Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.71□□□□□ -2.14
TRAV27A0A087WT01 MIR4448-201ENST00000584360 86 ntBASIC1.71□□□□□ -2.14
TRAV27A0A087WT01 AC068313.1-201ENST00000604028 1008 ntBASIC1.71□□□□□ -2.14
TRAV27A0A087WT01 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.71□□□□□ -2.14
TRAV27A0A087WT01 AL136981.2-201ENST00000617319 734 ntBASIC1.71□□□□□ -2.14
TRAV27A0A087WT01 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC1.71□□□□□ -2.14
TRAV27A0A087WT01 AC073968.1-201ENST00000618594 637 ntBASIC1.71□□□□□ -2.14
TRAV27A0A087WT01 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.71□□□□□ -2.14
TRAV27A0A087WT01 AL031601.2-202ENST00000622650 282 ntBASIC1.71□□□□□ -2.14
TRAV27A0A087WT01 LINC00216-201ENST00000623548 1126 ntBASIC1.71□□□□□ -2.14
TRAV27A0A087WT01 AC068620.4-201ENST00000636730 1182 ntBASIC1.71□□□□□ -2.14
TRAV27A0A087WT01 AC004944.1-201ENST00000517807 3059 ntBASIC1.71□□□□□ -2.14
TRAV27A0A087WT01 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.71□□□□□ -2.14
TRAV27A0A087WT01 AC111188.2-201ENST00000529697 1387 ntBASIC1.71□□□□□ -2.14
TRAV27A0A087WT01 ELF2P3-201ENST00000445099 1506 ntBASIC1.71□□□□□ -2.14
TRAV27A0A087WT01 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC1.7□□□□□ -2.14
TRAV27A0A087WT01 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
TRAV27A0A087WT01 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.7□□□□□ -2.14
TRAV27A0A087WT01 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.7□□□□□ -2.14
TRAV27A0A087WT01 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
TRAV27A0A087WT01 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
TRAV27A0A087WT01 RNU4-23P-201ENST00000362839 140 ntBASIC1.7□□□□□ -2.14
TRAV27A0A087WT01 SNORA38-201ENST00000363946 132 ntBASIC1.7□□□□□ -2.14
TRAV27A0A087WT01 SNORA68.1-201ENST00000364537 132 ntBASIC1.7□□□□□ -2.14
TRAV27A0A087WT01 RNU6-441P-201ENST00000384545 106 ntBASIC1.7□□□□□ -2.14
TRAV27A0A087WT01 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.7□□□□□ -2.14
TRAV27A0A087WT01 UBE2V1P9-201ENST00000414760 368 ntBASIC1.7□□□□□ -2.14
TRAV27A0A087WT01 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.7□□□□□ -2.14
TRAV27A0A087WT01 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.7□□□□□ -2.14
TRAV27A0A087WT01 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.7□□□□□ -2.14
TRAV27A0A087WT01 AL035410.1-201ENST00000427409 427 ntBASIC1.7□□□□□ -2.14
TRAV27A0A087WT01 EZH2P1-201ENST00000431167 291 ntBASIC1.7□□□□□ -2.14
TRAV27A0A087WT01 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.7□□□□□ -2.14
TRAV27A0A087WT01 AL022578.1-201ENST00000439330 1433 ntBASIC1.7□□□□□ -2.14
TRAV27A0A087WT01 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.7□□□□□ -2.14
TRAV27A0A087WT01 AC092685.1-201ENST00000447960 1243 ntBASIC1.7□□□□□ -2.14
TRAV27A0A087WT01 ANXA2P1-201ENST00000505539 926 ntBASIC1.7□□□□□ -2.14
TRAV27A0A087WT01 SNORA31.18-201ENST00000517043 134 ntBASIC1.7□□□□□ -2.14
TRAV27A0A087WT01 RNU6-889P-201ENST00000517189 103 ntBASIC1.7□□□□□ -2.14
TRAV27A0A087WT01 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC1.7□□□□□ -2.14
TRAV27A0A087WT01 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC1.7□□□□□ -2.14
TRAV27A0A087WT01 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.7□□□□□ -2.14
TRAV27A0A087WT01 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.7□□□□□ -2.14
TRAV27A0A087WT01 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC1.7□□□□□ -2.14
TRAV27A0A087WT01 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC1.7□□□□□ -2.14
TRAV27A0A087WT01 AC242628.1-201ENST00000606810 391 ntBASIC1.7□□□□□ -2.14
TRAV27A0A087WT01 ZNF658B-202ENST00000615961 3375 ntBASIC1.7□□□□□ -2.14
TRAV27A0A087WT01 AL353748.2-201ENST00000622148 471 ntBASIC1.7□□□□□ -2.14
TRAV27A0A087WT01 AC040168.1-201ENST00000623594 991 ntBASIC1.7□□□□□ -2.14
TRAV27A0A087WT01 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.7□□□□□ -2.14
TRAV27A0A087WT01 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.7□□□□□ -2.14
TRAV27A0A087WT01 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
TRAV27A0A087WT01 AC104454.1-201ENST00000421341 1401 ntBASIC1.69□□□□□ -2.14
TRAV27A0A087WT01 RNU6-543P-201ENST00000362576 108 ntBASIC1.69□□□□□ -2.14
TRAV27A0A087WT01 RNU6-444P-201ENST00000383988 108 ntBASIC1.69□□□□□ -2.14
TRAV27A0A087WT01 AP002784.2-201ENST00000397300 549 ntBASIC1.69□□□□□ -2.14
TRAV27A0A087WT01 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC1.69□□□□□ -2.14
TRAV27A0A087WT01 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.69□□□□□ -2.14
TRAV27A0A087WT01 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.69□□□□□ -2.14
TRAV27A0A087WT01 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC1.69□□□□□ -2.14
TRAV27A0A087WT01 RPL7L1P10-201ENST00000427790 463 ntBASIC1.69□□□□□ -2.14
TRAV27A0A087WT01 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.69□□□□□ -2.14
TRAV27A0A087WT01 OFD1P13Y-201ENST00000431179 1232 ntBASIC1.69□□□□□ -2.14
TRAV27A0A087WT01 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.69□□□□□ -2.14
TRAV27A0A087WT01 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.69□□□□□ -2.14
TRAV27A0A087WT01 ARPC3P1-201ENST00000437218 533 ntBASIC1.69□□□□□ -2.14
TRAV27A0A087WT01 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC1.69□□□□□ -2.14
TRAV27A0A087WT01 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC1.69□□□□□ -2.14
TRAV27A0A087WT01 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC1.69□□□□□ -2.14
TRAV27A0A087WT01 MTND2P19-201ENST00000449129 1012 ntBASIC1.69□□□□□ -2.14
TRAV27A0A087WT01 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.69□□□□□ -2.14
TRAV27A0A087WT01 AC104073.1-201ENST00000451988 151 ntBASIC1.69□□□□□ -2.14
TRAV27A0A087WT01 BX248409.1-201ENST00000455497 255 ntBASIC1.69□□□□□ -2.14
TRAV27A0A087WT01 PNPLA4P1-201ENST00000458328 305 ntBASIC1.69□□□□□ -2.14
TRAV27A0A087WT01 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.69□□□□□ -2.14
TRAV27A0A087WT01 AC097493.1-201ENST00000463958 372 ntBASIC1.69□□□□□ -2.14
TRAV27A0A087WT01 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.69□□□□□ -2.14
TRAV27A0A087WT01 UBE2DNL-203ENST00000474922 222 ntBASIC1.69□□□□□ -2.14
TRAV27A0A087WT01 OR52A4P-203ENST00000498233 1014 ntBASIC1.69□□□□□ -2.14
TRAV27A0A087WT01 RPL38P4-201ENST00000502376 214 ntBASIC1.69□□□□□ -2.14
TRAV27A0A087WT01 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC1.69□□□□□ -2.14
TRAV27A0A087WT01 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.69□□□□□ -2.14
TRAV27A0A087WT01 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC1.69□□□□□ -2.14
TRAV27A0A087WT01 AC084033.1-201ENST00000550830 633 ntBASIC1.69□□□□□ -2.14
TRAV27A0A087WT01 ANP32BP3-201ENST00000559213 706 ntBASIC1.69□□□□□ -2.14
TRAV27A0A087WT01 AC090888.1-201ENST00000561335 1141 ntBASIC1.69□□□□□ -2.14
TRAV27A0A087WT01 AC023824.2-201ENST00000566185 400 ntBASIC1.69□□□□□ -2.14
TRAV27A0A087WT01 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.69□□□□□ -2.14
TRAV27A0A087WT01 MIR4435-1-201ENST00000582552 80 ntBASIC1.69□□□□□ -2.14
TRAV27A0A087WT01 APOOP1-201ENST00000604695 592 ntBASIC1.69□□□□□ -2.14
TRAV27A0A087WT01 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.69□□□□□ -2.14
TRAV27A0A087WT01 AC005332.10-201ENST00000612725 619 ntBASIC1.69□□□□□ -2.14
TRAV27A0A087WT01 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC1.69□□□□□ -2.14
TRAV27A0A087WT01 uc_338.20-201ENST00000621563 178 ntBASIC1.69□□□□□ -2.14
TRAV27A0A087WT01 AC010149.2-201ENST00000637608 315 ntBASIC1.69□□□□□ -2.14
TRAV27A0A087WT01 AC017104.5-201ENST00000637647 639 ntBASIC1.69□□□□□ -2.14
TRAV27A0A087WT01 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
TRAV27A0A087WT01 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.69□□□□□ -2.14
TRAV27A0A087WT01 SNORA3A-201ENST00000364113 130 ntBASIC1.68□□□□□ -2.14
TRAV27A0A087WT01 SNORA16.1-201ENST00000364597 132 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms