Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 RNY4P16-201ENST00000364768 94 ntBASIC3.99□□□□□ -1.77
USP29Q9HBJ7 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.99□□□□□ -1.77
USP29Q9HBJ7 Y_RNA.390-201ENST00000383932 102 ntBASIC3.99□□□□□ -1.77
USP29Q9HBJ7 RNU6-821P-201ENST00000390995 107 ntBASIC3.99□□□□□ -1.77
USP29Q9HBJ7 HMGN2P8-201ENST00000391458 268 ntBASIC3.99□□□□□ -1.77
USP29Q9HBJ7 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.99□□□□□ -1.77
USP29Q9HBJ7 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.99□□□□□ -1.77
USP29Q9HBJ7 AC233728.2-201ENST00000425348 757 ntBASIC3.99□□□□□ -1.77
USP29Q9HBJ7 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.99□□□□□ -1.77
USP29Q9HBJ7 AC006946.1-201ENST00000429106 328 ntBASIC3.99□□□□□ -1.77
USP29Q9HBJ7 RPS6P12-201ENST00000432491 726 ntBASIC3.99□□□□□ -1.77
USP29Q9HBJ7 UBE2V1P13-201ENST00000436983 439 ntBASIC3.99□□□□□ -1.77
USP29Q9HBJ7 FTH1P1-201ENST00000437933 532 ntBASIC3.99□□□□□ -1.77
USP29Q9HBJ7 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.99□□□□□ -1.77
USP29Q9HBJ7 USP9YP15-201ENST00000442391 422 ntBASIC3.99□□□□□ -1.77
USP29Q9HBJ7 AL353572.1-201ENST00000442490 417 ntBASIC3.99□□□□□ -1.77
USP29Q9HBJ7 MTATP6P30-201ENST00000443540 664 ntBASIC3.99□□□□□ -1.77
USP29Q9HBJ7 AL645939.1-201ENST00000453429 797 ntBASIC3.99□□□□□ -1.77
USP29Q9HBJ7 MTND1P12-201ENST00000455231 147 ntBASIC3.99□□□□□ -1.77
USP29Q9HBJ7 AL139099.1-201ENST00000497398 403 ntBASIC3.99□□□□□ -1.77
USP29Q9HBJ7 AC020893.1-201ENST00000502452 580 ntBASIC3.99□□□□□ -1.77
USP29Q9HBJ7 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.99□□□□□ -1.77
USP29Q9HBJ7 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.99□□□□□ -1.77
USP29Q9HBJ7 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.99□□□□□ -1.77
USP29Q9HBJ7 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.99□□□□□ -1.77
USP29Q9HBJ7 HMGB1P33-201ENST00000563485 527 ntBASIC3.99□□□□□ -1.77
USP29Q9HBJ7 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.99□□□□□ -1.77
USP29Q9HBJ7 MIR3944-201ENST00000581277 108 ntBASIC3.99□□□□□ -1.77
USP29Q9HBJ7 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.99□□□□□ -1.77
USP29Q9HBJ7 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.99□□□□□ -1.77
USP29Q9HBJ7 AL592436.1-201ENST00000605135 558 ntBASIC3.99□□□□□ -1.77
USP29Q9HBJ7 MIR98-201ENST00000606724 119 ntBASIC3.99□□□□□ -1.77
USP29Q9HBJ7 AL161734.1-201ENST00000609720 557 ntBASIC3.99□□□□□ -1.77
USP29Q9HBJ7 AL590282.1-201ENST00000610379 1136 ntBASIC3.99□□□□□ -1.77
USP29Q9HBJ7 AC004825.2-201ENST00000616634 455 ntBASIC3.99□□□□□ -1.77
USP29Q9HBJ7 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
USP29Q9HBJ7 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.99□□□□□ -1.77
USP29Q9HBJ7 U7.8-201ENST00000619968 63 ntBASIC3.99□□□□□ -1.77
USP29Q9HBJ7 LRRC77P-213ENST00000637727 880 ntBASIC3.99□□□□□ -1.77
USP29Q9HBJ7 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
USP29Q9HBJ7 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
USP29Q9HBJ7 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.99□□□□□ -1.77
USP29Q9HBJ7 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.99□□□□□ -1.77
USP29Q9HBJ7 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.99□□□□□ -1.77
USP29Q9HBJ7 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.98□□□□□ -1.77
USP29Q9HBJ7 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.98□□□□□ -1.77
USP29Q9HBJ7 AL138713.1-201ENST00000624026 2130 ntBASIC3.98□□□□□ -1.77
USP29Q9HBJ7 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.98□□□□□ -1.77
USP29Q9HBJ7 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.98□□□□□ -1.77
USP29Q9HBJ7 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.98□□□□□ -1.77
USP29Q9HBJ7 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.98□□□□□ -1.77
USP29Q9HBJ7 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
USP29Q9HBJ7 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
USP29Q9HBJ7 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
USP29Q9HBJ7 RNU1-18P-201ENST00000363062 164 ntBASIC3.98□□□□□ -1.77
USP29Q9HBJ7 RNU6-169P-201ENST00000365336 107 ntBASIC3.98□□□□□ -1.77
USP29Q9HBJ7 MIR19A-201ENST00000384878 82 ntBASIC3.98□□□□□ -1.77
USP29Q9HBJ7 MIR199A2-201ENST00000385289 110 ntBASIC3.98□□□□□ -1.77
USP29Q9HBJ7 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
USP29Q9HBJ7 MIR1277-201ENST00000408536 78 ntBASIC3.98□□□□□ -1.77
USP29Q9HBJ7 RNU4-6P-201ENST00000410804 122 ntBASIC3.98□□□□□ -1.77
USP29Q9HBJ7 HMGB3P20-201ENST00000417997 600 ntBASIC3.98□□□□□ -1.77
USP29Q9HBJ7 FCF1P1-201ENST00000432690 571 ntBASIC3.98□□□□□ -1.77
USP29Q9HBJ7 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
USP29Q9HBJ7 AC002486.1-201ENST00000435098 391 ntBASIC3.98□□□□□ -1.77
USP29Q9HBJ7 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.98□□□□□ -1.77
USP29Q9HBJ7 AL136380.1-201ENST00000447970 162 ntBASIC3.98□□□□□ -1.77
USP29Q9HBJ7 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.98□□□□□ -1.77
USP29Q9HBJ7 MTND2P24-201ENST00000453434 806 ntBASIC3.98□□□□□ -1.77
USP29Q9HBJ7 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.98□□□□□ -1.77
USP29Q9HBJ7 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.98□□□□□ -1.77
USP29Q9HBJ7 snoU13.3-201ENST00000459441 104 ntBASIC3.98□□□□□ -1.77
USP29Q9HBJ7 AC007182.2-201ENST00000489251 402 ntBASIC3.98□□□□□ -1.77
USP29Q9HBJ7 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.98□□□□□ -1.77
USP29Q9HBJ7 AC010493.1-201ENST00000513479 292 ntBASIC3.98□□□□□ -1.77
USP29Q9HBJ7 AP003072.2-201ENST00000527756 676 ntBASIC3.98□□□□□ -1.77
USP29Q9HBJ7 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.98□□□□□ -1.77
USP29Q9HBJ7 AP003385.6-201ENST00000531603 374 ntBASIC3.98□□□□□ -1.77
USP29Q9HBJ7 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.98□□□□□ -1.77
USP29Q9HBJ7 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.98□□□□□ -1.77
USP29Q9HBJ7 AP005205.1-201ENST00000563503 508 ntBASIC3.98□□□□□ -1.77
USP29Q9HBJ7 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.98□□□□□ -1.77
USP29Q9HBJ7 AC068790.3-201ENST00000602988 553 ntBASIC3.98□□□□□ -1.77
USP29Q9HBJ7 IGHV3-29-201ENST00000604817 344 ntBASIC3.98□□□□□ -1.77
USP29Q9HBJ7 AL034351.1-201ENST00000605288 668 ntBASIC3.98□□□□□ -1.77
USP29Q9HBJ7 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.98□□□□□ -1.77
USP29Q9HBJ7 AL354798.1-201ENST00000622505 329 ntBASIC3.98□□□□□ -1.77
USP29Q9HBJ7 AL159972.1-201ENST00000625150 448 ntBASIC3.98□□□□□ -1.77
USP29Q9HBJ7 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.98□□□□□ -1.77
USP29Q9HBJ7 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
USP29Q9HBJ7 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.98□□□□□ -1.77
USP29Q9HBJ7 TNPO1P3-201ENST00000436471 2662 ntBASIC3.98□□□□□ -1.77
USP29Q9HBJ7 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.98□□□□□ -1.77
USP29Q9HBJ7 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
USP29Q9HBJ7 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
USP29Q9HBJ7 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.98□□□□□ -1.77
USP29Q9HBJ7 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
USP29Q9HBJ7 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
USP29Q9HBJ7 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.98□□□□□ -1.77
USP29Q9HBJ7 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms