Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 AC021755.1-201ENST00000559747 1447 ntBASIC3.84□□□□□ -1.79
PCDHGB3Q9Y5G1 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
PCDHGB3Q9Y5G1 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.83□□□□□ -1.8
PCDHGB3Q9Y5G1 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PCDHGB3Q9Y5G1 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
PCDHGB3Q9Y5G1 OR1S2-201ENST00000302592 978 ntBASIC3.83□□□□□ -1.8
PCDHGB3Q9Y5G1 HSPE1P11-201ENST00000339579 310 ntBASIC3.83□□□□□ -1.8
PCDHGB3Q9Y5G1 RNA5SP515-201ENST00000364570 118 ntBASIC3.83□□□□□ -1.8
PCDHGB3Q9Y5G1 RNU1-39P-201ENST00000383897 165 ntBASIC3.83□□□□□ -1.8
PCDHGB3Q9Y5G1 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PCDHGB3Q9Y5G1 RPL23AP32-201ENST00000395315 459 ntBASIC3.83□□□□□ -1.8
PCDHGB3Q9Y5G1 AL445189.1-201ENST00000405722 338 ntBASIC3.83□□□□□ -1.8
PCDHGB3Q9Y5G1 RNU2-33P-201ENST00000410344 192 ntBASIC3.83□□□□□ -1.8
PCDHGB3Q9Y5G1 RN7SKP33-201ENST00000410942 340 ntBASIC3.83□□□□□ -1.8
PCDHGB3Q9Y5G1 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.83□□□□□ -1.8
PCDHGB3Q9Y5G1 RPS15AP12-201ENST00000419498 388 ntBASIC3.83□□□□□ -1.8
PCDHGB3Q9Y5G1 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.83□□□□□ -1.8
PCDHGB3Q9Y5G1 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.83□□□□□ -1.8
PCDHGB3Q9Y5G1 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.83□□□□□ -1.8
PCDHGB3Q9Y5G1 Z82210.1-201ENST00000440037 231 ntBASIC3.83□□□□□ -1.8
PCDHGB3Q9Y5G1 AC092798.1-201ENST00000458542 409 ntBASIC3.83□□□□□ -1.8
PCDHGB3Q9Y5G1 RPL37P6-201ENST00000460682 294 ntBASIC3.83□□□□□ -1.8
PCDHGB3Q9Y5G1 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.83□□□□□ -1.8
PCDHGB3Q9Y5G1 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.83□□□□□ -1.8
PCDHGB3Q9Y5G1 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.83□□□□□ -1.8
PCDHGB3Q9Y5G1 OR8R1P-201ENST00000543943 764 ntBASIC3.83□□□□□ -1.8
PCDHGB3Q9Y5G1 AC011602.1-201ENST00000546484 331 ntBASIC3.83□□□□□ -1.8
PCDHGB3Q9Y5G1 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.83□□□□□ -1.8
PCDHGB3Q9Y5G1 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.83□□□□□ -1.8
PCDHGB3Q9Y5G1 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.83□□□□□ -1.8
PCDHGB3Q9Y5G1 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.83□□□□□ -1.8
PCDHGB3Q9Y5G1 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.83□□□□□ -1.8
PCDHGB3Q9Y5G1 VN1R85P-201ENST00000601587 426 ntBASIC3.83□□□□□ -1.8
PCDHGB3Q9Y5G1 SEPT7P9-203ENST00000604116 343 ntBASIC3.83□□□□□ -1.8
PCDHGB3Q9Y5G1 MIR486-1-201ENST00000612171 68 ntBASIC3.83□□□□□ -1.8
PCDHGB3Q9Y5G1 AC004696.1-201ENST00000614345 607 ntBASIC3.83□□□□□ -1.8
PCDHGB3Q9Y5G1 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.83□□□□□ -1.8
PCDHGB3Q9Y5G1 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.83□□□□□ -1.8
PCDHGB3Q9Y5G1 AC048344.4-201ENST00000619744 527 ntBASIC3.83□□□□□ -1.8
PCDHGB3Q9Y5G1 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PCDHGB3Q9Y5G1 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PCDHGB3Q9Y5G1 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
PCDHGB3Q9Y5G1 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.82□□□□□ -1.8
PCDHGB3Q9Y5G1 AC233263.6-201ENST00000631132 1963 ntBASIC3.82□□□□□ -1.8
PCDHGB3Q9Y5G1 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.82□□□□□ -1.8
PCDHGB3Q9Y5G1 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.82□□□□□ -1.8
PCDHGB3Q9Y5G1 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PCDHGB3Q9Y5G1 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.82□□□□□ -1.8
PCDHGB3Q9Y5G1 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PCDHGB3Q9Y5G1 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.82□□□□□ -1.8
PCDHGB3Q9Y5G1 RNU6-511P-201ENST00000363496 107 ntBASIC3.82□□□□□ -1.8
PCDHGB3Q9Y5G1 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.82□□□□□ -1.8
PCDHGB3Q9Y5G1 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.82□□□□□ -1.8
PCDHGB3Q9Y5G1 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.82□□□□□ -1.8
PCDHGB3Q9Y5G1 RPL23AP69-201ENST00000431134 458 ntBASIC3.82□□□□□ -1.8
PCDHGB3Q9Y5G1 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.82□□□□□ -1.8
PCDHGB3Q9Y5G1 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.82□□□□□ -1.8
PCDHGB3Q9Y5G1 MTCO2P16-201ENST00000436962 677 ntBASIC3.82□□□□□ -1.8
PCDHGB3Q9Y5G1 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.82□□□□□ -1.8
PCDHGB3Q9Y5G1 AC140076.1-201ENST00000449897 361 ntBASIC3.82□□□□□ -1.8
PCDHGB3Q9Y5G1 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.82□□□□□ -1.8
PCDHGB3Q9Y5G1 AL160314.1-201ENST00000490836 438 ntBASIC3.82□□□□□ -1.8
PCDHGB3Q9Y5G1 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.82□□□□□ -1.8
PCDHGB3Q9Y5G1 AC010424.1-201ENST00000506336 297 ntBASIC3.82□□□□□ -1.8
PCDHGB3Q9Y5G1 MTND4P2-201ENST00000507767 1203 ntBASIC3.82□□□□□ -1.8
PCDHGB3Q9Y5G1 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.82□□□□□ -1.8
PCDHGB3Q9Y5G1 AC093824.1-201ENST00000508796 343 ntBASIC3.82□□□□□ -1.8
PCDHGB3Q9Y5G1 NDUFB4P2-201ENST00000509515 391 ntBASIC3.82□□□□□ -1.8
PCDHGB3Q9Y5G1 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.82□□□□□ -1.8
PCDHGB3Q9Y5G1 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.82□□□□□ -1.8
PCDHGB3Q9Y5G1 RNU7-143P-201ENST00000516781 65 ntBASIC3.82□□□□□ -1.8
PCDHGB3Q9Y5G1 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.82□□□□□ -1.8
PCDHGB3Q9Y5G1 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.82□□□□□ -1.8
PCDHGB3Q9Y5G1 GNRHR2P1-201ENST00000555315 631 ntBASIC3.82□□□□□ -1.8
PCDHGB3Q9Y5G1 AC137800.2-201ENST00000574375 120 ntBASIC3.82□□□□□ -1.8
PCDHGB3Q9Y5G1 AC005951.2-201ENST00000576282 495 ntBASIC3.82□□□□□ -1.8
PCDHGB3Q9Y5G1 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.82□□□□□ -1.8
PCDHGB3Q9Y5G1 HMGN1P30-201ENST00000589286 268 ntBASIC3.82□□□□□ -1.8
PCDHGB3Q9Y5G1 AC174048.1-201ENST00000603389 144 ntBASIC3.82□□□□□ -1.8
PCDHGB3Q9Y5G1 AC067959.1-201ENST00000604334 379 ntBASIC3.82□□□□□ -1.8
PCDHGB3Q9Y5G1 AC245008.1-201ENST00000608123 476 ntBASIC3.82□□□□□ -1.8
PCDHGB3Q9Y5G1 AC244100.1-202ENST00000621554 382 ntBASIC3.82□□□□□ -1.8
PCDHGB3Q9Y5G1 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.82□□□□□ -1.8
PCDHGB3Q9Y5G1 AL136313.1-201ENST00000624804 202 ntBASIC3.82□□□□□ -1.8
PCDHGB3Q9Y5G1 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PCDHGB3Q9Y5G1 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
PCDHGB3Q9Y5G1 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.82□□□□□ -1.8
PCDHGB3Q9Y5G1 ZNF826P-207ENST00000622273 1910 ntBASIC3.82□□□□□ -1.8
PCDHGB3Q9Y5G1 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.81□□□□□ -1.8
PCDHGB3Q9Y5G1 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
PCDHGB3Q9Y5G1 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PCDHGB3Q9Y5G1 AL390237.1-201ENST00000404226 1415 ntBASIC3.81□□□□□ -1.8
PCDHGB3Q9Y5G1 IPO8P1-201ENST00000455509 3109 ntBASIC3.81□□□□□ -1.8
PCDHGB3Q9Y5G1 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
PCDHGB3Q9Y5G1 SNORD35B-201ENST00000363660 87 ntBASIC3.81□□□□□ -1.8
PCDHGB3Q9Y5G1 RNY1P12-201ENST00000364251 105 ntBASIC3.81□□□□□ -1.8
PCDHGB3Q9Y5G1 RNA5SP479-201ENST00000364858 117 ntBASIC3.81□□□□□ -1.8
PCDHGB3Q9Y5G1 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PCDHGB3Q9Y5G1 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
PCDHGB3Q9Y5G1 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms