ntBASIC2.27□□□□□ -2.05
MT-ND4P03905 S100A11P2-201ENST00000467589 312 ntBASIC2.27□□□□□ -2.05
MT-ND4P03905 AC079203.1-201ENST00000487972 404 ntBASIC2.27□□□□□ -2.05
MT-ND4P03905 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.27□□□□□ -2.05
MT-ND4P03905 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.27□□□□□ -2.05
MT-ND4P03905 RNA5SP367-201ENST00000516557 118 ntBASIC2.27□□□□□ -2.05
MT-ND4P03905 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.27□□□□□ -2.05
MT-ND4P03905 AP003102.1-201ENST00000525638 661 ntBASIC2.27□□□□□ -2.05
MT-ND4P03905 DEFB108D-201ENST00000527787 222 ntBASIC2.27□□□□□ -2.05
MT-ND4P03905 LRRC6P1-201ENST00000532188 885 ntBASIC2.27□□□□□ -2.05
MT-ND4P03905 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.27□□□□□ -2.05
MT-ND4P03905 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC2.27□□□□□ -2.05
MT-ND4P03905 AC011260.1-201ENST00000578420 472 ntBASIC2.27□□□□□ -2.05
MT-ND4P03905 MIR4325-201ENST00000583049 90 ntBASIC2.27□□□□□ -2.05
MT-ND4P03905 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.27□□□□□ -2.05
MT-ND4P03905 VN1R83P-201ENST00000595685 445 ntBASIC2.27□□□□□ -2.05
MT-ND4P03905 AL049779.4-201ENST00000604500 156 ntBASIC2.27□□□□□ -2.05
MT-ND4P03905 AL390208.1-201ENST00000605885 644 ntBASIC2.27□□□□□ -2.05
MT-ND4P03905 AC034102.8-201ENST00000615146 484 ntBASIC2.27□□□□□ -2.05
MT-ND4P03905 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.27□□□□□ -2.05
MT-ND4P03905 AC027309.3-201ENST00000623419 351 ntBASIC2.27□□□□□ -2.05
MT-ND4P03905 AC090772.4-201ENST00000623599 362 ntBASIC2.27□□□□□ -2.05
MT-ND4P03905 AC012321.1-201ENST00000561622 1588 ntBASIC2.27□□□□□ -2.05
MT-ND4P03905 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC2.26□□□□□ -2.05
MT-ND4P03905 SNORA18.3-201ENST00000384122 132 ntBASIC2.26□□□□□ -2.05
MT-ND4P03905 RNU6-1197P-201ENST00000391183 107 ntBASIC2.26□□□□□ -2.05
MT-ND4P03905 AL138827.1-201ENST00000402666 306 ntBASIC2.26□□□□□ -2.05
MT-ND4P03905 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
MT-ND4P03905 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.26□□□□□ -2.05
MT-ND4P03905 Z75741.2-201ENST00000417272 1167 ntBASIC2.26□□□□□ -2.05
MT-ND4P03905 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC2.26□□□□□ -2.05
MT-ND4P03905 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.26□□□□□ -2.05
MT-ND4P03905 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.26□□□□□ -2.05
MT-ND4P03905 AC129850.1-201ENST00000436203 508 ntBASIC2.26□□□□□ -2.05
MT-ND4P03905 AL121871.1-201ENST00000443413 436 ntBASIC2.26□□□□□ -2.05
MT-ND4P03905 AL592447.1-201ENST00000447592 540 ntBASIC2.26□□□□□ -2.05
MT-ND4P03905 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.26□□□□□ -2.05
MT-ND4P03905 AC114981.1-201ENST00000503897 678 ntBASIC2.26□□□□□ -2.05
MT-ND4P03905 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.26□□□□□ -2.05
MT-ND4P03905 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
MT-ND4P03905 HIGD1AP13-201ENST00000509878 289 ntBASIC2.26□□□□□ -2.05
MT-ND4P03905 AL359273.1-201ENST00000510918 627 ntBASIC2.26□□□□□ -2.05
MT-ND4P03905 RNU6-583P-201ENST00000516012 92 ntBASIC2.26□□□□□ -2.05
MT-ND4P03905 RNU6-798P-201ENST00000516912 103 ntBASIC2.26□□□□□ -2.05
MT-ND4P03905 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.26□□□□□ -2.05
MT-ND4P03905 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.26□□□□□ -2.05
MT-ND4P03905 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.26□□□□□ -2.05
MT-ND4P03905 AC118942.1-201ENST00000529674 1035 ntBASIC2.26□□□□□ -2.05
MT-ND4P03905 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.26□□□□□ -2.05
MT-ND4P03905 MTND3P13-201ENST00000574391 343 ntBASIC2.26□□□□□ -2.05
MT-ND4P03905 VN1R78P-201ENST00000597393 564 ntBASIC2.26□□□□□ -2.05
MT-ND4P03905 AL136363.1-201ENST00000605349 337 ntBASIC2.26□□□□□ -2.05
MT-ND4P03905 AL442067.2-201ENST00000614033 363 ntBASIC2.26□□□□□ -2.05
MT-ND4P03905 AL450472.3-201ENST00000615578 367 ntBASIC2.26□□□□□ -2.05
MT-ND4P03905 AC006213.4-201ENST00000616184 634 ntBASIC2.26□□□□□ -2.05
MT-ND4P03905 AL596245.1-201ENST00000618994 362 ntBASIC2.26□□□□□ -2.05
MT-ND4P03905 AC011330.2-201ENST00000621680 635 ntBASIC2.26□□□□□ -2.05
MT-ND4P03905 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.26□□□□□ -2.05
MT-ND4P03905 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.26□□□□□ -2.05
MT-ND4P03905 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
MT-ND4P03905 CRYM-AS1-204ENST00000637983 556 ntBASIC2.26□□□□□ -2.05
MT-ND4P03905 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
MT-ND4P03905 AC008568.2-201ENST00000623862 2313 ntBASIC2.26□□□□□ -2.05
MT-ND4P03905 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
MT-ND4P03905 AC093536.2-201ENST00000565257 1406 ntBASIC2.25□□□□□ -2.05
MT-ND4P03905 AC087359.1-201ENST00000508335 1740 ntBASIC2.25□□□□□ -2.05
MT-ND4P03905 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
MT-ND4P03905 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
MT-ND4P03905 TAS2R15P-201ENST00000390674 928 ntBASIC2.25□□□□□ -2.05
MT-ND4P03905 RNU6-1000P-201ENST00000391066 106 ntBASIC2.25□□□□□ -2.05
MT-ND4P03905 AL139421.1-201ENST00000423010 169 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms