Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.6□□□□□ -1.83
PKP4Q99569 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PKP4Q99569 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
PKP4Q99569 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.6□□□□□ -1.83
PKP4Q99569 AL356321.1-201ENST00000621360 228 ntBASIC3.6□□□□□ -1.83
PKP4Q99569 AC034229.5-201ENST00000624258 185 ntBASIC3.6□□□□□ -1.83
PKP4Q99569 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.6□□□□□ -1.83
PKP4Q99569 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PKP4Q99569 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.59□□□□□ -1.83
PKP4Q99569 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
PKP4Q99569 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PKP4Q99569 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.59□□□□□ -1.83
PKP4Q99569 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
PKP4Q99569 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
PKP4Q99569 RNU6-777P-201ENST00000364265 104 ntBASIC3.59□□□□□ -1.83
PKP4Q99569 RNU5E-4P-201ENST00000364931 120 ntBASIC3.59□□□□□ -1.83
PKP4Q99569 RNU6-533P-201ENST00000384144 107 ntBASIC3.59□□□□□ -1.83
PKP4Q99569 Y_RNA.554-201ENST00000384672 102 ntBASIC3.59□□□□□ -1.83
PKP4Q99569 MIR591-201ENST00000385290 95 ntBASIC3.59□□□□□ -1.83
PKP4Q99569 RPS3AP3-201ENST00000411933 242 ntBASIC3.59□□□□□ -1.83
PKP4Q99569 HMGB3P20-201ENST00000417997 600 ntBASIC3.59□□□□□ -1.83
PKP4Q99569 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.59□□□□□ -1.83
PKP4Q99569 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.59□□□□□ -1.83
PKP4Q99569 AC073614.1-201ENST00000438690 650 ntBASIC3.59□□□□□ -1.83
PKP4Q99569 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.59□□□□□ -1.83
PKP4Q99569 OR6K1P-201ENST00000456766 971 ntBASIC3.59□□□□□ -1.83
PKP4Q99569 RPL31P58-201ENST00000469001 379 ntBASIC3.59□□□□□ -1.83
PKP4Q99569 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PKP4Q99569 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.59□□□□□ -1.83
PKP4Q99569 AC022447.3-201ENST00000506865 495 ntBASIC3.59□□□□□ -1.83
PKP4Q99569 PRDX4P1-201ENST00000507189 574 ntBASIC3.59□□□□□ -1.83
PKP4Q99569 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.59□□□□□ -1.83
PKP4Q99569 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.59□□□□□ -1.83
PKP4Q99569 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.59□□□□□ -1.83
PKP4Q99569 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PKP4Q99569 RN7SKP13-201ENST00000515933 244 ntBASIC3.59□□□□□ -1.83
PKP4Q99569 RN7SKP83-201ENST00000516512 178 ntBASIC3.59□□□□□ -1.83
PKP4Q99569 SNORA18.6-201ENST00000516792 115 ntBASIC3.59□□□□□ -1.83
PKP4Q99569 RNU6-430P-201ENST00000517078 107 ntBASIC3.59□□□□□ -1.83
PKP4Q99569 MTCO2P4-201ENST00000517968 247 ntBASIC3.59□□□□□ -1.83
PKP4Q99569 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.59□□□□□ -1.83
PKP4Q99569 OR4P1P-201ENST00000530808 1136 ntBASIC3.59□□□□□ -1.83
PKP4Q99569 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.59□□□□□ -1.83
PKP4Q99569 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.59□□□□□ -1.83
PKP4Q99569 AC126177.3-201ENST00000551839 688 ntBASIC3.59□□□□□ -1.83
PKP4Q99569 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.59□□□□□ -1.83
PKP4Q99569 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.59□□□□□ -1.83
PKP4Q99569 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.59□□□□□ -1.83
PKP4Q99569 AL133457.1-201ENST00000564251 987 ntBASIC3.59□□□□□ -1.83
PKP4Q99569 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.59□□□□□ -1.83
PKP4Q99569 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.59□□□□□ -1.83
PKP4Q99569 BNIP3P30-201ENST00000601184 574 ntBASIC3.59□□□□□ -1.83
PKP4Q99569 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.59□□□□□ -1.83
PKP4Q99569 AL390240.1-201ENST00000612950 384 ntBASIC3.59□□□□□ -1.83
PKP4Q99569 AC104010.1-201ENST00000616889 150 ntBASIC3.59□□□□□ -1.83
PKP4Q99569 AC091925.2-201ENST00000625059 256 ntBASIC3.59□□□□□ -1.83
PKP4Q99569 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PKP4Q99569 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.59□□□□□ -1.84
PKP4Q99569 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.59□□□□□ -1.84
PKP4Q99569 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
PKP4Q99569 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PKP4Q99569 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
PKP4Q99569 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.58□□□□□ -1.84
PKP4Q99569 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
PKP4Q99569 RNU6-809P-201ENST00000384461 107 ntBASIC3.58□□□□□ -1.84
PKP4Q99569 AL590704.1-201ENST00000402856 794 ntBASIC3.58□□□□□ -1.84
PKP4Q99569 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.58□□□□□ -1.84
PKP4Q99569 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.58□□□□□ -1.84
PKP4Q99569 RN7SKP159-201ENST00000410657 292 ntBASIC3.58□□□□□ -1.84
PKP4Q99569 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.58□□□□□ -1.84
PKP4Q99569 BX890604.2-201ENST00000427883 474 ntBASIC3.58□□□□□ -1.84
PKP4Q99569 DPPA2P1-201ENST00000428060 556 ntBASIC3.58□□□□□ -1.84
PKP4Q99569 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.58□□□□□ -1.84
PKP4Q99569 MTND4LP10-201ENST00000435146 291 ntBASIC3.58□□□□□ -1.84
PKP4Q99569 RPL23AP74-201ENST00000437246 471 ntBASIC3.58□□□□□ -1.84
PKP4Q99569 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.58□□□□□ -1.84
PKP4Q99569 RABEPKP1-201ENST00000440529 1026 ntBASIC3.58□□□□□ -1.84
PKP4Q99569 PGBD4P3-201ENST00000440731 581 ntBASIC3.58□□□□□ -1.84
PKP4Q99569 MTATP6P30-201ENST00000443540 664 ntBASIC3.58□□□□□ -1.84
PKP4Q99569 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PKP4Q99569 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.58□□□□□ -1.84
PKP4Q99569 WASF1P1-201ENST00000447560 1131 ntBASIC3.58□□□□□ -1.84
PKP4Q99569 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.58□□□□□ -1.84
PKP4Q99569 PSPHP1-201ENST00000450062 261 ntBASIC3.58□□□□□ -1.84
PKP4Q99569 USP9YP34-201ENST00000453983 808 ntBASIC3.58□□□□□ -1.84
PKP4Q99569 AC026410.2-201ENST00000460281 156 ntBASIC3.58□□□□□ -1.84
PKP4Q99569 ACTR3P3-201ENST00000480448 893 ntBASIC3.58□□□□□ -1.84
PKP4Q99569 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.58□□□□□ -1.84
PKP4Q99569 TMEM251P1-201ENST00000503717 318 ntBASIC3.58□□□□□ -1.84
PKP4Q99569 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.58□□□□□ -1.84
PKP4Q99569 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.58□□□□□ -1.84
PKP4Q99569 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
PKP4Q99569 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.58□□□□□ -1.84
PKP4Q99569 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.58□□□□□ -1.84
PKP4Q99569 AC099489.2-201ENST00000574976 260 ntBASIC3.58□□□□□ -1.84
PKP4Q99569 AC009977.1-201ENST00000586015 570 ntBASIC3.58□□□□□ -1.84
PKP4Q99569 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.58□□□□□ -1.84
PKP4Q99569 AL161729.4-201ENST00000604650 476 ntBASIC3.58□□□□□ -1.84
PKP4Q99569 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.58□□□□□ -1.84
PKP4Q99569 AL355810.1-201ENST00000614629 552 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms