Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AL031183.1-201ENST00000457667 207 ntBASIC3.29□□□□□ -1.88
VPS33AQ96AX1 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.29□□□□□ -1.88
VPS33AQ96AX1 AC104472.2-201ENST00000469035 601 ntBASIC3.29□□□□□ -1.88
VPS33AQ96AX1 AC034236.1-201ENST00000469891 373 ntBASIC3.29□□□□□ -1.88
VPS33AQ96AX1 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC3.29□□□□□ -1.88
VPS33AQ96AX1 MTND1P22-201ENST00000510572 951 ntBASIC3.29□□□□□ -1.88
VPS33AQ96AX1 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.29□□□□□ -1.88
VPS33AQ96AX1 SNORA64.4-201ENST00000516632 81 ntBASIC3.29□□□□□ -1.88
VPS33AQ96AX1 RNU6-1003P-201ENST00000517099 105 ntBASIC3.29□□□□□ -1.88
VPS33AQ96AX1 Y_RNA.717-201ENST00000517106 92 ntBASIC3.29□□□□□ -1.88
VPS33AQ96AX1 MIR2116-201ENST00000517221 80 ntBASIC3.29□□□□□ -1.88
VPS33AQ96AX1 AC100870.1-201ENST00000522035 505 ntBASIC3.29□□□□□ -1.88
VPS33AQ96AX1 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.29□□□□□ -1.88
VPS33AQ96AX1 ATP5F1P5-201ENST00000526403 760 ntBASIC3.29□□□□□ -1.88
VPS33AQ96AX1 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
VPS33AQ96AX1 AP000907.2-201ENST00000530827 353 ntBASIC3.29□□□□□ -1.88
VPS33AQ96AX1 DNAJC8P1-201ENST00000554535 372 ntBASIC3.29□□□□□ -1.88
VPS33AQ96AX1 MIR5685-201ENST00000579080 79 ntBASIC3.29□□□□□ -1.88
VPS33AQ96AX1 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.29□□□□□ -1.88
VPS33AQ96AX1 AC103710.1-201ENST00000610003 901 ntBASIC3.29□□□□□ -1.88
VPS33AQ96AX1 AC004223.4-201ENST00000612426 332 ntBASIC3.29□□□□□ -1.88
VPS33AQ96AX1 AC004696.1-201ENST00000614345 607 ntBASIC3.29□□□□□ -1.88
VPS33AQ96AX1 AC140725.3-201ENST00000616193 880 ntBASIC3.29□□□□□ -1.88
VPS33AQ96AX1 AC009159.2-201ENST00000617603 606 ntBASIC3.29□□□□□ -1.88
VPS33AQ96AX1 AC006927.3-201ENST00000638789 384 ntBASIC3.29□□□□□ -1.88
VPS33AQ96AX1 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.29□□□□□ -1.88
VPS33AQ96AX1 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.29□□□□□ -1.88
VPS33AQ96AX1 AC032011.1-201ENST00000611703 1549 ntBASIC3.29□□□□□ -1.88
VPS33AQ96AX1 AC004972.1-201ENST00000623934 2209 ntBASIC3.28□□□□□ -1.88
VPS33AQ96AX1 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.28□□□□□ -1.88
VPS33AQ96AX1 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
VPS33AQ96AX1 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
VPS33AQ96AX1 Y_RNA.97-201ENST00000363094 102 ntBASIC3.28□□□□□ -1.88
VPS33AQ96AX1 RNU6-799P-201ENST00000363567 107 ntBASIC3.28□□□□□ -1.88
VPS33AQ96AX1 RNU5A-8P-201ENST00000364102 114 ntBASIC3.28□□□□□ -1.88
VPS33AQ96AX1 SNORA70.2-201ENST00000364506 135 ntBASIC3.28□□□□□ -1.88
VPS33AQ96AX1 RNU1-64P-201ENST00000365443 163 ntBASIC3.28□□□□□ -1.88
VPS33AQ96AX1 MIR325-201ENST00000385260 98 ntBASIC3.28□□□□□ -1.88
VPS33AQ96AX1 SAR1AP2-201ENST00000392696 594 ntBASIC3.28□□□□□ -1.88
VPS33AQ96AX1 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
VPS33AQ96AX1 RPL17P12-201ENST00000413391 526 ntBASIC3.28□□□□□ -1.88
VPS33AQ96AX1 AC126124.2-201ENST00000413542 321 ntBASIC3.28□□□□□ -1.88
VPS33AQ96AX1 RPL21P24-201ENST00000413752 448 ntBASIC3.28□□□□□ -1.88
VPS33AQ96AX1 Z99755.1-201ENST00000414048 380 ntBASIC3.28□□□□□ -1.88
VPS33AQ96AX1 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.28□□□□□ -1.88
VPS33AQ96AX1 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.28□□□□□ -1.88
VPS33AQ96AX1 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.28□□□□□ -1.88
VPS33AQ96AX1 AC092047.1-201ENST00000424997 240 ntBASIC3.28□□□□□ -1.88
VPS33AQ96AX1 GOT2P5-201ENST00000433995 546 ntBASIC3.28□□□□□ -1.88
VPS33AQ96AX1 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.28□□□□□ -1.88
VPS33AQ96AX1 RPL37P21-201ENST00000435890 276 ntBASIC3.28□□□□□ -1.88
VPS33AQ96AX1 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.28□□□□□ -1.88
VPS33AQ96AX1 AL049734.2-201ENST00000441066 616 ntBASIC3.28□□□□□ -1.88
VPS33AQ96AX1 BNIP3P2-201ENST00000441221 577 ntBASIC3.28□□□□□ -1.88
VPS33AQ96AX1 AC097262.1-201ENST00000452559 548 ntBASIC3.28□□□□□ -1.88
VPS33AQ96AX1 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.28□□□□□ -1.88
VPS33AQ96AX1 AC108059.3-201ENST00000456388 214 ntBASIC3.28□□□□□ -1.88
VPS33AQ96AX1 AC092798.1-201ENST00000458542 409 ntBASIC3.28□□□□□ -1.88
VPS33AQ96AX1 RPL7P5-201ENST00000471472 736 ntBASIC3.28□□□□□ -1.88
VPS33AQ96AX1 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.28□□□□□ -1.88
VPS33AQ96AX1 MTND4LP22-201ENST00000508209 276 ntBASIC3.28□□□□□ -1.88
VPS33AQ96AX1 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.28□□□□□ -1.88
VPS33AQ96AX1 OR5BM1P-201ENST00000512021 366 ntBASIC3.28□□□□□ -1.88
VPS33AQ96AX1 NPM1P41-201ENST00000512920 831 ntBASIC3.28□□□□□ -1.88
VPS33AQ96AX1 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.28□□□□□ -1.88
VPS33AQ96AX1 MTCO1P49-201ENST00000523429 802 ntBASIC3.28□□□□□ -1.88
VPS33AQ96AX1 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.28□□□□□ -1.88
VPS33AQ96AX1 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.28□□□□□ -1.88
VPS33AQ96AX1 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.28□□□□□ -1.88
VPS33AQ96AX1 AC007224.1-201ENST00000564410 144 ntBASIC3.28□□□□□ -1.88
VPS33AQ96AX1 PCMTD1P2-201ENST00000565017 355 ntBASIC3.28□□□□□ -1.88
VPS33AQ96AX1 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.28□□□□□ -1.88
VPS33AQ96AX1 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.28□□□□□ -1.88
VPS33AQ96AX1 AL133393.1-201ENST00000603277 287 ntBASIC3.28□□□□□ -1.88
VPS33AQ96AX1 AC067959.1-201ENST00000604334 379 ntBASIC3.28□□□□□ -1.88
VPS33AQ96AX1 AL161729.4-201ENST00000604650 476 ntBASIC3.28□□□□□ -1.88
VPS33AQ96AX1 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.28□□□□□ -1.88
VPS33AQ96AX1 AL355493.4-201ENST00000618530 292 ntBASIC3.28□□□□□ -1.88
VPS33AQ96AX1 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.28□□□□□ -1.88
VPS33AQ96AX1 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.28□□□□□ -1.88
VPS33AQ96AX1 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
VPS33AQ96AX1 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
VPS33AQ96AX1 AC017071.1-201ENST00000564407 2204 ntBASIC3.28□□□□□ -1.88
VPS33AQ96AX1 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.89
VPS33AQ96AX1 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.28□□□□□ -1.89
VPS33AQ96AX1 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
VPS33AQ96AX1 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.27□□□□□ -1.89
VPS33AQ96AX1 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
VPS33AQ96AX1 MIR148B-201ENST00000362252 99 ntBASIC3.27□□□□□ -1.89
VPS33AQ96AX1 DYNLT3P1-201ENST00000378574 347 ntBASIC3.27□□□□□ -1.89
VPS33AQ96AX1 RN7SKP159-201ENST00000410657 292 ntBASIC3.27□□□□□ -1.89
VPS33AQ96AX1 ATP5A1P2-201ENST00000412323 255 ntBASIC3.27□□□□□ -1.89
VPS33AQ96AX1 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
VPS33AQ96AX1 VPS26BP1-201ENST00000417155 755 ntBASIC3.27□□□□□ -1.89
VPS33AQ96AX1 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.27□□□□□ -1.89
VPS33AQ96AX1 AC091390.3-201ENST00000426478 338 ntBASIC3.27□□□□□ -1.89
VPS33AQ96AX1 AC004975.1-201ENST00000428733 208 ntBASIC3.27□□□□□ -1.89
VPS33AQ96AX1 OR2B8P-201ENST00000432841 938 ntBASIC3.27□□□□□ -1.89
VPS33AQ96AX1 AC009969.1-201ENST00000438726 172 ntBASIC3.27□□□□□ -1.89
VPS33AQ96AX1 AC005094.1-201ENST00000440420 368 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 137.6 ms