Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
CNTNAP3BQ96NU0 RNU6-946P-201ENST00000383878 107 ntBASIC5.44□□□□□ -1.54
CNTNAP3BQ96NU0 RNU1-74P-201ENST00000384108 171 ntBASIC5.44□□□□□ -1.54
CNTNAP3BQ96NU0 Y_RNA.533-201ENST00000384596 114 ntBASIC5.44□□□□□ -1.54
CNTNAP3BQ96NU0 RNU6-651P-201ENST00000411040 105 ntBASIC5.44□□□□□ -1.54
CNTNAP3BQ96NU0 EI24P1-201ENST00000416584 867 ntBASIC5.44□□□□□ -1.54
CNTNAP3BQ96NU0 AC119751.6-201ENST00000416712 186 ntBASIC5.44□□□□□ -1.54
CNTNAP3BQ96NU0 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CNTNAP3BQ96NU0 VTI1BP4-201ENST00000427516 527 ntBASIC5.44□□□□□ -1.54
CNTNAP3BQ96NU0 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.44□□□□□ -1.54
CNTNAP3BQ96NU0 BX679664.1-201ENST00000434429 253 ntBASIC5.44□□□□□ -1.54
CNTNAP3BQ96NU0 AL450023.1-201ENST00000450868 751 ntBASIC5.44□□□□□ -1.54
CNTNAP3BQ96NU0 NUTF2P7-201ENST00000453086 375 ntBASIC5.44□□□□□ -1.54
CNTNAP3BQ96NU0 RPL10P17-201ENST00000453852 316 ntBASIC5.44□□□□□ -1.54
CNTNAP3BQ96NU0 ISCUP1-201ENST00000454451 448 ntBASIC5.44□□□□□ -1.54
CNTNAP3BQ96NU0 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CNTNAP3BQ96NU0 AC053481.1-201ENST00000467217 306 ntBASIC5.44□□□□□ -1.54
CNTNAP3BQ96NU0 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
CNTNAP3BQ96NU0 AC135721.1-201ENST00000497954 479 ntBASIC5.44□□□□□ -1.54
CNTNAP3BQ96NU0 AC093840.1-201ENST00000511599 336 ntBASIC5.44□□□□□ -1.54
CNTNAP3BQ96NU0 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC5.44□□□□□ -1.54
CNTNAP3BQ96NU0 RNU5F-8P-201ENST00000515941 111 ntBASIC5.44□□□□□ -1.54
CNTNAP3BQ96NU0 RNU6-27P-201ENST00000516146 107 ntBASIC5.44□□□□□ -1.54
CNTNAP3BQ96NU0 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.44□□□□□ -1.54
CNTNAP3BQ96NU0 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CNTNAP3BQ96NU0 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC5.44□□□□□ -1.54
CNTNAP3BQ96NU0 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.44□□□□□ -1.54
CNTNAP3BQ96NU0 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.44□□□□□ -1.54
CNTNAP3BQ96NU0 AC073916.1-201ENST00000545095 130 ntBASIC5.44□□□□□ -1.54
CNTNAP3BQ96NU0 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC5.44□□□□□ -1.54
CNTNAP3BQ96NU0 MIR4270-201ENST00000581799 70 ntBASIC5.44□□□□□ -1.54
CNTNAP3BQ96NU0 MIR4298-201ENST00000584380 73 ntBASIC5.44□□□□□ -1.54
CNTNAP3BQ96NU0 AL355812.1-201ENST00000603215 216 ntBASIC5.44□□□□□ -1.54
CNTNAP3BQ96NU0 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC5.44□□□□□ -1.54
CNTNAP3BQ96NU0 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CNTNAP3BQ96NU0 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
CNTNAP3BQ96NU0 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.44□□□□□ -1.54
CNTNAP3BQ96NU0 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.44□□□□□ -1.54
CNTNAP3BQ96NU0 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
CNTNAP3BQ96NU0 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.44□□□□□ -1.54
CNTNAP3BQ96NU0 AC093671.1-201ENST00000624981 2929 ntBASIC5.44□□□□□ -1.54
CNTNAP3BQ96NU0 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
CNTNAP3BQ96NU0 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.44□□□□□ -1.54
CNTNAP3BQ96NU0 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
CNTNAP3BQ96NU0 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
CNTNAP3BQ96NU0 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CNTNAP3BQ96NU0 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CNTNAP3BQ96NU0 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CNTNAP3BQ96NU0 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
CNTNAP3BQ96NU0 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CNTNAP3BQ96NU0 OR9K1P-202ENST00000641111 3217 ntBASIC5.43□□□□□ -1.54
CNTNAP3BQ96NU0 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CNTNAP3BQ96NU0 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CNTNAP3BQ96NU0 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CNTNAP3BQ96NU0 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
CNTNAP3BQ96NU0 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.43□□□□□ -1.54
CNTNAP3BQ96NU0 RNU6-637P-201ENST00000384050 107 ntBASIC5.43□□□□□ -1.54
CNTNAP3BQ96NU0 RNU6-790P-201ENST00000384479 105 ntBASIC5.43□□□□□ -1.54
CNTNAP3BQ96NU0 RNU6-754P-201ENST00000391166 107 ntBASIC5.43□□□□□ -1.54
CNTNAP3BQ96NU0 RN7SKP159-201ENST00000410657 292 ntBASIC5.43□□□□□ -1.54
CNTNAP3BQ96NU0 RPS15AP40-201ENST00000419621 391 ntBASIC5.43□□□□□ -1.54
CNTNAP3BQ96NU0 AC099336.2-201ENST00000422457 254 ntBASIC5.43□□□□□ -1.54
CNTNAP3BQ96NU0 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.43□□□□□ -1.54
CNTNAP3BQ96NU0 HSPE1P25-201ENST00000455484 251 ntBASIC5.43□□□□□ -1.54
CNTNAP3BQ96NU0 AC099560.2-201ENST00000457554 255 ntBASIC5.43□□□□□ -1.54
CNTNAP3BQ96NU0 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.43□□□□□ -1.54
CNTNAP3BQ96NU0 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC5.43□□□□□ -1.54
CNTNAP3BQ96NU0 AC092490.3-201ENST00000545370 572 ntBASIC5.43□□□□□ -1.54
CNTNAP3BQ96NU0 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC5.43□□□□□ -1.54
CNTNAP3BQ96NU0 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.43□□□□□ -1.54
CNTNAP3BQ96NU0 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC5.43□□□□□ -1.54
CNTNAP3BQ96NU0 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC5.43□□□□□ -1.54
CNTNAP3BQ96NU0 AC120057.2-201ENST00000571520 271 ntBASIC5.43□□□□□ -1.54
CNTNAP3BQ96NU0 AL162431.4-201ENST00000604674 411 ntBASIC5.43□□□□□ -1.54
CNTNAP3BQ96NU0 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC5.43□□□□□ -1.54
CNTNAP3BQ96NU0 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC5.43□□□□□ -1.54
CNTNAP3BQ96NU0 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC5.43□□□□□ -1.54
CNTNAP3BQ96NU0 AL132640.3-201ENST00000630473 177 ntBASIC5.43□□□□□ -1.54
CNTNAP3BQ96NU0 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CNTNAP3BQ96NU0 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CNTNAP3BQ96NU0 AL137003.2-201ENST00000606924 2538 ntBASIC5.43□□□□□ -1.54
CNTNAP3BQ96NU0 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CNTNAP3BQ96NU0 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CNTNAP3BQ96NU0 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.43□□□□□ -1.54
CNTNAP3BQ96NU0 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CNTNAP3BQ96NU0 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CNTNAP3BQ96NU0 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.43□□□□□ -1.54
CNTNAP3BQ96NU0 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.43□□□□□ -1.54
CNTNAP3BQ96NU0 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.43□□□□□ -1.54
CNTNAP3BQ96NU0 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
CNTNAP3BQ96NU0 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.42□□□□□ -1.54
CNTNAP3BQ96NU0 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
CNTNAP3BQ96NU0 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
CNTNAP3BQ96NU0 INTS6P1-201ENST00000504674 2530 ntBASIC5.42□□□□□ -1.54
CNTNAP3BQ96NU0 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CNTNAP3BQ96NU0 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CNTNAP3BQ96NU0 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
CNTNAP3BQ96NU0 Y_RNA.215-201ENST00000364204 112 ntBASIC5.42□□□□□ -1.54
CNTNAP3BQ96NU0 RNU6-898P-201ENST00000365627 104 ntBASIC5.42□□□□□ -1.54
CNTNAP3BQ96NU0 CRP-202ENST00000368110 667 ntTSL 3 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms