Protein–RNA interactions for Protein: Q7RTU4

BHLHA9, Class A basic helix-loop-helix protein 9, humanhuman

Predictions only

Length 235 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHA9Q7RTU4 MIR4680-201ENST00000580906 66 ntBASIC3.87□□□□□ -1.79
BHLHA9Q7RTU4 AC073539.2-201ENST00000597113 165 ntBASIC3.87□□□□□ -1.79
BHLHA9Q7RTU4 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.87□□□□□ -1.79
BHLHA9Q7RTU4 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.87□□□□□ -1.79
BHLHA9Q7RTU4 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.87□□□□□ -1.79
BHLHA9Q7RTU4 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.87□□□□□ -1.79
BHLHA9Q7RTU4 AC131238.1-201ENST00000617135 328 ntBASIC3.87□□□□□ -1.79
BHLHA9Q7RTU4 uc_338.22-201ENST00000622722 187 ntBASIC3.87□□□□□ -1.79
BHLHA9Q7RTU4 AC034229.5-201ENST00000624258 185 ntBASIC3.87□□□□□ -1.79
BHLHA9Q7RTU4 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.87□□□□□ -1.79
BHLHA9Q7RTU4 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
BHLHA9Q7RTU4 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.87□□□□□ -1.79
BHLHA9Q7RTU4 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
BHLHA9Q7RTU4 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC3.87□□□□□ -1.79
BHLHA9Q7RTU4 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.87□□□□□ -1.79
BHLHA9Q7RTU4 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
BHLHA9Q7RTU4 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
BHLHA9Q7RTU4 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.87□□□□□ -1.79
BHLHA9Q7RTU4 AC100871.1-201ENST00000507871 1456 ntBASIC3.86□□□□□ -1.79
BHLHA9Q7RTU4 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC3.86□□□□□ -1.79
BHLHA9Q7RTU4 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
BHLHA9Q7RTU4 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
BHLHA9Q7RTU4 RNU6-501P-201ENST00000364072 100 ntBASIC3.86□□□□□ -1.79
BHLHA9Q7RTU4 SNORA4.1-201ENST00000364263 144 ntBASIC3.86□□□□□ -1.79
BHLHA9Q7RTU4 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
BHLHA9Q7RTU4 RNU6-1103P-201ENST00000384150 107 ntBASIC3.86□□□□□ -1.79
BHLHA9Q7RTU4 AL121834.1-202ENST00000404494 277 ntBASIC3.86□□□□□ -1.79
BHLHA9Q7RTU4 RNU6-985P-201ENST00000410182 104 ntBASIC3.86□□□□□ -1.79
BHLHA9Q7RTU4 RNU2-8P-201ENST00000410727 190 ntBASIC3.86□□□□□ -1.79
BHLHA9Q7RTU4 RPS12P24-201ENST00000412619 387 ntBASIC3.86□□□□□ -1.79
BHLHA9Q7RTU4 RPL7P10-201ENST00000417407 739 ntBASIC3.86□□□□□ -1.79
BHLHA9Q7RTU4 AL035423.1-201ENST00000420331 213 ntBASIC3.86□□□□□ -1.79
BHLHA9Q7RTU4 RPL21P109-201ENST00000422213 475 ntBASIC3.86□□□□□ -1.79
BHLHA9Q7RTU4 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.86□□□□□ -1.79
BHLHA9Q7RTU4 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.86□□□□□ -1.79
BHLHA9Q7RTU4 YWHAEP5-201ENST00000431545 765 ntBASIC3.86□□□□□ -1.79
BHLHA9Q7RTU4 AC092170.1-201ENST00000440211 356 ntBASIC3.86□□□□□ -1.79
BHLHA9Q7RTU4 Z95327.1-201ENST00000446082 482 ntBASIC3.86□□□□□ -1.79
BHLHA9Q7RTU4 AC073415.1-201ENST00000449240 153 ntBASIC3.86□□□□□ -1.79
BHLHA9Q7RTU4 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.86□□□□□ -1.79
BHLHA9Q7RTU4 AC007967.1-201ENST00000455422 1159 ntBASIC3.86□□□□□ -1.79
BHLHA9Q7RTU4 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.86□□□□□ -1.79
BHLHA9Q7RTU4 ARPC3P2-201ENST00000457786 533 ntBASIC3.86□□□□□ -1.79
BHLHA9Q7RTU4 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.86□□□□□ -1.79
BHLHA9Q7RTU4 MTND4P17-201ENST00000470444 350 ntBASIC3.86□□□□□ -1.79
BHLHA9Q7RTU4 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.86□□□□□ -1.79
BHLHA9Q7RTU4 snoZ278.1-201ENST00000517059 112 ntBASIC3.86□□□□□ -1.79
BHLHA9Q7RTU4 AF186190.1-201ENST00000517470 480 ntBASIC3.86□□□□□ -1.79
BHLHA9Q7RTU4 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.86□□□□□ -1.79
BHLHA9Q7RTU4 AC107953.1-201ENST00000522216 297 ntBASIC3.86□□□□□ -1.79
BHLHA9Q7RTU4 AC007375.1-201ENST00000554513 578 ntBASIC3.86□□□□□ -1.79
BHLHA9Q7RTU4 AC068446.3-201ENST00000555285 382 ntBASIC3.86□□□□□ -1.79
BHLHA9Q7RTU4 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.86□□□□□ -1.79
BHLHA9Q7RTU4 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.86□□□□□ -1.79
BHLHA9Q7RTU4 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.86□□□□□ -1.79
BHLHA9Q7RTU4 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.86□□□□□ -1.79
BHLHA9Q7RTU4 MIR3912-201ENST00000577566 105 ntBASIC3.86□□□□□ -1.79
BHLHA9Q7RTU4 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.86□□□□□ -1.79
BHLHA9Q7RTU4 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.86□□□□□ -1.79
BHLHA9Q7RTU4 STMN1P1-201ENST00000617809 440 ntBASIC3.86□□□□□ -1.79
BHLHA9Q7RTU4 MIR4727-201ENST00000622232 55 ntBASIC3.86□□□□□ -1.79
BHLHA9Q7RTU4 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
BHLHA9Q7RTU4 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.86□□□□□ -1.79
BHLHA9Q7RTU4 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
BHLHA9Q7RTU4 DCAF13P3-201ENST00000561147 1334 ntBASIC3.86□□□□□ -1.79
BHLHA9Q7RTU4 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.86□□□□□ -1.79
BHLHA9Q7RTU4 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.85□□□□□ -1.79
BHLHA9Q7RTU4 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
BHLHA9Q7RTU4 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.85□□□□□ -1.79
BHLHA9Q7RTU4 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
BHLHA9Q7RTU4 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
BHLHA9Q7RTU4 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
BHLHA9Q7RTU4 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
BHLHA9Q7RTU4 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
BHLHA9Q7RTU4 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
BHLHA9Q7RTU4 Y_RNA.1-201ENST00000352915 104 ntBASIC3.85□□□□□ -1.79
BHLHA9Q7RTU4 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.85□□□□□ -1.79
BHLHA9Q7RTU4 Y_RNA.28-201ENST00000362554 111 ntBASIC3.85□□□□□ -1.79
BHLHA9Q7RTU4 RNU6-433P-201ENST00000363216 104 ntBASIC3.85□□□□□ -1.79
BHLHA9Q7RTU4 RNU6-774P-201ENST00000363238 107 ntBASIC3.85□□□□□ -1.79
BHLHA9Q7RTU4 Y_RNA.148-201ENST00000363557 117 ntBASIC3.85□□□□□ -1.79
BHLHA9Q7RTU4 RNU6-1085P-201ENST00000363576 107 ntBASIC3.85□□□□□ -1.79
BHLHA9Q7RTU4 RNU6-707P-201ENST00000364647 95 ntBASIC3.85□□□□□ -1.79
BHLHA9Q7RTU4 Y_RNA.387-201ENST00000383918 102 ntBASIC3.85□□□□□ -1.79
BHLHA9Q7RTU4 Y_RNA.557-201ENST00000384680 107 ntBASIC3.85□□□□□ -1.79
BHLHA9Q7RTU4 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
BHLHA9Q7RTU4 HMGN2P8-201ENST00000391458 268 ntBASIC3.85□□□□□ -1.79
BHLHA9Q7RTU4 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
BHLHA9Q7RTU4 RN7SKP140-201ENST00000411196 284 ntBASIC3.85□□□□□ -1.79
BHLHA9Q7RTU4 RPS3AP3-201ENST00000411933 242 ntBASIC3.85□□□□□ -1.79
BHLHA9Q7RTU4 ATP5A1P2-201ENST00000412323 255 ntBASIC3.85□□□□□ -1.79
BHLHA9Q7RTU4 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
BHLHA9Q7RTU4 ARL5AP4-201ENST00000430731 512 ntBASIC3.85□□□□□ -1.79
BHLHA9Q7RTU4 GOT2P5-201ENST00000433995 546 ntBASIC3.85□□□□□ -1.79
BHLHA9Q7RTU4 AF228730.2-201ENST00000438784 848 ntBASIC3.85□□□□□ -1.79
BHLHA9Q7RTU4 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.85□□□□□ -1.79
BHLHA9Q7RTU4 AC092809.1-201ENST00000441469 474 ntBASIC3.85□□□□□ -1.79
BHLHA9Q7RTU4 AC079448.1-201ENST00000449377 373 ntBASIC3.85□□□□□ -1.79
BHLHA9Q7RTU4 PDSS1P2-201ENST00000449397 678 ntBASIC3.85□□□□□ -1.79
BHLHA9Q7RTU4 AL033528.1-201ENST00000453780 140 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms