Protein–RNA interactions for Protein: Q9H0E7

USP44, Ubiquitin carboxyl-terminal hydrolase 44, humanhuman

Predictions only

Length 712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP44Q9H0E7 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.89□□□□□ -1.79
USP44Q9H0E7 AL122001.1-201ENST00000457027 370 ntBASIC3.89□□□□□ -1.79
USP44Q9H0E7 AC010468.1-201ENST00000461022 817 ntBASIC3.89□□□□□ -1.79
USP44Q9H0E7 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.89□□□□□ -1.79
USP44Q9H0E7 S100A11P2-201ENST00000467589 312 ntBASIC3.89□□□□□ -1.79
USP44Q9H0E7 VN1R17P-201ENST00000472048 1090 ntBASIC3.89□□□□□ -1.79
USP44Q9H0E7 RPS4XP22-201ENST00000480755 780 ntBASIC3.89□□□□□ -1.79
USP44Q9H0E7 DSTNP2-201ENST00000504533 515 ntBASIC3.89□□□□□ -1.79
USP44Q9H0E7 KLHL2P1-201ENST00000508691 521 ntBASIC3.89□□□□□ -1.79
USP44Q9H0E7 AC117522.2-201ENST00000510049 657 ntBASIC3.89□□□□□ -1.79
USP44Q9H0E7 SNORA74D-201ENST00000516404 141 ntBASIC3.89□□□□□ -1.79
USP44Q9H0E7 RNU6-528P-201ENST00000516926 100 ntBASIC3.89□□□□□ -1.79
USP44Q9H0E7 PSMA2P1-201ENST00000526365 646 ntBASIC3.89□□□□□ -1.79
USP44Q9H0E7 AL356057.1-201ENST00000533798 831 ntBASIC3.89□□□□□ -1.79
USP44Q9H0E7 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.89□□□□□ -1.79
USP44Q9H0E7 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.89□□□□□ -1.79
USP44Q9H0E7 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.89□□□□□ -1.79
USP44Q9H0E7 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.89□□□□□ -1.79
USP44Q9H0E7 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.89□□□□□ -1.79
USP44Q9H0E7 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.89□□□□□ -1.79
USP44Q9H0E7 MIR3690-201ENST00000580266 75 ntBASIC3.89□□□□□ -1.79
USP44Q9H0E7 MIR544B-201ENST00000582372 78 ntBASIC3.89□□□□□ -1.79
USP44Q9H0E7 AC110760.3-201ENST00000598794 467 ntBASIC3.89□□□□□ -1.79
USP44Q9H0E7 AC090425.2-201ENST00000608818 501 ntBASIC3.89□□□□□ -1.79
USP44Q9H0E7 AC099506.2-201ENST00000623074 221 ntBASIC3.89□□□□□ -1.79
USP44Q9H0E7 AF246928.1-201ENST00000623768 87 ntBASIC3.89□□□□□ -1.79
USP44Q9H0E7 AC048347.1-201ENST00000624621 427 ntBASIC3.89□□□□□ -1.79
USP44Q9H0E7 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
USP44Q9H0E7 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
USP44Q9H0E7 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
USP44Q9H0E7 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.89□□□□□ -1.79
USP44Q9H0E7 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.88□□□□□ -1.79
USP44Q9H0E7 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.88□□□□□ -1.79
USP44Q9H0E7 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
USP44Q9H0E7 AC009902.3-201ENST00000606235 2172 ntBASIC3.88□□□□□ -1.79
USP44Q9H0E7 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
USP44Q9H0E7 SNORD56.3-201ENST00000363507 71 ntBASIC3.88□□□□□ -1.79
USP44Q9H0E7 Y_RNA.560-201ENST00000384689 102 ntBASIC3.88□□□□□ -1.79
USP44Q9H0E7 AC110754.1-201ENST00000399740 601 ntBASIC3.88□□□□□ -1.79
USP44Q9H0E7 HSPE1P26-201ENST00000405341 275 ntBASIC3.88□□□□□ -1.79
USP44Q9H0E7 MIR1302-8-201ENST00000408342 128 ntBASIC3.88□□□□□ -1.79
USP44Q9H0E7 RNU6-920P-201ENST00000410926 92 ntBASIC3.88□□□□□ -1.79
USP44Q9H0E7 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.88□□□□□ -1.79
USP44Q9H0E7 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.88□□□□□ -1.79
USP44Q9H0E7 AC109583.1-201ENST00000432156 268 ntBASIC3.88□□□□□ -1.79
USP44Q9H0E7 RPL37P21-201ENST00000435890 276 ntBASIC3.88□□□□□ -1.79
USP44Q9H0E7 HMGB1P12-201ENST00000438594 598 ntBASIC3.88□□□□□ -1.79
USP44Q9H0E7 MTND1P30-201ENST00000441241 901 ntBASIC3.88□□□□□ -1.79
USP44Q9H0E7 RPS27AP8-201ENST00000452665 445 ntBASIC3.88□□□□□ -1.79
USP44Q9H0E7 OR6K1P-201ENST00000456766 971 ntBASIC3.88□□□□□ -1.79
USP44Q9H0E7 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.88□□□□□ -1.79
USP44Q9H0E7 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.88□□□□□ -1.79
USP44Q9H0E7 SNORA64.4-201ENST00000516632 81 ntBASIC3.88□□□□□ -1.79
USP44Q9H0E7 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.88□□□□□ -1.79
USP44Q9H0E7 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.88□□□□□ -1.79
USP44Q9H0E7 MIR3915-201ENST00000578518 97 ntBASIC3.88□□□□□ -1.79
USP44Q9H0E7 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.88□□□□□ -1.79
USP44Q9H0E7 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.88□□□□□ -1.79
USP44Q9H0E7 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.88□□□□□ -1.79
USP44Q9H0E7 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.88□□□□□ -1.79
USP44Q9H0E7 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.88□□□□□ -1.79
USP44Q9H0E7 AC107214.2-201ENST00000608204 634 ntBASIC3.88□□□□□ -1.79
USP44Q9H0E7 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.88□□□□□ -1.79
USP44Q9H0E7 AC012360.2-201ENST00000609349 391 ntBASIC3.88□□□□□ -1.79
USP44Q9H0E7 AC008121.2-201ENST00000614647 523 ntBASIC3.88□□□□□ -1.79
USP44Q9H0E7 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.88□□□□□ -1.79
USP44Q9H0E7 AC091953.5-201ENST00000622919 233 ntBASIC3.88□□□□□ -1.79
USP44Q9H0E7 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.88□□□□□ -1.79
USP44Q9H0E7 AC007494.3-201ENST00000624660 743 ntBASIC3.88□□□□□ -1.79
USP44Q9H0E7 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.88□□□□□ -1.79
USP44Q9H0E7 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.88□□□□□ -1.79
USP44Q9H0E7 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
USP44Q9H0E7 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.88□□□□□ -1.79
USP44Q9H0E7 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
USP44Q9H0E7 ZNF833P-201ENST00000424938 1494 ntBASIC3.87□□□□□ -1.79
USP44Q9H0E7 AC011460.1-201ENST00000636268 1834 ntBASIC3.87□□□□□ -1.79
USP44Q9H0E7 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
USP44Q9H0E7 AC073325.2-201ENST00000339545 159 ntBASIC3.87□□□□□ -1.79
USP44Q9H0E7 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.87□□□□□ -1.79
USP44Q9H0E7 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.87□□□□□ -1.79
USP44Q9H0E7 MTCO1P39-201ENST00000426148 480 ntBASIC3.87□□□□□ -1.79
USP44Q9H0E7 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.87□□□□□ -1.79
USP44Q9H0E7 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.87□□□□□ -1.79
USP44Q9H0E7 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.87□□□□□ -1.79
USP44Q9H0E7 AL117351.1-201ENST00000438864 766 ntBASIC3.87□□□□□ -1.79
USP44Q9H0E7 CYCSP32-201ENST00000440548 321 ntBASIC3.87□□□□□ -1.79
USP44Q9H0E7 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.87□□□□□ -1.79
USP44Q9H0E7 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.87□□□□□ -1.79
USP44Q9H0E7 AC104308.1-201ENST00000454621 333 ntBASIC3.87□□□□□ -1.79
USP44Q9H0E7 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.87□□□□□ -1.79
USP44Q9H0E7 RPL9P32-201ENST00000464118 620 ntBASIC3.87□□□□□ -1.79
USP44Q9H0E7 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.87□□□□□ -1.79
USP44Q9H0E7 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.87□□□□□ -1.79
USP44Q9H0E7 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.87□□□□□ -1.79
USP44Q9H0E7 AC004062.1-201ENST00000509926 645 ntBASIC3.87□□□□□ -1.79
USP44Q9H0E7 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.87□□□□□ -1.79
USP44Q9H0E7 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.87□□□□□ -1.79
USP44Q9H0E7 AC017037.2-201ENST00000513850 890 ntBASIC3.87□□□□□ -1.79
USP44Q9H0E7 MTCO2P32-201ENST00000514865 403 ntBASIC3.87□□□□□ -1.79
USP44Q9H0E7 RNA5SP468-201ENST00000516782 93 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms