Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 RNU6-461P-201ENST00000364195 107 ntBASIC1.27□□□□□ -2.21
SPENQ96T58 SNORA79B-201ENST00000410557 148 ntBASIC1.27□□□□□ -2.21
SPENQ96T58 AC092638.1-201ENST00000411966 1275 ntBASIC1.27□□□□□ -2.21
SPENQ96T58 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC1.27□□□□□ -2.21
SPENQ96T58 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.27□□□□□ -2.21
SPENQ96T58 AP002345.1-201ENST00000456493 928 ntBASIC1.27□□□□□ -2.21
SPENQ96T58 RNA5SP121-201ENST00000516537 101 ntBASIC1.27□□□□□ -2.21
SPENQ96T58 CR383656.8-201ENST00000549046 145 ntBASIC1.27□□□□□ -2.21
SPENQ96T58 AC090970.3-201ENST00000612566 866 ntBASIC1.27□□□□□ -2.21
SPENQ96T58 AC104307.1-201ENST00000616142 196 ntBASIC1.27□□□□□ -2.21
SPENQ96T58 AL121594.5-201ENST00000631724 573 ntBASIC1.27□□□□□ -2.21
SPENQ96T58 FO624990.1-201ENST00000636373 85 ntBASIC1.27□□□□□ -2.21
SPENQ96T58 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
SPENQ96T58 VTRNA1-3-201ENST00000365645 89 ntBASIC1.27□□□□□ -2.21
SPENQ96T58 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
SPENQ96T58 AL033519.2-201ENST00000403958 392 ntBASIC1.27□□□□□ -2.21
SPENQ96T58 SETP8-201ENST00000435341 628 ntBASIC1.27□□□□□ -2.21
SPENQ96T58 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
SPENQ96T58 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC1.27□□□□□ -2.21
SPENQ96T58 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC1.27□□□□□ -2.21
SPENQ96T58 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.27□□□□□ -2.21
SPENQ96T58 AC091488.1-201ENST00000604239 660 ntBASIC1.27□□□□□ -2.21
SPENQ96T58 AC103810.8-201ENST00000607347 118 ntBASIC1.27□□□□□ -2.21
SPENQ96T58 AL449363.1-201ENST00000617815 186 ntBASIC1.27□□□□□ -2.21
SPENQ96T58 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.27□□□□□ -2.21
SPENQ96T58 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
SPENQ96T58 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
SPENQ96T58 METTL21EP-201ENST00000298105 713 ntBASIC1.26□□□□□ -2.21
SPENQ96T58 MIR365B-201ENST00000362317 111 ntBASIC1.26□□□□□ -2.21
SPENQ96T58 MIR517C-201ENST00000385103 95 ntBASIC1.26□□□□□ -2.21
SPENQ96T58 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
SPENQ96T58 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.26□□□□□ -2.21
SPENQ96T58 AC079776.3-201ENST00000450665 370 ntBASIC1.26□□□□□ -2.21
SPENQ96T58 AC092902.1-201ENST00000486999 259 ntBASIC1.26□□□□□ -2.21
SPENQ96T58 AC006483.1-201ENST00000487308 313 ntBASIC1.26□□□□□ -2.21
SPENQ96T58 NDUFB4P9-201ENST00000511646 388 ntBASIC1.26□□□□□ -2.21
SPENQ96T58 AC008837.2-201ENST00000513076 418 ntBASIC1.26□□□□□ -2.21
SPENQ96T58 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.26□□□□□ -2.21
SPENQ96T58 AC087373.1-201ENST00000524920 491 ntBASIC1.26□□□□□ -2.21
SPENQ96T58 AC008127.2-201ENST00000549925 1075 ntBASIC1.26□□□□□ -2.21
SPENQ96T58 MIR5000-201ENST00000577717 103 ntBASIC1.26□□□□□ -2.21
SPENQ96T58 AP001005.3-201ENST00000622049 129 ntBASIC1.26□□□□□ -2.21
SPENQ96T58 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.26□□□□□ -2.21
SPENQ96T58 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
SPENQ96T58 AC007390.1-201ENST00000415722 356 ntBASIC1.26□□□□□ -2.21
SPENQ96T58 RPL30P3-201ENST00000424262 333 ntBASIC1.26□□□□□ -2.21
SPENQ96T58 OR10R1P-201ENST00000441524 1141 ntBASIC1.26□□□□□ -2.21
SPENQ96T58 RSL24D1P2-201ENST00000445584 366 ntBASIC1.26□□□□□ -2.21
SPENQ96T58 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.26□□□□□ -2.21
SPENQ96T58 AC105313.1-201ENST00000509121 353 ntBASIC1.26□□□□□ -2.21
SPENQ96T58 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
SPENQ96T58 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.26□□□□□ -2.21
SPENQ96T58 AC021146.7-201ENST00000509604 775 ntBASIC1.26□□□□□ -2.21
SPENQ96T58 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC1.26□□□□□ -2.21
SPENQ96T58 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC1.26□□□□□ -2.21
SPENQ96T58 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.26□□□□□ -2.21
SPENQ96T58 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
SPENQ96T58 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC1.25□□□□□ -2.21
SPENQ96T58 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC1.25□□□□□ -2.21
SPENQ96T58 MTCYBP45-201ENST00000435243 565 ntBASIC1.25□□□□□ -2.21
SPENQ96T58 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.25□□□□□ -2.21
SPENQ96T58 MTCO1P48-201ENST00000448024 1096 ntBASIC1.25□□□□□ -2.21
SPENQ96T58 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC1.25□□□□□ -2.21
SPENQ96T58 U8.1-201ENST00000362843 134 ntBASIC1.25□□□□□ -2.21
SPENQ96T58 Y_RNA.258-201ENST00000364613 105 ntBASIC1.25□□□□□ -2.21
SPENQ96T58 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC1.25□□□□□ -2.21
SPENQ96T58 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC1.25□□□□□ -2.21
SPENQ96T58 AC096772.1-201ENST00000609146 564 ntBASIC1.25□□□□□ -2.21
SPENQ96T58 AL158801.5-201ENST00000623123 465 ntBASIC1.25□□□□□ -2.21
SPENQ96T58 SGO1P2-201ENST00000429458 1589 ntBASIC1.24□□□□□ -2.21
SPENQ96T58 RWDD4P2-201ENST00000426392 563 ntBASIC1.24□□□□□ -2.21
SPENQ96T58 RWDD4P1-201ENST00000488019 565 ntBASIC1.24□□□□□ -2.21
SPENQ96T58 MTND5P4-201ENST00000514978 288 ntBASIC1.24□□□□□ -2.21
SPENQ96T58 OR4K8P-201ENST00000578842 1048 ntBASIC1.24□□□□□ -2.21
SPENQ96T58 AC017076.1-201ENST00000607613 578 ntBASIC1.24□□□□□ -2.21
SPENQ96T58 AC011472.4-201ENST00000615848 491 ntBASIC1.24□□□□□ -2.21
SPENQ96T58 AC011477.1-204ENST00000623416 1325 ntBASIC1.24□□□□□ -2.21
SPENQ96T58 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.24□□□□□ -2.21
SPENQ96T58 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.24□□□□□ -2.21
SPENQ96T58 AC105245.1-201ENST00000581934 244 ntBASIC1.24□□□□□ -2.21
SPENQ96T58 RNU6-492P-201ENST00000363035 104 ntBASIC1.24□□□□□ -2.21
SPENQ96T58 EZH2P1-201ENST00000431167 291 ntBASIC1.24□□□□□ -2.21
SPENQ96T58 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC1.24□□□□□ -2.21
SPENQ96T58 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.24□□□□□ -2.21
SPENQ96T58 RPL7P5-201ENST00000471472 736 ntBASIC1.24□□□□□ -2.21
SPENQ96T58 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC1.24□□□□□ -2.21
SPENQ96T58 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.24□□□□□ -2.21
SPENQ96T58 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.24□□□□□ -2.21
SPENQ96T58 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC1.24□□□□□ -2.21
SPENQ96T58 RFC1-217ENST00000639695 867 ntTSL 5 BASIC1.24□□□□□ -2.21
SPENQ96T58 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.23□□□□□ -2.21
SPENQ96T58 RNU4-91P-201ENST00000364778 135 ntBASIC1.23□□□□□ -2.21
SPENQ96T58 MCTS2P-201ENST00000394552 546 ntBASIC1.23□□□□□ -2.21
SPENQ96T58 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.23□□□□□ -2.21
SPENQ96T58 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.23□□□□□ -2.21
SPENQ96T58 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.23□□□□□ -2.21
SPENQ96T58 SNORD121B-201ENST00000458838 81 ntBASIC1.23□□□□□ -2.21
SPENQ96T58 AC006499.2-201ENST00000513470 337 ntBASIC1.23□□□□□ -2.21
SPENQ96T58 AC008133.2-201ENST00000624540 351 ntBASIC1.23□□□□□ -2.21
SPENQ96T58 SNORA50A-202ENST00000629536 136 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms