Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 HSFY6P-201ENST00000445573 403 ntBASIC5.48□□□□□ -1.53
TRAIPQ9BWF2 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.48□□□□□ -1.53
TRAIPQ9BWF2 RN7SL346P-201ENST00000491561 294 ntBASIC5.48□□□□□ -1.53
TRAIPQ9BWF2 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC5.48□□□□□ -1.53
TRAIPQ9BWF2 FGF7P4-201ENST00000509595 295 ntBASIC5.48□□□□□ -1.53
TRAIPQ9BWF2 AC008716.1-201ENST00000511084 513 ntBASIC5.48□□□□□ -1.53
TRAIPQ9BWF2 RPL39P5-202ENST00000512505 151 ntBASIC5.48□□□□□ -1.53
TRAIPQ9BWF2 RNU6-273P-201ENST00000516937 96 ntBASIC5.48□□□□□ -1.53
TRAIPQ9BWF2 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.48□□□□□ -1.53
TRAIPQ9BWF2 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.48□□□□□ -1.53
TRAIPQ9BWF2 AC090115.3-201ENST00000553218 849 ntBASIC5.48□□□□□ -1.53
TRAIPQ9BWF2 AC112487.2-201ENST00000637950 304 ntBASIC5.48□□□□□ -1.53
TRAIPQ9BWF2 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC5.48□□□□□ -1.53
TRAIPQ9BWF2 MFSD8-216ENST00000641147 4009 ntBASIC5.48□□□□□ -1.53
TRAIPQ9BWF2 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
TRAIPQ9BWF2 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
TRAIPQ9BWF2 AL450345.1-202ENST00000605741 3881 ntBASIC5.48□□□□□ -1.53
TRAIPQ9BWF2 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
TRAIPQ9BWF2 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
TRAIPQ9BWF2 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.47□□□□□ -1.53
TRAIPQ9BWF2 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.47□□□□□ -1.53
TRAIPQ9BWF2 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TRAIPQ9BWF2 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
TRAIPQ9BWF2 RNU6-1252P-201ENST00000363054 104 ntBASIC5.47□□□□□ -1.53
TRAIPQ9BWF2 RNU6-371P-201ENST00000364283 108 ntBASIC5.47□□□□□ -1.53
TRAIPQ9BWF2 SNORA56-201ENST00000383966 129 ntBASIC5.47□□□□□ -1.53
TRAIPQ9BWF2 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TRAIPQ9BWF2 RNU6-1025P-201ENST00000410629 104 ntBASIC5.47□□□□□ -1.53
TRAIPQ9BWF2 AL139396.1-201ENST00000421137 167 ntBASIC5.47□□□□□ -1.53
TRAIPQ9BWF2 RPL21P109-201ENST00000422213 475 ntBASIC5.47□□□□□ -1.53
TRAIPQ9BWF2 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC5.47□□□□□ -1.53
TRAIPQ9BWF2 COX6CP13-201ENST00000428703 226 ntBASIC5.47□□□□□ -1.53
TRAIPQ9BWF2 AC092573.2-201ENST00000434546 243 ntBASIC5.47□□□□□ -1.53
TRAIPQ9BWF2 AL451139.1-201ENST00000434718 346 ntBASIC5.47□□□□□ -1.53
TRAIPQ9BWF2 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC5.47□□□□□ -1.53
TRAIPQ9BWF2 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TRAIPQ9BWF2 AC026979.1-201ENST00000492525 396 ntBASIC5.47□□□□□ -1.53
TRAIPQ9BWF2 MTCO1P29-201ENST00000496868 288 ntBASIC5.47□□□□□ -1.53
TRAIPQ9BWF2 ENSA-210ENST00000503241 574 ntTSL 3 BASIC5.47□□□□□ -1.53
TRAIPQ9BWF2 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC5.47□□□□□ -1.53
TRAIPQ9BWF2 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC5.47□□□□□ -1.53
TRAIPQ9BWF2 SNORA14.1-201ENST00000516113 141 ntBASIC5.47□□□□□ -1.53
TRAIPQ9BWF2 RNU6-864P-201ENST00000516256 108 ntBASIC5.47□□□□□ -1.53
TRAIPQ9BWF2 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.47□□□□□ -1.53
TRAIPQ9BWF2 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.47□□□□□ -1.53
TRAIPQ9BWF2 SCOCP1-201ENST00000554676 349 ntBASIC5.47□□□□□ -1.53
TRAIPQ9BWF2 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC5.47□□□□□ -1.53
TRAIPQ9BWF2 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.47□□□□□ -1.53
TRAIPQ9BWF2 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.47□□□□□ -1.53
TRAIPQ9BWF2 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.47□□□□□ -1.53
TRAIPQ9BWF2 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.47□□□□□ -1.53
TRAIPQ9BWF2 AL391358.1-201ENST00000605342 190 ntBASIC5.47□□□□□ -1.53
TRAIPQ9BWF2 DUSP12P1-201ENST00000612874 516 ntBASIC5.47□□□□□ -1.53
TRAIPQ9BWF2 uc_338.15-201ENST00000615470 191 ntBASIC5.47□□□□□ -1.53
TRAIPQ9BWF2 CR381572.2-201ENST00000624852 397 ntBASIC5.47□□□□□ -1.53
TRAIPQ9BWF2 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC5.47□□□□□ -1.53
TRAIPQ9BWF2 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.47□□□□□ -1.53
TRAIPQ9BWF2 AC090740.1-201ENST00000623193 2262 ntBASIC5.47□□□□□ -1.53
TRAIPQ9BWF2 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TRAIPQ9BWF2 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TRAIPQ9BWF2 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TRAIPQ9BWF2 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TRAIPQ9BWF2 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
TRAIPQ9BWF2 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
TRAIPQ9BWF2 OR56B2P-202ENST00000641377 2453 ntBASIC5.47□□□□□ -1.53
TRAIPQ9BWF2 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TRAIPQ9BWF2 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC5.46□□□□□ -1.53
TRAIPQ9BWF2 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.53
TRAIPQ9BWF2 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.53
TRAIPQ9BWF2 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TRAIPQ9BWF2 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC5.46□□□□□ -1.54
TRAIPQ9BWF2 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
TRAIPQ9BWF2 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TRAIPQ9BWF2 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TRAIPQ9BWF2 AC007685.1-201ENST00000329806 452 ntBASIC5.46□□□□□ -1.54
TRAIPQ9BWF2 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
TRAIPQ9BWF2 Y_RNA.384-201ENST00000383909 102 ntBASIC5.46□□□□□ -1.54
TRAIPQ9BWF2 MIR450B-201ENST00000401182 78 ntBASIC5.46□□□□□ -1.54
TRAIPQ9BWF2 RNA5SP113-201ENST00000410486 84 ntBASIC5.46□□□□□ -1.54
TRAIPQ9BWF2 RNU2-68P-201ENST00000410878 191 ntBASIC5.46□□□□□ -1.54
TRAIPQ9BWF2 RN7SKP53-201ENST00000411337 315 ntBASIC5.46□□□□□ -1.54
TRAIPQ9BWF2 AC245028.1-201ENST00000423259 256 ntBASIC5.46□□□□□ -1.54
TRAIPQ9BWF2 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC5.46□□□□□ -1.54
TRAIPQ9BWF2 TOMM20P4-201ENST00000427861 435 ntBASIC5.46□□□□□ -1.54
TRAIPQ9BWF2 AL512844.2-201ENST00000433990 593 ntBASIC5.46□□□□□ -1.54
TRAIPQ9BWF2 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC5.46□□□□□ -1.54
TRAIPQ9BWF2 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.46□□□□□ -1.54
TRAIPQ9BWF2 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC5.46□□□□□ -1.54
TRAIPQ9BWF2 RPL23AP89-201ENST00000439324 255 ntBASIC5.46□□□□□ -1.54
TRAIPQ9BWF2 HMGB3P11-201ENST00000440127 604 ntBASIC5.46□□□□□ -1.54
TRAIPQ9BWF2 AC012512.1-201ENST00000446594 718 ntBASIC5.46□□□□□ -1.54
TRAIPQ9BWF2 FABP5P15-201ENST00000453566 214 ntBASIC5.46□□□□□ -1.54
TRAIPQ9BWF2 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC5.46□□□□□ -1.54
TRAIPQ9BWF2 AC091180.1-201ENST00000462104 372 ntBASIC5.46□□□□□ -1.54
TRAIPQ9BWF2 AC084357.1-201ENST00000473404 255 ntBASIC5.46□□□□□ -1.54
TRAIPQ9BWF2 RNU6-1282P-201ENST00000516735 96 ntBASIC5.46□□□□□ -1.54
TRAIPQ9BWF2 AP000889.2-201ENST00000532684 490 ntBASIC5.46□□□□□ -1.54
TRAIPQ9BWF2 MTCO3P23-201ENST00000561363 289 ntBASIC5.46□□□□□ -1.54
TRAIPQ9BWF2 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC5.46□□□□□ -1.54
TRAIPQ9BWF2 MIR3936-201ENST00000584304 110 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms