Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC5.37□□□□□ -1.55
DEPDC4Q8N2C3 AC109479.2-201ENST00000517842 174 ntBASIC5.37□□□□□ -1.55
DEPDC4Q8N2C3 AP004371.1-201ENST00000525240 214 ntBASIC5.37□□□□□ -1.55
DEPDC4Q8N2C3 HIGD1AP5-201ENST00000529959 259 ntBASIC5.37□□□□□ -1.55
DEPDC4Q8N2C3 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.37□□□□□ -1.55
DEPDC4Q8N2C3 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.37□□□□□ -1.55
DEPDC4Q8N2C3 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.37□□□□□ -1.55
DEPDC4Q8N2C3 AL049839.1-201ENST00000556151 657 ntBASIC5.37□□□□□ -1.55
DEPDC4Q8N2C3 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.37□□□□□ -1.55
DEPDC4Q8N2C3 HMGB2P1-201ENST00000591146 634 ntBASIC5.37□□□□□ -1.55
DEPDC4Q8N2C3 AL645944.1-201ENST00000603857 493 ntBASIC5.37□□□□□ -1.55
DEPDC4Q8N2C3 RNU6-6P-201ENST00000606623 107 ntBASIC5.37□□□□□ -1.55
DEPDC4Q8N2C3 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.37□□□□□ -1.55
DEPDC4Q8N2C3 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC5.37□□□□□ -1.55
DEPDC4Q8N2C3 AL360181.4-201ENST00000621752 134 ntBASIC5.37□□□□□ -1.55
DEPDC4Q8N2C3 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.37□□□□□ -1.55
DEPDC4Q8N2C3 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC5.37□□□□□ -1.55
DEPDC4Q8N2C3 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
DEPDC4Q8N2C3 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
DEPDC4Q8N2C3 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.37□□□□□ -1.55
DEPDC4Q8N2C3 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
DEPDC4Q8N2C3 AC004817.4-201ENST00000602396 3625 ntBASIC5.37□□□□□ -1.55
DEPDC4Q8N2C3 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
DEPDC4Q8N2C3 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
DEPDC4Q8N2C3 AP001029.2-203ENST00000589795 4910 ntBASIC5.36□□□□□ -1.55
DEPDC4Q8N2C3 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
DEPDC4Q8N2C3 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
DEPDC4Q8N2C3 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
DEPDC4Q8N2C3 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
DEPDC4Q8N2C3 AC007685.1-201ENST00000329806 452 ntBASIC5.36□□□□□ -1.55
DEPDC4Q8N2C3 SNORA21-201ENST00000362423 132 ntBASIC5.36□□□□□ -1.55
DEPDC4Q8N2C3 U3.7-201ENST00000363668 216 ntBASIC5.36□□□□□ -1.55
DEPDC4Q8N2C3 Y_RNA.183-201ENST00000363882 113 ntBASIC5.36□□□□□ -1.55
DEPDC4Q8N2C3 SNORD14B-201ENST00000364533 90 ntBASIC5.36□□□□□ -1.55
DEPDC4Q8N2C3 SNORA70.6-201ENST00000383934 134 ntBASIC5.36□□□□□ -1.55
DEPDC4Q8N2C3 RNU1-136P-201ENST00000384181 164 ntBASIC5.36□□□□□ -1.55
DEPDC4Q8N2C3 RNA5SP91-201ENST00000390902 119 ntBASIC5.36□□□□□ -1.55
DEPDC4Q8N2C3 RNU6-1093P-201ENST00000391194 107 ntBASIC5.36□□□□□ -1.55
DEPDC4Q8N2C3 MTCYBP2-201ENST00000407745 171 ntBASIC5.36□□□□□ -1.55
DEPDC4Q8N2C3 AC079809.1-201ENST00000415468 276 ntBASIC5.36□□□□□ -1.55
DEPDC4Q8N2C3 RPL35AP31-201ENST00000418340 337 ntBASIC5.36□□□□□ -1.55
DEPDC4Q8N2C3 AL117339.3-201ENST00000418733 162 ntBASIC5.36□□□□□ -1.55
DEPDC4Q8N2C3 NDUFB4P7-201ENST00000423198 363 ntBASIC5.36□□□□□ -1.55
DEPDC4Q8N2C3 AC079780.1-201ENST00000428259 207 ntBASIC5.36□□□□□ -1.55
DEPDC4Q8N2C3 AC092423.1-201ENST00000430165 186 ntBASIC5.36□□□□□ -1.55
DEPDC4Q8N2C3 AL627311.1-201ENST00000431514 115 ntBASIC5.36□□□□□ -1.55
DEPDC4Q8N2C3 PNKDP1-201ENST00000435914 430 ntBASIC5.36□□□□□ -1.55
DEPDC4Q8N2C3 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC5.36□□□□□ -1.55
DEPDC4Q8N2C3 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.36□□□□□ -1.55
DEPDC4Q8N2C3 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.36□□□□□ -1.55
DEPDC4Q8N2C3 AL391987.1-201ENST00000441025 200 ntBASIC5.36□□□□□ -1.55
DEPDC4Q8N2C3 SUMO1P2-201ENST00000452524 304 ntBASIC5.36□□□□□ -1.55
DEPDC4Q8N2C3 AC023141.9-201ENST00000458734 412 ntBASIC5.36□□□□□ -1.55
DEPDC4Q8N2C3 CREM-226ENST00000469949 721 ntTSL 3 BASIC5.36□□□□□ -1.55
DEPDC4Q8N2C3 RN7SL799P-201ENST00000475891 298 ntBASIC5.36□□□□□ -1.55
DEPDC4Q8N2C3 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.36□□□□□ -1.55
DEPDC4Q8N2C3 AC025465.3-201ENST00000510570 311 ntBASIC5.36□□□□□ -1.55
DEPDC4Q8N2C3 AC008958.1-201ENST00000511047 682 ntBASIC5.36□□□□□ -1.55
DEPDC4Q8N2C3 RNA5SP434-201ENST00000516647 121 ntBASIC5.36□□□□□ -1.55
DEPDC4Q8N2C3 AC091144.1-201ENST00000519573 138 ntBASIC5.36□□□□□ -1.55
DEPDC4Q8N2C3 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.36□□□□□ -1.55
DEPDC4Q8N2C3 AC007375.1-201ENST00000554513 578 ntBASIC5.36□□□□□ -1.55
DEPDC4Q8N2C3 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
DEPDC4Q8N2C3 PRPF19P1-201ENST00000584766 898 ntBASIC5.36□□□□□ -1.55
DEPDC4Q8N2C3 AC011445.2-201ENST00000599274 173 ntBASIC5.36□□□□□ -1.55
DEPDC4Q8N2C3 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.36□□□□□ -1.55
DEPDC4Q8N2C3 AC096772.1-201ENST00000609146 564 ntBASIC5.36□□□□□ -1.55
DEPDC4Q8N2C3 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.36□□□□□ -1.55
DEPDC4Q8N2C3 MIR6715B-201ENST00000637172 77 ntBASIC5.36□□□□□ -1.55
DEPDC4Q8N2C3 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC5.36□□□□□ -1.55
DEPDC4Q8N2C3 RBMY1HP-201ENST00000382759 1389 ntBASIC5.36□□□□□ -1.55
DEPDC4Q8N2C3 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
DEPDC4Q8N2C3 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
DEPDC4Q8N2C3 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
DEPDC4Q8N2C3 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
DEPDC4Q8N2C3 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
DEPDC4Q8N2C3 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
DEPDC4Q8N2C3 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
DEPDC4Q8N2C3 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
DEPDC4Q8N2C3 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
DEPDC4Q8N2C3 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
DEPDC4Q8N2C3 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
DEPDC4Q8N2C3 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
DEPDC4Q8N2C3 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.35□□□□□ -1.55
DEPDC4Q8N2C3 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
DEPDC4Q8N2C3 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
DEPDC4Q8N2C3 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.35□□□□□ -1.55
DEPDC4Q8N2C3 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
DEPDC4Q8N2C3 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
DEPDC4Q8N2C3 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.35□□□□□ -1.55
DEPDC4Q8N2C3 AC009643.2-201ENST00000603543 1448 ntBASIC5.35□□□□□ -1.55
DEPDC4Q8N2C3 Y_RNA.60-201ENST00000362831 98 ntBASIC5.35□□□□□ -1.55
DEPDC4Q8N2C3 RN7SKP224-201ENST00000364140 325 ntBASIC5.35□□□□□ -1.55
DEPDC4Q8N2C3 RNA5SP235-201ENST00000365411 114 ntBASIC5.35□□□□□ -1.55
DEPDC4Q8N2C3 MIR521-1-201ENST00000384902 87 ntBASIC5.35□□□□□ -1.55
DEPDC4Q8N2C3 Y_RNA.592-201ENST00000410274 109 ntBASIC5.35□□□□□ -1.55
DEPDC4Q8N2C3 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC5.35□□□□□ -1.55
DEPDC4Q8N2C3 Z85995.1-201ENST00000415547 335 ntBASIC5.35□□□□□ -1.55
DEPDC4Q8N2C3 AC091390.3-201ENST00000426478 338 ntBASIC5.35□□□□□ -1.55
DEPDC4Q8N2C3 HMGN2P27-201ENST00000427352 270 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms