Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 OR4P1P-201ENST00000530808 1136 ntBASIC3.95□□□□□ -1.78
VPS52Q8N1B4 AC007458.1-201ENST00000542812 373 ntBASIC3.95□□□□□ -1.78
VPS52Q8N1B4 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.95□□□□□ -1.78
VPS52Q8N1B4 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.95□□□□□ -1.78
VPS52Q8N1B4 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.95□□□□□ -1.78
VPS52Q8N1B4 EIF1P4-201ENST00000572664 335 ntBASIC3.95□□□□□ -1.78
VPS52Q8N1B4 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.95□□□□□ -1.78
VPS52Q8N1B4 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC3.95□□□□□ -1.78
VPS52Q8N1B4 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.95□□□□□ -1.78
VPS52Q8N1B4 AC068790.6-201ENST00000602558 258 ntBASIC3.95□□□□□ -1.78
VPS52Q8N1B4 AL359999.1-201ENST00000604513 294 ntBASIC3.95□□□□□ -1.78
VPS52Q8N1B4 AP001506.1-201ENST00000615444 211 ntBASIC3.95□□□□□ -1.78
VPS52Q8N1B4 AC002550.2-201ENST00000621246 394 ntBASIC3.95□□□□□ -1.78
VPS52Q8N1B4 AC091905.1-201ENST00000624400 311 ntBASIC3.95□□□□□ -1.78
VPS52Q8N1B4 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.95□□□□□ -1.78
VPS52Q8N1B4 U6.98-201ENST00000637157 84 ntBASIC3.95□□□□□ -1.78
VPS52Q8N1B4 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
VPS52Q8N1B4 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
VPS52Q8N1B4 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
VPS52Q8N1B4 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
VPS52Q8N1B4 AC009902.3-201ENST00000606235 2172 ntBASIC3.95□□□□□ -1.78
VPS52Q8N1B4 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
VPS52Q8N1B4 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.94□□□□□ -1.78
VPS52Q8N1B4 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
VPS52Q8N1B4 AC007823.1-201ENST00000569932 1566 ntBASIC3.94□□□□□ -1.78
VPS52Q8N1B4 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
VPS52Q8N1B4 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
VPS52Q8N1B4 RNA5SP50-201ENST00000363731 107 ntBASIC3.94□□□□□ -1.78
VPS52Q8N1B4 U3.20-201ENST00000390909 217 ntBASIC3.94□□□□□ -1.78
VPS52Q8N1B4 RNU6-837P-201ENST00000391056 108 ntBASIC3.94□□□□□ -1.78
VPS52Q8N1B4 RNU2-66P-201ENST00000410650 161 ntBASIC3.94□□□□□ -1.78
VPS52Q8N1B4 AC078974.1-201ENST00000411597 223 ntBASIC3.94□□□□□ -1.78
VPS52Q8N1B4 RPS3AP3-201ENST00000411933 242 ntBASIC3.94□□□□□ -1.78
VPS52Q8N1B4 AL031779.1-201ENST00000415663 330 ntBASIC3.94□□□□□ -1.78
VPS52Q8N1B4 AC007390.1-201ENST00000415722 356 ntBASIC3.94□□□□□ -1.78
VPS52Q8N1B4 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.94□□□□□ -1.78
VPS52Q8N1B4 AL353777.1-201ENST00000425552 326 ntBASIC3.94□□□□□ -1.78
VPS52Q8N1B4 AC010975.2-201ENST00000427781 588 ntBASIC3.94□□□□□ -1.78
VPS52Q8N1B4 CYCSP4-201ENST00000429682 331 ntBASIC3.94□□□□□ -1.78
VPS52Q8N1B4 AC097713.2-201ENST00000430199 356 ntBASIC3.94□□□□□ -1.78
VPS52Q8N1B4 MTND6P13-201ENST00000443510 523 ntBASIC3.94□□□□□ -1.78
VPS52Q8N1B4 AC244505.5-201ENST00000443639 207 ntBASIC3.94□□□□□ -1.78
VPS52Q8N1B4 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.94□□□□□ -1.78
VPS52Q8N1B4 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.94□□□□□ -1.78
VPS52Q8N1B4 AC084198.1-201ENST00000477747 402 ntBASIC3.94□□□□□ -1.78
VPS52Q8N1B4 TRBV12-2-201ENST00000489763 344 ntBASIC3.94□□□□□ -1.78
VPS52Q8N1B4 AC096751.1-202ENST00000502691 1067 ntBASIC3.94□□□□□ -1.78
VPS52Q8N1B4 HSPD1P15-201ENST00000505573 1122 ntBASIC3.94□□□□□ -1.78
VPS52Q8N1B4 SUMO2P20-201ENST00000520803 283 ntBASIC3.94□□□□□ -1.78
VPS52Q8N1B4 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.94□□□□□ -1.78
VPS52Q8N1B4 AP003122.4-201ENST00000530980 758 ntBASIC3.94□□□□□ -1.78
VPS52Q8N1B4 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.94□□□□□ -1.78
VPS52Q8N1B4 SETP2-201ENST00000553886 926 ntBASIC3.94□□□□□ -1.78
VPS52Q8N1B4 RPL21P5-201ENST00000554662 472 ntBASIC3.94□□□□□ -1.78
VPS52Q8N1B4 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC3.94□□□□□ -1.78
VPS52Q8N1B4 AC034268.2-201ENST00000571784 482 ntBASIC3.94□□□□□ -1.78
VPS52Q8N1B4 MIR3186-201ENST00000577404 85 ntBASIC3.94□□□□□ -1.78
VPS52Q8N1B4 MTND1P15-201ENST00000579262 949 ntBASIC3.94□□□□□ -1.78
VPS52Q8N1B4 AC055876.5-201ENST00000605667 259 ntBASIC3.94□□□□□ -1.78
VPS52Q8N1B4 BRDTP1-201ENST00000605735 677 ntBASIC3.94□□□□□ -1.78
VPS52Q8N1B4 AC006023.2-201ENST00000609916 167 ntBASIC3.94□□□□□ -1.78
VPS52Q8N1B4 XIST_intron.1-201ENST00000619444 68 ntBASIC3.94□□□□□ -1.78
VPS52Q8N1B4 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.94□□□□□ -1.78
VPS52Q8N1B4 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.94□□□□□ -1.78
VPS52Q8N1B4 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
VPS52Q8N1B4 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
VPS52Q8N1B4 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.94□□□□□ -1.78
VPS52Q8N1B4 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
VPS52Q8N1B4 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.93□□□□□ -1.78
VPS52Q8N1B4 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
VPS52Q8N1B4 AC244517.1-201ENST00000606030 2086 ntBASIC3.93□□□□□ -1.78
VPS52Q8N1B4 MTND4P5-201ENST00000435821 1374 ntBASIC3.93□□□□□ -1.78
VPS52Q8N1B4 AC092125.1-201ENST00000562568 1995 ntBASIC3.93□□□□□ -1.78
VPS52Q8N1B4 SNORA7.2-201ENST00000364446 145 ntBASIC3.93□□□□□ -1.78
VPS52Q8N1B4 SNORA51.2-201ENST00000364595 132 ntBASIC3.93□□□□□ -1.78
VPS52Q8N1B4 RNA5SP267-201ENST00000364893 126 ntBASIC3.93□□□□□ -1.78
VPS52Q8N1B4 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.93□□□□□ -1.78
VPS52Q8N1B4 RNA5SP424-201ENST00000390988 115 ntBASIC3.93□□□□□ -1.78
VPS52Q8N1B4 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
VPS52Q8N1B4 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.93□□□□□ -1.78
VPS52Q8N1B4 AC092447.6-201ENST00000414578 210 ntBASIC3.93□□□□□ -1.78
VPS52Q8N1B4 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.93□□□□□ -1.78
VPS52Q8N1B4 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.93□□□□□ -1.78
VPS52Q8N1B4 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.93□□□□□ -1.78
VPS52Q8N1B4 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.93□□□□□ -1.78
VPS52Q8N1B4 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
VPS52Q8N1B4 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.93□□□□□ -1.78
VPS52Q8N1B4 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.93□□□□□ -1.78
VPS52Q8N1B4 ST13P14-201ENST00000474095 734 ntBASIC3.93□□□□□ -1.78
VPS52Q8N1B4 AC017037.2-201ENST00000513850 890 ntBASIC3.93□□□□□ -1.78
VPS52Q8N1B4 AC090616.5-202ENST00000582111 297 ntBASIC3.93□□□□□ -1.78
VPS52Q8N1B4 AC091805.2-201ENST00000603848 235 ntBASIC3.93□□□□□ -1.78
VPS52Q8N1B4 AL137849.1-201ENST00000604767 169 ntBASIC3.93□□□□□ -1.78
VPS52Q8N1B4 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.93□□□□□ -1.78
VPS52Q8N1B4 AC006566.1-201ENST00000608943 513 ntBASIC3.93□□□□□ -1.78
VPS52Q8N1B4 AC009159.1-201ENST00000618386 642 ntBASIC3.93□□□□□ -1.78
VPS52Q8N1B4 U7.8-201ENST00000619968 63 ntBASIC3.93□□□□□ -1.78
VPS52Q8N1B4 AC012150.2-201ENST00000621300 544 ntBASIC3.93□□□□□ -1.78
VPS52Q8N1B4 AL356585.4-201ENST00000623078 1229 ntBASIC3.93□□□□□ -1.78
VPS52Q8N1B4 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms