Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.56□□□□□ -1.68
ARHGEF39Q8N4T4 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.56□□□□□ -1.68
ARHGEF39Q8N4T4 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
ARHGEF39Q8N4T4 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
ARHGEF39Q8N4T4 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
ARHGEF39Q8N4T4 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
ARHGEF39Q8N4T4 Y_RNA.28-201ENST00000362554 111 ntBASIC4.56□□□□□ -1.68
ARHGEF39Q8N4T4 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
ARHGEF39Q8N4T4 MIR585-201ENST00000384887 94 ntBASIC4.56□□□□□ -1.68
ARHGEF39Q8N4T4 CTSL3P-202ENST00000412179 788 ntBASIC4.56□□□□□ -1.68
ARHGEF39Q8N4T4 RPS12P24-201ENST00000412619 387 ntBASIC4.56□□□□□ -1.68
ARHGEF39Q8N4T4 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC4.56□□□□□ -1.68
ARHGEF39Q8N4T4 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.56□□□□□ -1.68
ARHGEF39Q8N4T4 ATG3P1-201ENST00000419507 911 ntBASIC4.56□□□□□ -1.68
ARHGEF39Q8N4T4 BX842559.1-201ENST00000419615 532 ntBASIC4.56□□□□□ -1.68
ARHGEF39Q8N4T4 TXNP1-201ENST00000441872 371 ntBASIC4.56□□□□□ -1.68
ARHGEF39Q8N4T4 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.56□□□□□ -1.68
ARHGEF39Q8N4T4 TDGF1P1-201ENST00000445734 527 ntBASIC4.56□□□□□ -1.68
ARHGEF39Q8N4T4 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.56□□□□□ -1.68
ARHGEF39Q8N4T4 AC008264.1-201ENST00000447612 367 ntBASIC4.56□□□□□ -1.68
ARHGEF39Q8N4T4 PRDX3P3-201ENST00000447765 522 ntBASIC4.56□□□□□ -1.68
ARHGEF39Q8N4T4 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.56□□□□□ -1.68
ARHGEF39Q8N4T4 AC090686.1-201ENST00000481577 749 ntBASIC4.56□□□□□ -1.68
ARHGEF39Q8N4T4 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC4.56□□□□□ -1.68
ARHGEF39Q8N4T4 AC023424.1-201ENST00000496058 459 ntBASIC4.56□□□□□ -1.68
ARHGEF39Q8N4T4 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
ARHGEF39Q8N4T4 RNU1-54P-201ENST00000517181 120 ntBASIC4.56□□□□□ -1.68
ARHGEF39Q8N4T4 RNU6-709P-201ENST00000517257 104 ntBASIC4.56□□□□□ -1.68
ARHGEF39Q8N4T4 AC022634.1-201ENST00000520765 532 ntBASIC4.56□□□□□ -1.68
ARHGEF39Q8N4T4 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.56□□□□□ -1.68
ARHGEF39Q8N4T4 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.56□□□□□ -1.68
ARHGEF39Q8N4T4 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.56□□□□□ -1.68
ARHGEF39Q8N4T4 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.56□□□□□ -1.68
ARHGEF39Q8N4T4 AC093249.4-201ENST00000564755 259 ntBASIC4.56□□□□□ -1.68
ARHGEF39Q8N4T4 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC4.56□□□□□ -1.68
ARHGEF39Q8N4T4 SNORA74C-1-201ENST00000580726 201 ntBASIC4.56□□□□□ -1.68
ARHGEF39Q8N4T4 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC4.56□□□□□ -1.68
ARHGEF39Q8N4T4 AC136443.5-201ENST00000603741 370 ntBASIC4.56□□□□□ -1.68
ARHGEF39Q8N4T4 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.56□□□□□ -1.68
ARHGEF39Q8N4T4 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
ARHGEF39Q8N4T4 RNA5SP108-201ENST00000605921 117 ntBASIC4.56□□□□□ -1.68
ARHGEF39Q8N4T4 HMGN2P28-201ENST00000606102 262 ntBASIC4.56□□□□□ -1.68
ARHGEF39Q8N4T4 FAM27B-201ENST00000610601 213 ntBASIC4.56□□□□□ -1.68
ARHGEF39Q8N4T4 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC4.56□□□□□ -1.68
ARHGEF39Q8N4T4 MIR6780A-201ENST00000615089 68 ntBASIC4.56□□□□□ -1.68
ARHGEF39Q8N4T4 RMST_9.1-201ENST00000619945 193 ntBASIC4.56□□□□□ -1.68
ARHGEF39Q8N4T4 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.56□□□□□ -1.68
ARHGEF39Q8N4T4 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
ARHGEF39Q8N4T4 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
ARHGEF39Q8N4T4 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
ARHGEF39Q8N4T4 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
ARHGEF39Q8N4T4 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.56□□□□□ -1.68
ARHGEF39Q8N4T4 SMG1P4-204ENST00000523028 4131 ntBASIC4.56□□□□□ -1.68
ARHGEF39Q8N4T4 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
ARHGEF39Q8N4T4 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
ARHGEF39Q8N4T4 AC022893.2-201ENST00000564832 3296 ntBASIC4.55□□□□□ -1.68
ARHGEF39Q8N4T4 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
ARHGEF39Q8N4T4 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
ARHGEF39Q8N4T4 RNU6-45P-201ENST00000384471 107 ntBASIC4.55□□□□□ -1.68
ARHGEF39Q8N4T4 RNU6-310P-201ENST00000384655 107 ntBASIC4.55□□□□□ -1.68
ARHGEF39Q8N4T4 RNU4-25P-201ENST00000410569 230 ntBASIC4.55□□□□□ -1.68
ARHGEF39Q8N4T4 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC4.55□□□□□ -1.68
ARHGEF39Q8N4T4 RPS12P23-201ENST00000419579 400 ntBASIC4.55□□□□□ -1.68
ARHGEF39Q8N4T4 PMCHL1-202ENST00000423102 261 ntBASIC4.55□□□□□ -1.68
ARHGEF39Q8N4T4 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC4.55□□□□□ -1.68
ARHGEF39Q8N4T4 FABP7P2-201ENST00000429946 379 ntBASIC4.55□□□□□ -1.68
ARHGEF39Q8N4T4 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.55□□□□□ -1.68
ARHGEF39Q8N4T4 AL137792.2-201ENST00000443484 235 ntBASIC4.55□□□□□ -1.68
ARHGEF39Q8N4T4 OR1H1P-201ENST00000448731 937 ntBASIC4.55□□□□□ -1.68
ARHGEF39Q8N4T4 AC117503.1-201ENST00000472241 394 ntBASIC4.55□□□□□ -1.68
ARHGEF39Q8N4T4 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.55□□□□□ -1.68
ARHGEF39Q8N4T4 AC091868.1-201ENST00000508746 304 ntBASIC4.55□□□□□ -1.68
ARHGEF39Q8N4T4 SNORA31.3-201ENST00000516029 96 ntBASIC4.55□□□□□ -1.68
ARHGEF39Q8N4T4 RN7SKP276-201ENST00000516242 268 ntBASIC4.55□□□□□ -1.68
ARHGEF39Q8N4T4 RNU6-1016P-201ENST00000516689 94 ntBASIC4.55□□□□□ -1.68
ARHGEF39Q8N4T4 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC4.55□□□□□ -1.68
ARHGEF39Q8N4T4 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.55□□□□□ -1.68
ARHGEF39Q8N4T4 AL355836.1-201ENST00000555951 870 ntBASIC4.55□□□□□ -1.68
ARHGEF39Q8N4T4 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
ARHGEF39Q8N4T4 RN7SL690P-201ENST00000582087 240 ntBASIC4.55□□□□□ -1.68
ARHGEF39Q8N4T4 AL353748.2-201ENST00000622148 471 ntBASIC4.55□□□□□ -1.68
ARHGEF39Q8N4T4 AL669831.3-213ENST00000636676 183 ntBASIC4.55□□□□□ -1.68
ARHGEF39Q8N4T4 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
ARHGEF39Q8N4T4 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
ARHGEF39Q8N4T4 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
ARHGEF39Q8N4T4 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
ARHGEF39Q8N4T4 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
ARHGEF39Q8N4T4 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
ARHGEF39Q8N4T4 AL049641.1-201ENST00000441055 1948 ntBASIC4.54□□□□□ -1.68
ARHGEF39Q8N4T4 AL365440.1-201ENST00000436135 2167 ntBASIC4.54□□□□□ -1.68
ARHGEF39Q8N4T4 ZFRP1-201ENST00000457579 2970 ntBASIC4.54□□□□□ -1.68
ARHGEF39Q8N4T4 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
ARHGEF39Q8N4T4 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
ARHGEF39Q8N4T4 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
ARHGEF39Q8N4T4 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
ARHGEF39Q8N4T4 DHX9P1-201ENST00000436565 3076 ntBASIC4.54□□□□□ -1.68
ARHGEF39Q8N4T4 AL445189.1-201ENST00000405722 338 ntBASIC4.54□□□□□ -1.68
ARHGEF39Q8N4T4 U3.35-201ENST00000408405 208 ntBASIC4.54□□□□□ -1.68
ARHGEF39Q8N4T4 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC4.54□□□□□ -1.68
ARHGEF39Q8N4T4 E2F6P2-201ENST00000420708 748 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms