Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 SNORD37.2-201ENST00000391075 66 ntBASIC6.03□□□□□ -1.44
VPS9D1Q9Y2B5 UBA52P6-201ENST00000399822 382 ntBASIC6.03□□□□□ -1.44
VPS9D1Q9Y2B5 RNY4P30-201ENST00000410216 95 ntBASIC6.03□□□□□ -1.44
VPS9D1Q9Y2B5 ELOCP19-201ENST00000411919 318 ntBASIC6.03□□□□□ -1.44
VPS9D1Q9Y2B5 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.03□□□□□ -1.44
VPS9D1Q9Y2B5 AL138899.2-201ENST00000439139 499 ntBASIC6.03□□□□□ -1.44
VPS9D1Q9Y2B5 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC6.03□□□□□ -1.44
VPS9D1Q9Y2B5 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC6.03□□□□□ -1.44
VPS9D1Q9Y2B5 AC016027.4-201ENST00000450866 277 ntBASIC6.03□□□□□ -1.44
VPS9D1Q9Y2B5 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC6.03□□□□□ -1.44
VPS9D1Q9Y2B5 RPL21P126-201ENST00000470049 478 ntBASIC6.03□□□□□ -1.44
VPS9D1Q9Y2B5 RPL21P13-201ENST00000488305 481 ntBASIC6.03□□□□□ -1.44
VPS9D1Q9Y2B5 AC113367.2-201ENST00000505749 160 ntBASIC6.03□□□□□ -1.44
VPS9D1Q9Y2B5 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC6.03□□□□□ -1.44
VPS9D1Q9Y2B5 AC006499.6-201ENST00000511169 607 ntBASIC6.03□□□□□ -1.44
VPS9D1Q9Y2B5 SNORA70.11-201ENST00000515987 138 ntBASIC6.03□□□□□ -1.44
VPS9D1Q9Y2B5 SNORA70.13-201ENST00000516116 138 ntBASIC6.03□□□□□ -1.44
VPS9D1Q9Y2B5 RNU6-1315P-201ENST00000517187 99 ntBASIC6.03□□□□□ -1.44
VPS9D1Q9Y2B5 AC008694.2-201ENST00000517591 306 ntBASIC6.03□□□□□ -1.44
VPS9D1Q9Y2B5 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.03□□□□□ -1.44
VPS9D1Q9Y2B5 NDUFA5P6-201ENST00000542110 379 ntBASIC6.03□□□□□ -1.44
VPS9D1Q9Y2B5 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC6.03□□□□□ -1.44
VPS9D1Q9Y2B5 HMGN2P47-201ENST00000559378 272 ntBASIC6.03□□□□□ -1.44
VPS9D1Q9Y2B5 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC6.03□□□□□ -1.44
VPS9D1Q9Y2B5 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC6.03□□□□□ -1.44
VPS9D1Q9Y2B5 AL499605.1-201ENST00000604628 403 ntBASIC6.03□□□□□ -1.44
VPS9D1Q9Y2B5 RMST_6.1-201ENST00000611980 203 ntBASIC6.03□□□□□ -1.44
VPS9D1Q9Y2B5 AP001340.1-201ENST00000624405 217 ntBASIC6.03□□□□□ -1.44
VPS9D1Q9Y2B5 SCARNA4-201ENST00000629045 128 ntBASIC6.03□□□□□ -1.44
VPS9D1Q9Y2B5 5S_rRNA.29-201ENST00000641250 107 ntBASIC6.03□□□□□ -1.44
VPS9D1Q9Y2B5 AP002512.4-202ENST00000641599 4530 ntBASIC6.03□□□□□ -1.44
VPS9D1Q9Y2B5 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
VPS9D1Q9Y2B5 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.03□□□□□ -1.44
VPS9D1Q9Y2B5 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
VPS9D1Q9Y2B5 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
VPS9D1Q9Y2B5 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
VPS9D1Q9Y2B5 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
VPS9D1Q9Y2B5 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
VPS9D1Q9Y2B5 AC022325.1-201ENST00000502748 2199 ntBASIC6.03□□□□□ -1.44
VPS9D1Q9Y2B5 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
VPS9D1Q9Y2B5 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.02□□□□□ -1.44
VPS9D1Q9Y2B5 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
VPS9D1Q9Y2B5 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
VPS9D1Q9Y2B5 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.02□□□□□ -1.45
VPS9D1Q9Y2B5 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
VPS9D1Q9Y2B5 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
VPS9D1Q9Y2B5 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
VPS9D1Q9Y2B5 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.02□□□□□ -1.45
VPS9D1Q9Y2B5 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
VPS9D1Q9Y2B5 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
VPS9D1Q9Y2B5 RNU4-80P-201ENST00000363200 141 ntBASIC6.02□□□□□ -1.45
VPS9D1Q9Y2B5 Y_RNA.116-201ENST00000363292 103 ntBASIC6.02□□□□□ -1.45
VPS9D1Q9Y2B5 RNU6-384P-201ENST00000364900 104 ntBASIC6.02□□□□□ -1.45
VPS9D1Q9Y2B5 SNORA77.2-201ENST00000408571 112 ntBASIC6.02□□□□□ -1.45
VPS9D1Q9Y2B5 AL096829.1-201ENST00000413677 457 ntBASIC6.02□□□□□ -1.45
VPS9D1Q9Y2B5 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.02□□□□□ -1.45
VPS9D1Q9Y2B5 COX6B1P7-201ENST00000430845 235 ntBASIC6.02□□□□□ -1.45
VPS9D1Q9Y2B5 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC6.02□□□□□ -1.45
VPS9D1Q9Y2B5 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.02□□□□□ -1.45
VPS9D1Q9Y2B5 RN7SL254P-201ENST00000460609 284 ntBASIC6.02□□□□□ -1.45
VPS9D1Q9Y2B5 AP000870.1-201ENST00000472927 406 ntBASIC6.02□□□□□ -1.45
VPS9D1Q9Y2B5 RPL31P61-201ENST00000496160 376 ntBASIC6.02□□□□□ -1.45
VPS9D1Q9Y2B5 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC6.02□□□□□ -1.45
VPS9D1Q9Y2B5 AC005476.1-201ENST00000554427 397 ntBASIC6.02□□□□□ -1.45
VPS9D1Q9Y2B5 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC6.02□□□□□ -1.45
VPS9D1Q9Y2B5 AC107958.1-201ENST00000556576 290 ntBASIC6.02□□□□□ -1.45
VPS9D1Q9Y2B5 AC090877.1-201ENST00000561418 344 ntBASIC6.02□□□□□ -1.45
VPS9D1Q9Y2B5 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.02□□□□□ -1.45
VPS9D1Q9Y2B5 uc_338.29-201ENST00000615099 168 ntBASIC6.02□□□□□ -1.45
VPS9D1Q9Y2B5 AL161629.2-201ENST00000615347 275 ntBASIC6.02□□□□□ -1.45
VPS9D1Q9Y2B5 FAM27E2-201ENST00000619668 403 ntBASIC6.02□□□□□ -1.45
VPS9D1Q9Y2B5 MIR4275-201ENST00000636486 87 ntBASIC6.02□□□□□ -1.45
VPS9D1Q9Y2B5 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC6.02□□□□□ -1.45
VPS9D1Q9Y2B5 IQCB2P-201ENST00000401788 1633 ntBASIC6.02□□□□□ -1.45
VPS9D1Q9Y2B5 AC009812.4-201ENST00000569134 1805 ntBASIC6.02□□□□□ -1.45
VPS9D1Q9Y2B5 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
VPS9D1Q9Y2B5 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.01□□□□□ -1.45
VPS9D1Q9Y2B5 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
VPS9D1Q9Y2B5 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.01□□□□□ -1.45
VPS9D1Q9Y2B5 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
VPS9D1Q9Y2B5 MFSD8-219ENST00000641228 2559 ntBASIC6.01□□□□□ -1.45
VPS9D1Q9Y2B5 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.01□□□□□ -1.45
VPS9D1Q9Y2B5 RNU6-395P-201ENST00000365662 106 ntBASIC6.01□□□□□ -1.45
VPS9D1Q9Y2B5 RNU6-213P-201ENST00000384051 104 ntBASIC6.01□□□□□ -1.45
VPS9D1Q9Y2B5 Y_RNA.495-201ENST00000384435 112 ntBASIC6.01□□□□□ -1.45
VPS9D1Q9Y2B5 MIR137-201ENST00000385223 102 ntBASIC6.01□□□□□ -1.45
VPS9D1Q9Y2B5 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
VPS9D1Q9Y2B5 RNU6-578P-201ENST00000390980 103 ntBASIC6.01□□□□□ -1.45
VPS9D1Q9Y2B5 CYB5AP4-201ENST00000396692 399 ntBASIC6.01□□□□□ -1.45
VPS9D1Q9Y2B5 RNU2-21P-201ENST00000410368 188 ntBASIC6.01□□□□□ -1.45
VPS9D1Q9Y2B5 PLA2G12AP2-201ENST00000424744 264 ntBASIC6.01□□□□□ -1.45
VPS9D1Q9Y2B5 AL592045.1-201ENST00000429867 352 ntBASIC6.01□□□□□ -1.45
VPS9D1Q9Y2B5 RPS15AP5-201ENST00000436276 388 ntBASIC6.01□□□□□ -1.45
VPS9D1Q9Y2B5 AC005042.3-201ENST00000453230 174 ntBASIC6.01□□□□□ -1.45
VPS9D1Q9Y2B5 PPIAP7-201ENST00000454070 489 ntBASIC6.01□□□□□ -1.45
VPS9D1Q9Y2B5 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC6.01□□□□□ -1.45
VPS9D1Q9Y2B5 AC104339.1-201ENST00000465478 348 ntBASIC6.01□□□□□ -1.45
VPS9D1Q9Y2B5 TRBV5-2-201ENST00000489095 273 ntBASIC6.01□□□□□ -1.45
VPS9D1Q9Y2B5 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
VPS9D1Q9Y2B5 RN7SL568P-201ENST00000493069 298 ntBASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms