Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 RNU6ATAC-201ENST00000408749 126 ntBASIC4.72□□□□□ -1.65
CTDP1Q9Y5B0 RNA5SP118-201ENST00000410385 109 ntBASIC4.72□□□□□ -1.65
CTDP1Q9Y5B0 MRPL50P2-201ENST00000416821 482 ntBASIC4.72□□□□□ -1.65
CTDP1Q9Y5B0 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.72□□□□□ -1.65
CTDP1Q9Y5B0 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.72□□□□□ -1.65
CTDP1Q9Y5B0 AC119618.1-201ENST00000434191 222 ntBASIC4.72□□□□□ -1.65
CTDP1Q9Y5B0 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.72□□□□□ -1.65
CTDP1Q9Y5B0 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.72□□□□□ -1.65
CTDP1Q9Y5B0 FDX1P2-201ENST00000450769 375 ntBASIC4.72□□□□□ -1.65
CTDP1Q9Y5B0 AP1S2P1-201ENST00000457344 379 ntBASIC4.72□□□□□ -1.65
CTDP1Q9Y5B0 RPS20P20-201ENST00000460498 340 ntBASIC4.72□□□□□ -1.65
CTDP1Q9Y5B0 AC025445.1-201ENST00000502728 300 ntBASIC4.72□□□□□ -1.65
CTDP1Q9Y5B0 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.72□□□□□ -1.65
CTDP1Q9Y5B0 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.72□□□□□ -1.65
CTDP1Q9Y5B0 NAF1-205ENST00000509434 385 ntTSL 3 BASIC4.72□□□□□ -1.65
CTDP1Q9Y5B0 PANCR-202ENST00000513690 448 ntTSL 2 BASIC4.72□□□□□ -1.65
CTDP1Q9Y5B0 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC4.72□□□□□ -1.65
CTDP1Q9Y5B0 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.72□□□□□ -1.65
CTDP1Q9Y5B0 ARL2BPP2-201ENST00000550907 489 ntBASIC4.72□□□□□ -1.65
CTDP1Q9Y5B0 MIR5685-201ENST00000579080 79 ntBASIC4.72□□□□□ -1.65
CTDP1Q9Y5B0 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.72□□□□□ -1.65
CTDP1Q9Y5B0 AL592436.1-201ENST00000605135 558 ntBASIC4.72□□□□□ -1.65
CTDP1Q9Y5B0 MIR92B-201ENST00000607575 96 ntBASIC4.72□□□□□ -1.65
CTDP1Q9Y5B0 AC064836.2-201ENST00000609491 462 ntBASIC4.72□□□□□ -1.65
CTDP1Q9Y5B0 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.72□□□□□ -1.65
CTDP1Q9Y5B0 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.72□□□□□ -1.65
CTDP1Q9Y5B0 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.72□□□□□ -1.65
CTDP1Q9Y5B0 CYP3A51P-201ENST00000633513 256 ntBASIC4.72□□□□□ -1.65
CTDP1Q9Y5B0 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
CTDP1Q9Y5B0 AC024614.3-201ENST00000637860 256 ntBASIC4.72□□□□□ -1.65
CTDP1Q9Y5B0 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CTDP1Q9Y5B0 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CTDP1Q9Y5B0 AC092447.10-201ENST00000620607 1652 ntBASIC4.72□□□□□ -1.65
CTDP1Q9Y5B0 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.72□□□□□ -1.65
CTDP1Q9Y5B0 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CTDP1Q9Y5B0 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.72□□□□□ -1.65
CTDP1Q9Y5B0 OTUD4P1-201ENST00000237841 3067 ntBASIC4.72□□□□□ -1.65
CTDP1Q9Y5B0 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CTDP1Q9Y5B0 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CTDP1Q9Y5B0 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CTDP1Q9Y5B0 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CTDP1Q9Y5B0 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CTDP1Q9Y5B0 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.71□□□□□ -1.65
CTDP1Q9Y5B0 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.71□□□□□ -1.65
CTDP1Q9Y5B0 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CTDP1Q9Y5B0 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.71□□□□□ -1.66
CTDP1Q9Y5B0 AC116096.1-201ENST00000566804 2314 ntBASIC4.71□□□□□ -1.66
CTDP1Q9Y5B0 Y_RNA.72-201ENST00000362894 103 ntBASIC4.71□□□□□ -1.66
CTDP1Q9Y5B0 RNA5SP189-201ENST00000364920 115 ntBASIC4.71□□□□□ -1.66
CTDP1Q9Y5B0 Y_RNA.381-201ENST00000365666 102 ntBASIC4.71□□□□□ -1.66
CTDP1Q9Y5B0 Y_RNA.529-201ENST00000384586 119 ntBASIC4.71□□□□□ -1.66
CTDP1Q9Y5B0 AL590704.1-201ENST00000402856 794 ntBASIC4.71□□□□□ -1.66
CTDP1Q9Y5B0 AL356421.1-201ENST00000403255 413 ntBASIC4.71□□□□□ -1.66
CTDP1Q9Y5B0 RN7SKP167-201ENST00000411047 285 ntBASIC4.71□□□□□ -1.66
CTDP1Q9Y5B0 OR9R1P-201ENST00000412200 877 ntBASIC4.71□□□□□ -1.66
CTDP1Q9Y5B0 EI24P1-201ENST00000416584 867 ntBASIC4.71□□□□□ -1.66
CTDP1Q9Y5B0 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.71□□□□□ -1.66
CTDP1Q9Y5B0 AC008850.1-201ENST00000427546 362 ntBASIC4.71□□□□□ -1.66
CTDP1Q9Y5B0 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.71□□□□□ -1.66
CTDP1Q9Y5B0 AL590399.6-201ENST00000446396 307 ntBASIC4.71□□□□□ -1.66
CTDP1Q9Y5B0 RN7SL542P-201ENST00000467147 294 ntBASIC4.71□□□□□ -1.66
CTDP1Q9Y5B0 AC083798.1-201ENST00000472671 131 ntBASIC4.71□□□□□ -1.66
CTDP1Q9Y5B0 TXNP6-201ENST00000510190 310 ntBASIC4.71□□□□□ -1.66
CTDP1Q9Y5B0 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.71□□□□□ -1.66
CTDP1Q9Y5B0 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.71□□□□□ -1.66
CTDP1Q9Y5B0 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.71□□□□□ -1.66
CTDP1Q9Y5B0 AC125611.2-201ENST00000551907 647 ntBASIC4.71□□□□□ -1.66
CTDP1Q9Y5B0 AC009101.1-201ENST00000568135 242 ntBASIC4.71□□□□□ -1.66
CTDP1Q9Y5B0 MIR3167-201ENST00000579623 85 ntBASIC4.71□□□□□ -1.66
CTDP1Q9Y5B0 MIR3118-1-201ENST00000581787 76 ntBASIC4.71□□□□□ -1.66
CTDP1Q9Y5B0 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.71□□□□□ -1.66
CTDP1Q9Y5B0 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.71□□□□□ -1.66
CTDP1Q9Y5B0 AC011712.1-201ENST00000588959 234 ntBASIC4.71□□□□□ -1.66
CTDP1Q9Y5B0 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.71□□□□□ -1.66
CTDP1Q9Y5B0 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.71□□□□□ -1.66
CTDP1Q9Y5B0 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.71□□□□□ -1.66
CTDP1Q9Y5B0 AC245389.1-201ENST00000605141 529 ntBASIC4.71□□□□□ -1.66
CTDP1Q9Y5B0 AC091953.2-201ENST00000623979 160 ntBASIC4.71□□□□□ -1.66
CTDP1Q9Y5B0 AC006026.1-201ENST00000444025 1803 ntBASIC4.71□□□□□ -1.66
CTDP1Q9Y5B0 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CTDP1Q9Y5B0 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
CTDP1Q9Y5B0 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CTDP1Q9Y5B0 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.66
CTDP1Q9Y5B0 MTND5P28-201ENST00000438005 1594 ntBASIC4.7□□□□□ -1.66
CTDP1Q9Y5B0 CKAP2P1-201ENST00000555477 2049 ntBASIC4.7□□□□□ -1.66
CTDP1Q9Y5B0 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CTDP1Q9Y5B0 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CTDP1Q9Y5B0 RNU6-451P-201ENST00000362921 107 ntBASIC4.7□□□□□ -1.66
CTDP1Q9Y5B0 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CTDP1Q9Y5B0 RPS4XP8-201ENST00000402039 771 ntBASIC4.7□□□□□ -1.66
CTDP1Q9Y5B0 AL356057.2-201ENST00000403318 432 ntBASIC4.7□□□□□ -1.66
CTDP1Q9Y5B0 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.7□□□□□ -1.66
CTDP1Q9Y5B0 RPS20P15-201ENST00000412792 311 ntBASIC4.7□□□□□ -1.66
CTDP1Q9Y5B0 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.7□□□□□ -1.66
CTDP1Q9Y5B0 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.7□□□□□ -1.66
CTDP1Q9Y5B0 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC4.7□□□□□ -1.66
CTDP1Q9Y5B0 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.7□□□□□ -1.66
CTDP1Q9Y5B0 AL138799.3-201ENST00000438968 350 ntBASIC4.7□□□□□ -1.66
CTDP1Q9Y5B0 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.7□□□□□ -1.66
CTDP1Q9Y5B0 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms