Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 CD69-203ENST00000536709 1020 ntTSL 2 BASIC1.52□□□□□ -2.17
CACNA1AO00555 OOSP1P2-201ENST00000579644 351 ntBASIC1.52□□□□□ -2.17
CACNA1AO00555 MIR2909-201ENST00000617113 69 ntBASIC1.52□□□□□ -2.17
CACNA1AO00555 MIR6759-201ENST00000638110 65 ntBASIC1.52□□□□□ -2.17
CACNA1AO00555 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC1.52□□□□□ -2.17
CACNA1AO00555 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.52□□□□□ -2.17
CACNA1AO00555 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC1.52□□□□□ -2.17
CACNA1AO00555 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.52□□□□□ -2.17
CACNA1AO00555 AC099548.1-201ENST00000421443 426 ntBASIC1.52□□□□□ -2.17
CACNA1AO00555 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC1.52□□□□□ -2.17
CACNA1AO00555 HIGD1AP11-201ENST00000438361 280 ntBASIC1.52□□□□□ -2.17
CACNA1AO00555 MTND6P13-201ENST00000443510 523 ntBASIC1.52□□□□□ -2.17
CACNA1AO00555 USP9YP10-201ENST00000454868 628 ntBASIC1.52□□□□□ -2.17
CACNA1AO00555 AC146507.1-201ENST00000468335 354 ntBASIC1.52□□□□□ -2.17
CACNA1AO00555 AC006483.1-201ENST00000487308 313 ntBASIC1.52□□□□□ -2.17
CACNA1AO00555 RNU6-1231P-201ENST00000517185 103 ntBASIC1.52□□□□□ -2.17
CACNA1AO00555 AC087241.2-201ENST00000535801 324 ntBASIC1.52□□□□□ -2.17
CACNA1AO00555 AC124283.4-201ENST00000581815 456 ntBASIC1.52□□□□□ -2.17
CACNA1AO00555 UBE2L2-201ENST00000254302 429 ntBASIC1.51□□□□□ -2.17
CACNA1AO00555 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
CACNA1AO00555 RNU6-418P-201ENST00000384035 107 ntBASIC1.51□□□□□ -2.17
CACNA1AO00555 Y_RNA.572-201ENST00000384757 98 ntBASIC1.51□□□□□ -2.17
CACNA1AO00555 JTBP1-201ENST00000441314 247 ntBASIC1.51□□□□□ -2.17
CACNA1AO00555 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.51□□□□□ -2.17
CACNA1AO00555 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.51□□□□□ -2.17
CACNA1AO00555 HMGB1P47-201ENST00000511281 589 ntBASIC1.51□□□□□ -2.17
CACNA1AO00555 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.51□□□□□ -2.17
CACNA1AO00555 SEPT7P9-203ENST00000604116 343 ntBASIC1.51□□□□□ -2.17
CACNA1AO00555 AC013553.2-201ENST00000604244 589 ntBASIC1.51□□□□□ -2.17
CACNA1AO00555 BNIP3P4-201ENST00000604946 565 ntBASIC1.51□□□□□ -2.17
CACNA1AO00555 AC012078.1-201ENST00000405035 1646 ntBASIC1.51□□□□□ -2.17
CACNA1AO00555 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
CACNA1AO00555 HSPD1P16-201ENST00000402302 394 ntBASIC1.51□□□□□ -2.17
CACNA1AO00555 MIR1207-201ENST00000408249 87 ntBASIC1.51□□□□□ -2.17
CACNA1AO00555 AC244035.1-201ENST00000430042 390 ntBASIC1.51□□□□□ -2.17
CACNA1AO00555 AC244505.4-201ENST00000434905 287 ntBASIC1.51□□□□□ -2.17
CACNA1AO00555 SSXP5-201ENST00000443473 287 ntBASIC1.51□□□□□ -2.17
CACNA1AO00555 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.51□□□□□ -2.17
CACNA1AO00555 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC1.51□□□□□ -2.17
CACNA1AO00555 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.51□□□□□ -2.17
CACNA1AO00555 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
CACNA1AO00555 SNORA67.6-201ENST00000391093 99 ntBASIC1.5□□□□□ -2.17
CACNA1AO00555 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC1.5□□□□□ -2.17
CACNA1AO00555 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.5□□□□□ -2.17
CACNA1AO00555 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.5□□□□□ -2.17
CACNA1AO00555 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.5□□□□□ -2.17
CACNA1AO00555 RPS12P24-201ENST00000412619 387 ntBASIC1.5□□□□□ -2.17
CACNA1AO00555 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.5□□□□□ -2.17
CACNA1AO00555 GZMAP1-201ENST00000503054 631 ntBASIC1.5□□□□□ -2.17
CACNA1AO00555 FABP5P6-201ENST00000510588 409 ntBASIC1.5□□□□□ -2.17
CACNA1AO00555 RNU6-113P-201ENST00000516653 101 ntBASIC1.5□□□□□ -2.17
CACNA1AO00555 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC1.5□□□□□ -2.17
CACNA1AO00555 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC1.5□□□□□ -2.17
CACNA1AO00555 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.5□□□□□ -2.17
CACNA1AO00555 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.5□□□□□ -2.17
CACNA1AO00555 AL592437.2-201ENST00000421655 2434 ntBASIC1.5□□□□□ -2.17
CACNA1AO00555 SNORD114-15-201ENST00000364687 72 ntBASIC1.49□□□□□ -2.17
CACNA1AO00555 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.49□□□□□ -2.17
CACNA1AO00555 AL513185.2-201ENST00000425543 193 ntBASIC1.49□□□□□ -2.17
CACNA1AO00555 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.49□□□□□ -2.17
CACNA1AO00555 AC109486.1-201ENST00000486833 374 ntBASIC1.49□□□□□ -2.17
CACNA1AO00555 RNU4-60P-201ENST00000517239 135 ntBASIC1.49□□□□□ -2.17
CACNA1AO00555 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC1.49□□□□□ -2.17
CACNA1AO00555 AL121917.1-203ENST00000605534 577 ntBASIC1.49□□□□□ -2.17
CACNA1AO00555 AC012150.2-201ENST00000621300 544 ntBASIC1.49□□□□□ -2.17
CACNA1AO00555 USP9YP27-201ENST00000418455 438 ntBASIC1.49□□□□□ -2.17
CACNA1AO00555 RPS6P12-201ENST00000432491 726 ntBASIC1.49□□□□□ -2.17
CACNA1AO00555 HMGN2P18-201ENST00000450680 270 ntBASIC1.49□□□□□ -2.17
CACNA1AO00555 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.49□□□□□ -2.17
CACNA1AO00555 AGGF1P8-201ENST00000562979 1000 ntBASIC1.49□□□□□ -2.17
CACNA1AO00555 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.49□□□□□ -2.17
CACNA1AO00555 AC084035.1-201ENST00000634543 607 ntBASIC1.49□□□□□ -2.17
CACNA1AO00555 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC1.48□□□□□ -2.17
CACNA1AO00555 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC1.48□□□□□ -2.17
CACNA1AO00555 AP004242.1-201ENST00000533701 349 ntBASIC1.48□□□□□ -2.17
CACNA1AO00555 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC1.48□□□□□ -2.17
CACNA1AO00555 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
CACNA1AO00555 Y_RNA.25-201ENST00000362528 102 ntBASIC1.48□□□□□ -2.17
CACNA1AO00555 SAR1AP2-201ENST00000392696 594 ntBASIC1.48□□□□□ -2.17
CACNA1AO00555 MTCO1P43-201ENST00000431831 488 ntBASIC1.48□□□□□ -2.17
CACNA1AO00555 AL645568.3-201ENST00000433683 316 ntBASIC1.48□□□□□ -2.17
CACNA1AO00555 AL161651.1-201ENST00000440882 223 ntBASIC1.48□□□□□ -2.17
CACNA1AO00555 SNRPGP12-201ENST00000449481 213 ntBASIC1.48□□□□□ -2.17
CACNA1AO00555 RNU7-170P-201ENST00000459303 61 ntBASIC1.48□□□□□ -2.17
CACNA1AO00555 MTCO3P44-201ENST00000510977 541 ntBASIC1.48□□□□□ -2.17
CACNA1AO00555 MIR3618-201ENST00000580330 88 ntBASIC1.48□□□□□ -2.17
CACNA1AO00555 VIS1.1-201ENST00000610517 203 ntBASIC1.48□□□□□ -2.17
CACNA1AO00555 AC069234.5-201ENST00000611056 416 ntBASIC1.48□□□□□ -2.17
CACNA1AO00555 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
CACNA1AO00555 RNF6P1-201ENST00000444889 1784 ntBASIC1.48□□□□□ -2.17
CACNA1AO00555 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
CACNA1AO00555 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC1.47□□□□□ -2.17
CACNA1AO00555 HMGN1P14-201ENST00000412459 517 ntBASIC1.47□□□□□ -2.17
CACNA1AO00555 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.47□□□□□ -2.17
CACNA1AO00555 OFD1P13Y-201ENST00000431179 1232 ntBASIC1.47□□□□□ -2.17
CACNA1AO00555 AC129850.1-201ENST00000436203 508 ntBASIC1.47□□□□□ -2.17
CACNA1AO00555 AL157827.1-201ENST00000447622 132 ntBASIC1.47□□□□□ -2.17
CACNA1AO00555 RPS27AP10-201ENST00000496103 208 ntBASIC1.47□□□□□ -2.17
CACNA1AO00555 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC1.47□□□□□ -2.17
CACNA1AO00555 CBX3P8-201ENST00000532412 525 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms