Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SSX3Q99909 RNU6-432P-201ENST00000384196 109 ntBASIC2.99□□□□□ -1.93
SSX3Q99909 MIR1289-1-201ENST00000408836 144 ntBASIC2.99□□□□□ -1.93
SSX3Q99909 RN7SKP123-201ENST00000410732 291 ntBASIC2.99□□□□□ -1.93
SSX3Q99909 RNA5SP31-201ENST00000411144 127 ntBASIC2.99□□□□□ -1.93
SSX3Q99909 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.99□□□□□ -1.93
SSX3Q99909 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.99□□□□□ -1.93
SSX3Q99909 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC2.99□□□□□ -1.93
SSX3Q99909 RPL35AP22-201ENST00000436855 335 ntBASIC2.99□□□□□ -1.93
SSX3Q99909 RPL23AP22-201ENST00000437556 453 ntBASIC2.99□□□□□ -1.93
SSX3Q99909 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.99□□□□□ -1.93
SSX3Q99909 AC009237.8-201ENST00000445492 379 ntBASIC2.99□□□□□ -1.93
SSX3Q99909 SUN3-208ENST00000453192 801 ntTSL 5 BASIC2.99□□□□□ -1.93
SSX3Q99909 MTND2P24-201ENST00000453434 806 ntBASIC2.99□□□□□ -1.93
SSX3Q99909 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.99□□□□□ -1.93
SSX3Q99909 AP1S2P1-201ENST00000457344 379 ntBASIC2.99□□□□□ -1.93
SSX3Q99909 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC2.99□□□□□ -1.93
SSX3Q99909 AC093663.1-201ENST00000497190 394 ntBASIC2.99□□□□□ -1.93
SSX3Q99909 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SSX3Q99909 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.99□□□□□ -1.93
SSX3Q99909 AC104619.4-201ENST00000510773 249 ntBASIC2.99□□□□□ -1.93
SSX3Q99909 TTC39CP1-201ENST00000512513 755 ntBASIC2.99□□□□□ -1.93
SSX3Q99909 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.99□□□□□ -1.93
SSX3Q99909 RNA5SP208-201ENST00000516156 78 ntBASIC2.99□□□□□ -1.93
SSX3Q99909 AC026403.1-201ENST00000518938 295 ntBASIC2.99□□□□□ -1.93
SSX3Q99909 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.99□□□□□ -1.93
SSX3Q99909 AC007954.1-201ENST00000554198 494 ntBASIC2.99□□□□□ -1.93
SSX3Q99909 MEG8-215ENST00000555354 469 ntTSL 3 BASIC2.99□□□□□ -1.93
SSX3Q99909 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.99□□□□□ -1.93
SSX3Q99909 ACTR3BP3-201ENST00000565577 979 ntBASIC2.99□□□□□ -1.93
SSX3Q99909 AP001004.1-201ENST00000582468 324 ntBASIC2.99□□□□□ -1.93
SSX3Q99909 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC2.99□□□□□ -1.93
SSX3Q99909 U73023.1-201ENST00000603134 700 ntBASIC2.99□□□□□ -1.93
SSX3Q99909 AC013553.2-201ENST00000604244 589 ntBASIC2.99□□□□□ -1.93
SSX3Q99909 BCRP9-201ENST00000605312 388 ntBASIC2.99□□□□□ -1.93
SSX3Q99909 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC2.99□□□□□ -1.93
SSX3Q99909 AC019226.1-201ENST00000625666 515 ntBASIC2.99□□□□□ -1.93
SSX3Q99909 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
SSX3Q99909 OR5H6-203ENST00000642105 978 ntBASIC2.99□□□□□ -1.93
SSX3Q99909 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
SSX3Q99909 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SSX3Q99909 DDX10P1-201ENST00000448545 1933 ntBASIC2.99□□□□□ -1.93
SSX3Q99909 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SSX3Q99909 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SSX3Q99909 AC092125.1-201ENST00000562568 1995 ntBASIC2.98□□□□□ -1.93
SSX3Q99909 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
SSX3Q99909 RNA5SP51-201ENST00000364750 119 ntBASIC2.98□□□□□ -1.93
SSX3Q99909 RNU6-198P-201ENST00000384258 104 ntBASIC2.98□□□□□ -1.93
SSX3Q99909 RNU6-754P-201ENST00000391166 107 ntBASIC2.98□□□□□ -1.93
SSX3Q99909 RPL7P60-201ENST00000397636 735 ntBASIC2.98□□□□□ -1.93
SSX3Q99909 AL031121.1-201ENST00000406553 254 ntBASIC2.98□□□□□ -1.93
SSX3Q99909 RPL5P18-201ENST00000406671 891 ntBASIC2.98□□□□□ -1.93
SSX3Q99909 AL645937.1-202ENST00000421799 937 ntBASIC2.98□□□□□ -1.93
SSX3Q99909 AC018630.2-202ENST00000422992 927 ntBASIC2.98□□□□□ -1.93
SSX3Q99909 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC2.98□□□□□ -1.93
SSX3Q99909 AC091286.1-201ENST00000431233 461 ntBASIC2.98□□□□□ -1.93
SSX3Q99909 HSPD1P21-201ENST00000436541 245 ntBASIC2.98□□□□□ -1.93
SSX3Q99909 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
SSX3Q99909 RPL7P36-201ENST00000444633 681 ntBASIC2.98□□□□□ -1.93
SSX3Q99909 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.98□□□□□ -1.93
SSX3Q99909 AL358232.1-201ENST00000448030 501 ntBASIC2.98□□□□□ -1.93
SSX3Q99909 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC2.98□□□□□ -1.93
SSX3Q99909 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.98□□□□□ -1.93
SSX3Q99909 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC2.98□□□□□ -1.93
SSX3Q99909 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.98□□□□□ -1.93
SSX3Q99909 AL139824.2-201ENST00000458731 1095 ntBASIC2.98□□□□□ -1.93
SSX3Q99909 SNORA31.26-201ENST00000517250 137 ntBASIC2.98□□□□□ -1.93
SSX3Q99909 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC2.98□□□□□ -1.93
SSX3Q99909 AC007991.1-201ENST00000522680 631 ntBASIC2.98□□□□□ -1.93
SSX3Q99909 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
SSX3Q99909 GTF2IP22-201ENST00000554443 182 ntBASIC2.98□□□□□ -1.93
SSX3Q99909 KLKP1-201ENST00000595979 403 ntBASIC2.98□□□□□ -1.93
SSX3Q99909 AC112187.2-201ENST00000604345 283 ntBASIC2.98□□□□□ -1.93
SSX3Q99909 RNU1-30P-201ENST00000606575 163 ntBASIC2.98□□□□□ -1.93
SSX3Q99909 AL161629.2-201ENST00000615347 275 ntBASIC2.98□□□□□ -1.93
SSX3Q99909 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
SSX3Q99909 AL603758.1-201ENST00000618654 241 ntBASIC2.98□□□□□ -1.93
SSX3Q99909 AC079684.1-201ENST00000621405 437 ntBASIC2.98□□□□□ -1.93
SSX3Q99909 AC110801.1-201ENST00000623590 212 ntBASIC2.98□□□□□ -1.93
SSX3Q99909 TEX41-300ENST00000631048 69 ntTSL 5 BASIC2.98□□□□□ -1.93
SSX3Q99909 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
SSX3Q99909 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
SSX3Q99909 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.98□□□□□ -1.93
SSX3Q99909 AC006378.2-201ENST00000623178 2476 ntBASIC2.98□□□□□ -1.93
SSX3Q99909 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SSX3Q99909 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.97□□□□□ -1.93
SSX3Q99909 MTND5P33-201ENST00000571250 1450 ntBASIC2.97□□□□□ -1.93
SSX3Q99909 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SSX3Q99909 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SSX3Q99909 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SSX3Q99909 RNA5SP139-201ENST00000364340 117 ntBASIC2.97□□□□□ -1.93
SSX3Q99909 MIR7-3-201ENST00000384898 110 ntBASIC2.97□□□□□ -1.93
SSX3Q99909 MIR514A1-201ENST00000385133 98 ntBASIC2.97□□□□□ -1.93
SSX3Q99909 AC126124.2-201ENST00000413542 321 ntBASIC2.97□□□□□ -1.93
SSX3Q99909 RPS29P4-201ENST00000414733 161 ntBASIC2.97□□□□□ -1.93
SSX3Q99909 ATG3P1-201ENST00000419507 911 ntBASIC2.97□□□□□ -1.93
SSX3Q99909 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.97□□□□□ -1.93
SSX3Q99909 MTND4P20-201ENST00000424125 869 ntBASIC2.97□□□□□ -1.93
SSX3Q99909 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC2.97□□□□□ -1.93
SSX3Q99909 AL451062.2-201ENST00000427515 271 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms