Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AP005901.5-201ENST00000545779 1796 ntBASIC0.6□□□□□ -2.31
SYNE1Q8NF91 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
SYNE1Q8NF91 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
SYNE1Q8NF91 RNU1-123P-201ENST00000458950 160 ntBASIC0.6□□□□□ -2.31
SYNE1Q8NF91 RPL38P4-201ENST00000502376 214 ntBASIC0.6□□□□□ -2.31
SYNE1Q8NF91 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC0.6□□□□□ -2.31
SYNE1Q8NF91 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC0.6□□□□□ -2.31
SYNE1Q8NF91 AC087441.2-201ENST00000529141 262 ntBASIC0.6□□□□□ -2.31
SYNE1Q8NF91 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.6□□□□□ -2.31
SYNE1Q8NF91 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC0.6□□□□□ -2.31
SYNE1Q8NF91 Z99129.2-201ENST00000619967 314 ntBASIC0.6□□□□□ -2.31
SYNE1Q8NF91 MIR6766-201ENST00000622641 72 ntBASIC0.6□□□□□ -2.31
SYNE1Q8NF91 AC002064.3-201ENST00000623448 346 ntBASIC0.6□□□□□ -2.31
SYNE1Q8NF91 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC0.6□□□□□ -2.31
SYNE1Q8NF91 DCAF13P1-201ENST00000495256 1330 ntBASIC0.6□□□□□ -2.31
SYNE1Q8NF91 AC009541.1-201ENST00000438279 2662 ntBASIC0.6□□□□□ -2.31
SYNE1Q8NF91 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC0.6□□□□□ -2.31
SYNE1Q8NF91 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
SYNE1Q8NF91 SNORA70.7-201ENST00000384159 133 ntBASIC0.6□□□□□ -2.31
SYNE1Q8NF91 RNU6ATAC16P-201ENST00000408591 138 ntBASIC0.6□□□□□ -2.31
SYNE1Q8NF91 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC0.6□□□□□ -2.31
SYNE1Q8NF91 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC0.6□□□□□ -2.31
SYNE1Q8NF91 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC0.6□□□□□ -2.31
SYNE1Q8NF91 AC108157.1-201ENST00000510511 539 ntBASIC0.6□□□□□ -2.31
SYNE1Q8NF91 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC0.6□□□□□ -2.31
SYNE1Q8NF91 AP003717.3-201ENST00000544832 1180 ntBASIC0.6□□□□□ -2.31
SYNE1Q8NF91 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC0.6□□□□□ -2.31
SYNE1Q8NF91 AC013468.1-201ENST00000608680 598 ntBASIC0.6□□□□□ -2.31
SYNE1Q8NF91 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC0.6□□□□□ -2.31
SYNE1Q8NF91 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC0.6□□□□□ -2.31
SYNE1Q8NF91 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
SYNE1Q8NF91 RNU6-174P-201ENST00000410406 106 ntBASIC0.6□□□□□ -2.31
SYNE1Q8NF91 MTND1P23-201ENST00000416931 372 ntBASIC0.6□□□□□ -2.31
SYNE1Q8NF91 AC009237.2-201ENST00000421358 284 ntBASIC0.6□□□□□ -2.31
SYNE1Q8NF91 OR4K11P-201ENST00000431829 904 ntBASIC0.6□□□□□ -2.31
SYNE1Q8NF91 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC0.6□□□□□ -2.31
SYNE1Q8NF91 RPS15AP7-201ENST00000439294 405 ntBASIC0.6□□□□□ -2.31
SYNE1Q8NF91 NF1P3-201ENST00000457709 450 ntBASIC0.6□□□□□ -2.31
SYNE1Q8NF91 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
SYNE1Q8NF91 AL135752.1-201ENST00000479477 471 ntBASIC0.6□□□□□ -2.31
SYNE1Q8NF91 AC023050.1-201ENST00000498198 304 ntBASIC0.6□□□□□ -2.31
SYNE1Q8NF91 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC0.6□□□□□ -2.31
SYNE1Q8NF91 Y_RNA.681-201ENST00000516445 113 ntBASIC0.6□□□□□ -2.31
SYNE1Q8NF91 AC067805.1-201ENST00000559344 470 ntBASIC0.6□□□□□ -2.31
SYNE1Q8NF91 AMZ2P1-203ENST00000565833 850 ntBASIC0.6□□□□□ -2.31
SYNE1Q8NF91 uc_338.5-201ENST00000611839 155 ntBASIC0.6□□□□□ -2.31
SYNE1Q8NF91 AC140725.3-201ENST00000616193 880 ntBASIC0.6□□□□□ -2.31
SYNE1Q8NF91 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC0.6□□□□□ -2.31
SYNE1Q8NF91 AC012321.1-201ENST00000561622 1588 ntBASIC0.6□□□□□ -2.31
SYNE1Q8NF91 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC0.59□□□□□ -2.31
SYNE1Q8NF91 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
SYNE1Q8NF91 AC240504.1-201ENST00000395709 845 ntBASIC0.59□□□□□ -2.31
SYNE1Q8NF91 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC0.59□□□□□ -2.31
SYNE1Q8NF91 AL034418.1-201ENST00000448675 860 ntBASIC0.59□□□□□ -2.31
SYNE1Q8NF91 AC090255.1-201ENST00000495779 349 ntBASIC0.59□□□□□ -2.31
SYNE1Q8NF91 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC0.59□□□□□ -2.31
SYNE1Q8NF91 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC0.59□□□□□ -2.31
SYNE1Q8NF91 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC0.59□□□□□ -2.31
SYNE1Q8NF91 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
SYNE1Q8NF91 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
SYNE1Q8NF91 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
SYNE1Q8NF91 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
SYNE1Q8NF91 Y_RNA.327-201ENST00000365201 102 ntBASIC0.59□□□□□ -2.31
SYNE1Q8NF91 SET-203ENST00000372688 801 ntTSL 2 BASIC0.59□□□□□ -2.31
SYNE1Q8NF91 SNORA48.3-201ENST00000391081 134 ntBASIC0.59□□□□□ -2.31
SYNE1Q8NF91 AC008173.1-201ENST00000418901 264 ntBASIC0.59□□□□□ -2.31
SYNE1Q8NF91 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.59□□□□□ -2.31
SYNE1Q8NF91 AL358453.1-201ENST00000422522 250 ntBASIC0.59□□□□□ -2.31
SYNE1Q8NF91 RPL31P20-201ENST00000449593 360 ntBASIC0.59□□□□□ -2.31
SYNE1Q8NF91 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC0.59□□□□□ -2.31
SYNE1Q8NF91 RPL23AP41-201ENST00000484754 458 ntBASIC0.59□□□□□ -2.31
SYNE1Q8NF91 ARL4AP2-201ENST00000507378 601 ntBASIC0.59□□□□□ -2.31
SYNE1Q8NF91 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC0.59□□□□□ -2.31
SYNE1Q8NF91 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC0.59□□□□□ -2.31
SYNE1Q8NF91 DNAJC19P9-201ENST00000555084 351 ntBASIC0.59□□□□□ -2.31
SYNE1Q8NF91 MIR5089-201ENST00000580047 84 ntBASIC0.59□□□□□ -2.31
SYNE1Q8NF91 AC245128.3-201ENST00000594721 748 ntBASIC0.59□□□□□ -2.31
SYNE1Q8NF91 AC121761.2-201ENST00000617300 689 ntBASIC0.59□□□□□ -2.31
SYNE1Q8NF91 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC0.59□□□□□ -2.31
SYNE1Q8NF91 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC0.59□□□□□ -2.31
SYNE1Q8NF91 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
SYNE1Q8NF91 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.59□□□□□ -2.31
SYNE1Q8NF91 AL354685.2-201ENST00000448218 1447 ntBASIC0.59□□□□□ -2.31
SYNE1Q8NF91 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC0.59□□□□□ -2.31
SYNE1Q8NF91 RNA5SP139-201ENST00000364340 117 ntBASIC0.59□□□□□ -2.31
SYNE1Q8NF91 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC0.59□□□□□ -2.31
SYNE1Q8NF91 AC005517.2-201ENST00000424673 553 ntBASIC0.59□□□□□ -2.31
SYNE1Q8NF91 CKS1BP5-201ENST00000434172 273 ntBASIC0.59□□□□□ -2.31
SYNE1Q8NF91 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC0.59□□□□□ -2.31
SYNE1Q8NF91 RPL23AP55-201ENST00000498163 452 ntBASIC0.59□□□□□ -2.31
SYNE1Q8NF91 RPL23AP63-201ENST00000498752 471 ntBASIC0.59□□□□□ -2.31
SYNE1Q8NF91 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC0.59□□□□□ -2.31
SYNE1Q8NF91 FAM157B-203ENST00000639350 358 ntBASIC0.59□□□□□ -2.31
SYNE1Q8NF91 RNU6-1032P-201ENST00000384100 107 ntBASIC0.59□□□□□ -2.31
SYNE1Q8NF91 RNU6-882P-201ENST00000391025 103 ntBASIC0.59□□□□□ -2.31
SYNE1Q8NF91 RPS3AP9-201ENST00000417027 792 ntBASIC0.59□□□□□ -2.31
SYNE1Q8NF91 AC025033.1-201ENST00000463883 194 ntBASIC0.59□□□□□ -2.31
SYNE1Q8NF91 SNORD59.2-201ENST00000516873 68 ntBASIC0.59□□□□□ -2.31
SYNE1Q8NF91 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC0.59□□□□□ -2.31
SYNE1Q8NF91 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms