Protein–RNA interactions for Protein: Q9UHB6

LIMA1, LIM domain and actin-binding protein 1, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1Q9UHB6 COX6CP3-201ENST00000580869 223 ntBASIC3.65□□□□□ -1.83
LIMA1Q9UHB6 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.65□□□□□ -1.83
LIMA1Q9UHB6 AC105224.1-201ENST00000587055 421 ntBASIC3.65□□□□□ -1.83
LIMA1Q9UHB6 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.65□□□□□ -1.83
LIMA1Q9UHB6 U73023.1-201ENST00000603134 700 ntBASIC3.65□□□□□ -1.83
LIMA1Q9UHB6 AC106900.2-201ENST00000604994 317 ntBASIC3.65□□□□□ -1.83
LIMA1Q9UHB6 OR2AS2P-201ENST00000606902 342 ntBASIC3.65□□□□□ -1.83
LIMA1Q9UHB6 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.65□□□□□ -1.83
LIMA1Q9UHB6 AC004908.2-201ENST00000609090 574 ntBASIC3.65□□□□□ -1.83
LIMA1Q9UHB6 AL355472.4-201ENST00000610233 626 ntBASIC3.65□□□□□ -1.83
LIMA1Q9UHB6 AL121772.2-201ENST00000614331 297 ntBASIC3.65□□□□□ -1.83
LIMA1Q9UHB6 AL603758.1-201ENST00000618654 241 ntBASIC3.65□□□□□ -1.83
LIMA1Q9UHB6 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.65□□□□□ -1.83
LIMA1Q9UHB6 AC009093.8-201ENST00000641769 292 ntBASIC3.65□□□□□ -1.83
LIMA1Q9UHB6 AL138713.1-201ENST00000624026 2130 ntBASIC3.65□□□□□ -1.83
LIMA1Q9UHB6 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
LIMA1Q9UHB6 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
LIMA1Q9UHB6 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
LIMA1Q9UHB6 AC004972.1-201ENST00000623934 2209 ntBASIC3.64□□□□□ -1.83
LIMA1Q9UHB6 DDX10P1-201ENST00000448545 1933 ntBASIC3.64□□□□□ -1.83
LIMA1Q9UHB6 ELL2P3-201ENST00000457883 1602 ntBASIC3.64□□□□□ -1.83
LIMA1Q9UHB6 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.64□□□□□ -1.83
LIMA1Q9UHB6 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.64□□□□□ -1.83
LIMA1Q9UHB6 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.64□□□□□ -1.83
LIMA1Q9UHB6 ATP5C1P1-201ENST00000441945 895 ntBASIC3.64□□□□□ -1.83
LIMA1Q9UHB6 AL592447.1-201ENST00000447592 540 ntBASIC3.64□□□□□ -1.83
LIMA1Q9UHB6 Z99127.3-201ENST00000448158 395 ntBASIC3.64□□□□□ -1.83
LIMA1Q9UHB6 AL590365.1-201ENST00000450788 243 ntBASIC3.64□□□□□ -1.83
LIMA1Q9UHB6 AC025518.1-201ENST00000479856 347 ntBASIC3.64□□□□□ -1.83
LIMA1Q9UHB6 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.64□□□□□ -1.83
LIMA1Q9UHB6 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.64□□□□□ -1.83
LIMA1Q9UHB6 AC105313.1-201ENST00000509121 353 ntBASIC3.64□□□□□ -1.83
LIMA1Q9UHB6 FCF1P8-201ENST00000510322 597 ntBASIC3.64□□□□□ -1.83
LIMA1Q9UHB6 AC104619.4-201ENST00000510773 249 ntBASIC3.64□□□□□ -1.83
LIMA1Q9UHB6 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.64□□□□□ -1.83
LIMA1Q9UHB6 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.64□□□□□ -1.83
LIMA1Q9UHB6 RNU1-95P-201ENST00000516357 160 ntBASIC3.64□□□□□ -1.83
LIMA1Q9UHB6 RNU1-128P-201ENST00000516704 160 ntBASIC3.64□□□□□ -1.83
LIMA1Q9UHB6 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.64□□□□□ -1.83
LIMA1Q9UHB6 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.64□□□□□ -1.83
LIMA1Q9UHB6 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.64□□□□□ -1.83
LIMA1Q9UHB6 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.64□□□□□ -1.83
LIMA1Q9UHB6 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.64□□□□□ -1.83
LIMA1Q9UHB6 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.64□□□□□ -1.83
LIMA1Q9UHB6 AC015917.1-201ENST00000579654 510 ntBASIC3.64□□□□□ -1.83
LIMA1Q9UHB6 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.64□□□□□ -1.83
LIMA1Q9UHB6 MIR548AB-201ENST00000584917 84 ntBASIC3.64□□□□□ -1.83
LIMA1Q9UHB6 AC010620.1-201ENST00000601088 1102 ntBASIC3.64□□□□□ -1.83
LIMA1Q9UHB6 Z94722.1-201ENST00000604328 474 ntBASIC3.64□□□□□ -1.83
LIMA1Q9UHB6 AC007038.2-201ENST00000608095 740 ntBASIC3.64□□□□□ -1.83
LIMA1Q9UHB6 AP002826.1-201ENST00000608835 315 ntBASIC3.64□□□□□ -1.83
LIMA1Q9UHB6 AC073114.1-201ENST00000612027 490 ntBASIC3.64□□□□□ -1.83
LIMA1Q9UHB6 uc_338.1-201ENST00000612113 180 ntBASIC3.64□□□□□ -1.83
LIMA1Q9UHB6 AL110115.1-201ENST00000614396 364 ntBASIC3.64□□□□□ -1.83
LIMA1Q9UHB6 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.64□□□□□ -1.83
LIMA1Q9UHB6 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.64□□□□□ -1.83
LIMA1Q9UHB6 MIR4275-201ENST00000636486 87 ntBASIC3.64□□□□□ -1.83
LIMA1Q9UHB6 AP003399.1-201ENST00000637534 361 ntBASIC3.64□□□□□ -1.83
LIMA1Q9UHB6 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
LIMA1Q9UHB6 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.63□□□□□ -1.83
LIMA1Q9UHB6 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.63□□□□□ -1.83
LIMA1Q9UHB6 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
LIMA1Q9UHB6 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
LIMA1Q9UHB6 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
LIMA1Q9UHB6 MIR1193-201ENST00000408109 78 ntBASIC3.63□□□□□ -1.83
LIMA1Q9UHB6 RNA5SP229-201ENST00000410809 99 ntBASIC3.63□□□□□ -1.83
LIMA1Q9UHB6 HMGN1P24-201ENST00000412282 298 ntBASIC3.63□□□□□ -1.83
LIMA1Q9UHB6 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.63□□□□□ -1.83
LIMA1Q9UHB6 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.63□□□□□ -1.83
LIMA1Q9UHB6 AL365338.1-201ENST00000422282 858 ntBASIC3.63□□□□□ -1.83
LIMA1Q9UHB6 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.63□□□□□ -1.83
LIMA1Q9UHB6 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.63□□□□□ -1.83
LIMA1Q9UHB6 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.63□□□□□ -1.83
LIMA1Q9UHB6 CST9LP2-201ENST00000437612 320 ntBASIC3.63□□□□□ -1.83
LIMA1Q9UHB6 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.63□□□□□ -1.83
LIMA1Q9UHB6 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.63□□□□□ -1.83
LIMA1Q9UHB6 AL162389.1-201ENST00000449233 177 ntBASIC3.63□□□□□ -1.83
LIMA1Q9UHB6 CFTRP1-201ENST00000456646 183 ntBASIC3.63□□□□□ -1.83
LIMA1Q9UHB6 ACTR3P3-201ENST00000480448 893 ntBASIC3.63□□□□□ -1.83
LIMA1Q9UHB6 AC114967.1-201ENST00000504890 259 ntBASIC3.63□□□□□ -1.83
LIMA1Q9UHB6 SNORA70.16-201ENST00000516390 95 ntBASIC3.63□□□□□ -1.83
LIMA1Q9UHB6 RNU6-201P-201ENST00000517100 61 ntBASIC3.63□□□□□ -1.83
LIMA1Q9UHB6 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.63□□□□□ -1.83
LIMA1Q9UHB6 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.63□□□□□ -1.83
LIMA1Q9UHB6 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.63□□□□□ -1.83
LIMA1Q9UHB6 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
LIMA1Q9UHB6 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.63□□□□□ -1.83
LIMA1Q9UHB6 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.63□□□□□ -1.83
LIMA1Q9UHB6 AL133153.1-201ENST00000557756 303 ntBASIC3.63□□□□□ -1.83
LIMA1Q9UHB6 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.63□□□□□ -1.83
LIMA1Q9UHB6 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.63□□□□□ -1.83
LIMA1Q9UHB6 ACTR3BP3-201ENST00000565577 979 ntBASIC3.63□□□□□ -1.83
LIMA1Q9UHB6 AL356432.3-201ENST00000568952 465 ntBASIC3.63□□□□□ -1.83
LIMA1Q9UHB6 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.63□□□□□ -1.83
LIMA1Q9UHB6 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.63□□□□□ -1.83
LIMA1Q9UHB6 AL031985.2-201ENST00000600955 480 ntBASIC3.63□□□□□ -1.83
LIMA1Q9UHB6 AC080013.6-201ENST00000606185 215 ntBASIC3.63□□□□□ -1.83
LIMA1Q9UHB6 AC093838.1-201ENST00000613014 469 ntBASIC3.63□□□□□ -1.83
LIMA1Q9UHB6 AC009159.1-201ENST00000618386 642 ntBASIC3.63□□□□□ -1.83
LIMA1Q9UHB6 AL731566.2-201ENST00000618971 317 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms