Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.46□□□□□ -2.18
CHD8Q9HCK8 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
CHD8Q9HCK8 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC1.45□□□□□ -2.18
CHD8Q9HCK8 AC009902.3-201ENST00000606235 2172 ntBASIC1.45□□□□□ -2.18
CHD8Q9HCK8 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.45□□□□□ -2.18
CHD8Q9HCK8 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.45□□□□□ -2.18
CHD8Q9HCK8 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC1.45□□□□□ -2.18
CHD8Q9HCK8 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC1.45□□□□□ -2.18
CHD8Q9HCK8 CKS1BP5-201ENST00000434172 273 ntBASIC1.45□□□□□ -2.18
CHD8Q9HCK8 AC129850.1-201ENST00000436203 508 ntBASIC1.45□□□□□ -2.18
CHD8Q9HCK8 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC1.45□□□□□ -2.18
CHD8Q9HCK8 AL161713.1-201ENST00000555538 145 ntBASIC1.45□□□□□ -2.18
CHD8Q9HCK8 RPL23AP78-201ENST00000599928 470 ntBASIC1.45□□□□□ -2.18
CHD8Q9HCK8 AL137072.1-201ENST00000603444 466 ntBASIC1.45□□□□□ -2.18
CHD8Q9HCK8 AC107294.3-201ENST00000609211 526 ntBASIC1.45□□□□□ -2.18
CHD8Q9HCK8 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.45□□□□□ -2.18
CHD8Q9HCK8 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
CHD8Q9HCK8 ICE2P2-201ENST00000483823 2787 ntBASIC1.45□□□□□ -2.18
CHD8Q9HCK8 Y_RNA.280-201ENST00000364765 112 ntBASIC1.45□□□□□ -2.18
CHD8Q9HCK8 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.45□□□□□ -2.18
CHD8Q9HCK8 HMGN2P18-201ENST00000450680 270 ntBASIC1.45□□□□□ -2.18
CHD8Q9HCK8 AP000705.1-201ENST00000454567 350 ntBASIC1.45□□□□□ -2.18
CHD8Q9HCK8 AC069528.1-202ENST00000482888 637 ntBASIC1.45□□□□□ -2.18
CHD8Q9HCK8 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.45□□□□□ -2.18
CHD8Q9HCK8 AP001005.3-201ENST00000622049 129 ntBASIC1.45□□□□□ -2.18
CHD8Q9HCK8 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC1.44□□□□□ -2.18
CHD8Q9HCK8 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
CHD8Q9HCK8 MTND4P31-201ENST00000425607 1343 ntBASIC1.44□□□□□ -2.18
CHD8Q9HCK8 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.44□□□□□ -2.18
CHD8Q9HCK8 ZNF720P1-201ENST00000562403 1939 ntBASIC1.44□□□□□ -2.18
CHD8Q9HCK8 AC005336.3-201ENST00000623833 2679 ntBASIC1.44□□□□□ -2.18
CHD8Q9HCK8 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC1.44□□□□□ -2.18
CHD8Q9HCK8 AC013470.3-201ENST00000420252 1194 ntBASIC1.44□□□□□ -2.18
CHD8Q9HCK8 AL445669.1-201ENST00000426743 755 ntBASIC1.44□□□□□ -2.18
CHD8Q9HCK8 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC1.44□□□□□ -2.18
CHD8Q9HCK8 AC234775.1-201ENST00000454247 670 ntBASIC1.44□□□□□ -2.18
CHD8Q9HCK8 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC1.44□□□□□ -2.18
CHD8Q9HCK8 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
CHD8Q9HCK8 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC1.44□□□□□ -2.18
CHD8Q9HCK8 AC084364.2-201ENST00000546924 395 ntBASIC1.44□□□□□ -2.18
CHD8Q9HCK8 MIR3670-2-201ENST00000582974 65 ntBASIC1.44□□□□□ -2.18
CHD8Q9HCK8 MIR3670-1-201ENST00000584160 65 ntBASIC1.44□□□□□ -2.18
CHD8Q9HCK8 MIR3670-3-201ENST00000584855 65 ntBASIC1.44□□□□□ -2.18
CHD8Q9HCK8 BNIP3P26-201ENST00000600827 554 ntBASIC1.44□□□□□ -2.18
CHD8Q9HCK8 AL158032.1-201ENST00000605401 106 ntBASIC1.44□□□□□ -2.18
CHD8Q9HCK8 AC013244.3-201ENST00000605614 388 ntBASIC1.44□□□□□ -2.18
CHD8Q9HCK8 MIR3670-4-201ENST00000612260 65 ntBASIC1.44□□□□□ -2.18
CHD8Q9HCK8 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
CHD8Q9HCK8 MRPS36P1-201ENST00000421291 307 ntBASIC1.44□□□□□ -2.18
CHD8Q9HCK8 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC1.44□□□□□ -2.18
CHD8Q9HCK8 BX510359.4-201ENST00000423750 193 ntBASIC1.44□□□□□ -2.18
CHD8Q9HCK8 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC1.44□□□□□ -2.18
CHD8Q9HCK8 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC1.44□□□□□ -2.18
CHD8Q9HCK8 RNA5SP385-201ENST00000515947 110 ntBASIC1.44□□□□□ -2.18
CHD8Q9HCK8 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC1.44□□□□□ -2.18
CHD8Q9HCK8 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC1.44□□□□□ -2.18
CHD8Q9HCK8 BNIP3P4-201ENST00000604946 565 ntBASIC1.44□□□□□ -2.18
CHD8Q9HCK8 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
CHD8Q9HCK8 AC006026.1-201ENST00000444025 1803 ntBASIC1.43□□□□□ -2.18
CHD8Q9HCK8 HSPE1P11-201ENST00000339579 310 ntBASIC1.43□□□□□ -2.18
CHD8Q9HCK8 MIR409-201ENST00000362237 79 ntBASIC1.43□□□□□ -2.18
CHD8Q9HCK8 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
CHD8Q9HCK8 HSPD1P16-201ENST00000402302 394 ntBASIC1.43□□□□□ -2.18
CHD8Q9HCK8 MUPP-201ENST00000438111 566 ntBASIC1.43□□□□□ -2.18
CHD8Q9HCK8 HMGB1P47-201ENST00000511281 589 ntBASIC1.43□□□□□ -2.18
CHD8Q9HCK8 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC1.43□□□□□ -2.18
CHD8Q9HCK8 RNU6-113P-201ENST00000516653 101 ntBASIC1.43□□□□□ -2.18
CHD8Q9HCK8 AL389895.1-201ENST00000554127 252 ntBASIC1.43□□□□□ -2.18
CHD8Q9HCK8 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
CHD8Q9HCK8 MIR3618-201ENST00000580330 88 ntBASIC1.43□□□□□ -2.18
CHD8Q9HCK8 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC1.43□□□□□ -2.18
CHD8Q9HCK8 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
CHD8Q9HCK8 AC010487.4-201ENST00000637027 61 ntBASIC1.43□□□□□ -2.18
CHD8Q9HCK8 UBE2L2-201ENST00000254302 429 ntBASIC1.43□□□□□ -2.18
CHD8Q9HCK8 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
CHD8Q9HCK8 HMGN1P14-201ENST00000412459 517 ntBASIC1.43□□□□□ -2.18
CHD8Q9HCK8 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.43□□□□□ -2.18
CHD8Q9HCK8 TRAPPC2P5-201ENST00000426293 308 ntBASIC1.43□□□□□ -2.18
CHD8Q9HCK8 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC1.43□□□□□ -2.18
CHD8Q9HCK8 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC1.43□□□□□ -2.18
CHD8Q9HCK8 AL157827.1-201ENST00000447622 132 ntBASIC1.43□□□□□ -2.18
CHD8Q9HCK8 AC093752.1-206ENST00000511823 336 ntBASIC1.43□□□□□ -2.18
CHD8Q9HCK8 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
CHD8Q9HCK8 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC1.43□□□□□ -2.18
CHD8Q9HCK8 AC023050.2-201ENST00000544968 387 ntBASIC1.43□□□□□ -2.18
CHD8Q9HCK8 AP000676.4-201ENST00000624659 623 ntBASIC1.43□□□□□ -2.18
CHD8Q9HCK8 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
CHD8Q9HCK8 AL589743.1-201ENST00000551932 2712 ntBASIC1.42□□□□□ -2.18
CHD8Q9HCK8 AC092447.7-201ENST00000422212 1621 ntBASIC1.42□□□□□ -2.18
CHD8Q9HCK8 RNA5SP344-201ENST00000411081 104 ntBASIC1.42□□□□□ -2.18
CHD8Q9HCK8 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.42□□□□□ -2.18
CHD8Q9HCK8 AC000111.3-201ENST00000433478 193 ntBASIC1.42□□□□□ -2.18
CHD8Q9HCK8 EIF2S2P4-201ENST00000461070 984 ntBASIC1.42□□□□□ -2.18
CHD8Q9HCK8 RPL23AP44-201ENST00000482216 473 ntBASIC1.42□□□□□ -2.18
CHD8Q9HCK8 APOOP3-201ENST00000536787 586 ntBASIC1.42□□□□□ -2.18
CHD8Q9HCK8 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
CHD8Q9HCK8 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.42□□□□□ -2.18
CHD8Q9HCK8 AC023813.2-201ENST00000564321 469 ntBASIC1.42□□□□□ -2.18
CHD8Q9HCK8 AC013553.2-201ENST00000604244 589 ntBASIC1.42□□□□□ -2.18
CHD8Q9HCK8 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 132.9 ms