Protein–RNA interactions for Protein: O95639

CPSF4, Cleavage and polyadenylation specificity factor subunit 4, humanhuman

Known RBP Predictions only

Length 269 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4O95639 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CPSF4O95639 AC099677.1-201ENST00000420575 175 ntBASIC2.05□□□□□ -2.08
CPSF4O95639 AC005005.2-201ENST00000420779 380 ntBASIC2.05□□□□□ -2.08
CPSF4O95639 PTP4A1P7-201ENST00000423476 514 ntBASIC2.05□□□□□ -2.08
CPSF4O95639 UBE2D3P2-201ENST00000424409 445 ntBASIC2.05□□□□□ -2.08
CPSF4O95639 DPRXP1-201ENST00000426312 460 ntBASIC2.05□□□□□ -2.08
CPSF4O95639 MTATP6P4-201ENST00000427725 675 ntBASIC2.05□□□□□ -2.08
CPSF4O95639 MTCO1P3-201ENST00000429327 192 ntBASIC2.05□□□□□ -2.08
CPSF4O95639 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.05□□□□□ -2.08
CPSF4O95639 MTND4LP10-201ENST00000435146 291 ntBASIC2.05□□□□□ -2.08
CPSF4O95639 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.05□□□□□ -2.08
CPSF4O95639 VN1R10P-201ENST00000447106 875 ntBASIC2.05□□□□□ -2.08
CPSF4O95639 AC079776.3-201ENST00000450665 370 ntBASIC2.05□□□□□ -2.08
CPSF4O95639 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.05□□□□□ -2.08
CPSF4O95639 snoU109.4-201ENST00000458953 143 ntBASIC2.05□□□□□ -2.08
CPSF4O95639 AC092757.1-201ENST00000467293 467 ntBASIC2.05□□□□□ -2.08
CPSF4O95639 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.05□□□□□ -2.08
CPSF4O95639 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
CPSF4O95639 OR4G11P-201ENST00000492842 939 ntBASIC2.05□□□□□ -2.08
CPSF4O95639 AC008427.1-201ENST00000503102 655 ntBASIC2.05□□□□□ -2.08
CPSF4O95639 KLRA1P-201ENST00000503499 986 ntBASIC2.05□□□□□ -2.08
CPSF4O95639 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.05□□□□□ -2.08
CPSF4O95639 SUMO2P5-201ENST00000506790 245 ntBASIC2.05□□□□□ -2.08
CPSF4O95639 AC006390.1-201ENST00000508068 283 ntBASIC2.05□□□□□ -2.08
CPSF4O95639 RNU6-1028P-201ENST00000517164 93 ntBASIC2.05□□□□□ -2.08
CPSF4O95639 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.05□□□□□ -2.08
CPSF4O95639 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.05□□□□□ -2.08
CPSF4O95639 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CPSF4O95639 DEFB130C-202ENST00000530001 230 ntBASIC2.05□□□□□ -2.08
CPSF4O95639 SNRPGP16-201ENST00000533275 226 ntBASIC2.05□□□□□ -2.08
CPSF4O95639 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC2.05□□□□□ -2.08
CPSF4O95639 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.05□□□□□ -2.08
CPSF4O95639 AC138915.2-201ENST00000569776 97 ntBASIC2.05□□□□□ -2.08
CPSF4O95639 AC007336.1-201ENST00000576365 3828 ntBASIC2.05□□□□□ -2.08
CPSF4O95639 AC103810.1-201ENST00000579873 453 ntBASIC2.05□□□□□ -2.08
CPSF4O95639 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.05□□□□□ -2.08
CPSF4O95639 AP001330.4-201ENST00000604350 154 ntBASIC2.05□□□□□ -2.08
CPSF4O95639 AL353748.2-201ENST00000622148 471 ntBASIC2.05□□□□□ -2.08
CPSF4O95639 AC109454.4-201ENST00000623411 649 ntBASIC2.05□□□□□ -2.08
CPSF4O95639 AC095031.1-201ENST00000623685 672 ntBASIC2.05□□□□□ -2.08
CPSF4O95639 AP003476.1-201ENST00000623984 516 ntBASIC2.05□□□□□ -2.08
CPSF4O95639 AP000676.4-201ENST00000624659 623 ntBASIC2.05□□□□□ -2.08
CPSF4O95639 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.05□□□□□ -2.08
CPSF4O95639 MAPK10-322ENST00000641485 4530 ntBASIC2.05□□□□□ -2.08
CPSF4O95639 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
CPSF4O95639 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CPSF4O95639 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
CPSF4O95639 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
CPSF4O95639 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CPSF4O95639 SNORD51-201ENST00000384320 80 ntBASIC2.04□□□□□ -2.08
CPSF4O95639 MTCO1P56-201ENST00000401674 224 ntBASIC2.04□□□□□ -2.08
CPSF4O95639 RNU2-15P-201ENST00000410692 191 ntBASIC2.04□□□□□ -2.08
CPSF4O95639 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.04□□□□□ -2.08
CPSF4O95639 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC2.04□□□□□ -2.08
CPSF4O95639 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CPSF4O95639 PSMA6P3-201ENST00000428242 164 ntBASIC2.04□□□□□ -2.08
CPSF4O95639 AC092427.1-202ENST00000430569 476 ntBASIC2.04□□□□□ -2.08
CPSF4O95639 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.04□□□□□ -2.08
CPSF4O95639 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
CPSF4O95639 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
CPSF4O95639 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.04□□□□□ -2.08
CPSF4O95639 HIGD1AP2-201ENST00000446367 280 ntBASIC2.04□□□□□ -2.08
CPSF4O95639 AL031659.1-201ENST00000447075 539 ntBASIC2.04□□□□□ -2.08
CPSF4O95639 AC073901.1-201ENST00000462471 408 ntBASIC2.04□□□□□ -2.08
CPSF4O95639 AC010460.2-201ENST00000509054 677 ntBASIC2.04□□□□□ -2.08
CPSF4O95639 AC105914.1-201ENST00000511798 226 ntBASIC2.04□□□□□ -2.08
CPSF4O95639 SNORA31.8-201ENST00000516327 108 ntBASIC2.04□□□□□ -2.08
CPSF4O95639 RNU6-1261P-201ENST00000517194 104 ntBASIC2.04□□□□□ -2.08
CPSF4O95639 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.04□□□□□ -2.08
CPSF4O95639 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.04□□□□□ -2.08
CPSF4O95639 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC2.04□□□□□ -2.08
CPSF4O95639 AP001189.2-201ENST00000527320 189 ntBASIC2.04□□□□□ -2.08
CPSF4O95639 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CPSF4O95639 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CPSF4O95639 AC018630.1-201ENST00000541376 925 ntBASIC2.04□□□□□ -2.08
CPSF4O95639 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.04□□□□□ -2.08
CPSF4O95639 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.04□□□□□ -2.08
CPSF4O95639 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC2.04□□□□□ -2.08
CPSF4O95639 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.04□□□□□ -2.08
CPSF4O95639 AC093673.2-201ENST00000609674 331 ntBASIC2.04□□□□□ -2.08
CPSF4O95639 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.04□□□□□ -2.08
CPSF4O95639 MIR6132-201ENST00000622083 109 ntBASIC2.04□□□□□ -2.08
CPSF4O95639 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.04□□□□□ -2.08
CPSF4O95639 MKKS-204ENST00000639674 192 ntBASIC2.04□□□□□ -2.08
CPSF4O95639 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CPSF4O95639 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CPSF4O95639 SGO1P2-201ENST00000429458 1589 ntBASIC2.03□□□□□ -2.08
CPSF4O95639 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.03□□□□□ -2.08
CPSF4O95639 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC2.03□□□□□ -2.08
CPSF4O95639 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CPSF4O95639 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
CPSF4O95639 SNORA14A-201ENST00000364773 135 ntBASIC2.03□□□□□ -2.08
CPSF4O95639 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
CPSF4O95639 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.03□□□□□ -2.08
CPSF4O95639 RNU6-1257P-201ENST00000384625 110 ntBASIC2.03□□□□□ -2.08
CPSF4O95639 Y_RNA.578-201ENST00000390903 88 ntBASIC2.03□□□□□ -2.08
CPSF4O95639 CYCSP45-201ENST00000402289 315 ntBASIC2.03□□□□□ -2.08
CPSF4O95639 USP9YP27-201ENST00000418455 438 ntBASIC2.03□□□□□ -2.08
CPSF4O95639 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC2.03□□□□□ -2.08
CPSF4O95639 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms