Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.14□□□□□ -1.91
C11orf88Q6PI97 AC116337.2-201ENST00000477662 156 ntBASIC3.14□□□□□ -1.91
C11orf88Q6PI97 RPS4XP15-201ENST00000489210 795 ntBASIC3.14□□□□□ -1.91
C11orf88Q6PI97 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.14□□□□□ -1.91
C11orf88Q6PI97 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.14□□□□□ -1.91
C11orf88Q6PI97 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.14□□□□□ -1.91
C11orf88Q6PI97 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.14□□□□□ -1.91
C11orf88Q6PI97 AC118282.1-201ENST00000506408 765 ntBASIC3.14□□□□□ -1.91
C11orf88Q6PI97 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.14□□□□□ -1.91
C11orf88Q6PI97 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC3.14□□□□□ -1.91
C11orf88Q6PI97 RNA5SP208-201ENST00000516156 78 ntBASIC3.14□□□□□ -1.91
C11orf88Q6PI97 RNU2-27P-201ENST00000516185 142 ntBASIC3.14□□□□□ -1.91
C11orf88Q6PI97 RNA5SP290-201ENST00000517133 127 ntBASIC3.14□□□□□ -1.91
C11orf88Q6PI97 AC087369.1-201ENST00000520775 996 ntBASIC3.14□□□□□ -1.91
C11orf88Q6PI97 AC087373.1-201ENST00000524920 491 ntBASIC3.14□□□□□ -1.91
C11orf88Q6PI97 AC068587.4-201ENST00000533893 186 ntBASIC3.14□□□□□ -1.91
C11orf88Q6PI97 YPEL5P3-201ENST00000547227 352 ntBASIC3.14□□□□□ -1.91
C11orf88Q6PI97 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.14□□□□□ -1.91
C11orf88Q6PI97 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.14□□□□□ -1.91
C11orf88Q6PI97 AC136618.2-201ENST00000575091 400 ntBASIC3.14□□□□□ -1.91
C11orf88Q6PI97 RPL23AP78-201ENST00000599928 470 ntBASIC3.14□□□□□ -1.91
C11orf88Q6PI97 DPPA3P3-201ENST00000603842 430 ntBASIC3.14□□□□□ -1.91
C11orf88Q6PI97 AL161729.4-201ENST00000604650 476 ntBASIC3.14□□□□□ -1.91
C11orf88Q6PI97 AL136363.1-201ENST00000605349 337 ntBASIC3.14□□□□□ -1.91
C11orf88Q6PI97 AC091965.4-201ENST00000607691 587 ntBASIC3.14□□□□□ -1.91
C11orf88Q6PI97 AC131902.3-201ENST00000611767 581 ntBASIC3.14□□□□□ -1.91
C11orf88Q6PI97 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.14□□□□□ -1.91
C11orf88Q6PI97 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.14□□□□□ -1.91
C11orf88Q6PI97 MTND1P37-201ENST00000636562 264 ntBASIC3.14□□□□□ -1.91
C11orf88Q6PI97 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
C11orf88Q6PI97 Z83843.1-201ENST00000604070 3685 ntBASIC3.14□□□□□ -1.91
C11orf88Q6PI97 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
C11orf88Q6PI97 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.14□□□□□ -1.91
C11orf88Q6PI97 AL513302.2-201ENST00000562313 1842 ntBASIC3.14□□□□□ -1.91
C11orf88Q6PI97 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
C11orf88Q6PI97 RNU6-1200P-201ENST00000384162 107 ntBASIC3.13□□□□□ -1.91
C11orf88Q6PI97 MIR19A-201ENST00000384878 82 ntBASIC3.13□□□□□ -1.91
C11orf88Q6PI97 MIR7-3-201ENST00000384898 110 ntBASIC3.13□□□□□ -1.91
C11orf88Q6PI97 RN7SKP156-201ENST00000410308 342 ntBASIC3.13□□□□□ -1.91
C11orf88Q6PI97 RNU2-33P-201ENST00000410344 192 ntBASIC3.13□□□□□ -1.91
C11orf88Q6PI97 AL389915.1-201ENST00000422463 466 ntBASIC3.13□□□□□ -1.91
C11orf88Q6PI97 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.13□□□□□ -1.91
C11orf88Q6PI97 AC109583.1-201ENST00000432156 268 ntBASIC3.13□□□□□ -1.91
C11orf88Q6PI97 USP12PX-201ENST00000432383 1057 ntBASIC3.13□□□□□ -1.91
C11orf88Q6PI97 HMGB3P11-201ENST00000440127 604 ntBASIC3.13□□□□□ -1.91
C11orf88Q6PI97 NOTCH2P1-201ENST00000443481 624 ntBASIC3.13□□□□□ -1.91
C11orf88Q6PI97 RPL7P36-201ENST00000444633 681 ntBASIC3.13□□□□□ -1.91
C11orf88Q6PI97 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.13□□□□□ -1.91
C11orf88Q6PI97 AL590639.1-201ENST00000456484 337 ntBASIC3.13□□□□□ -1.91
C11orf88Q6PI97 RNU7-59P-201ENST00000459101 61 ntBASIC3.13□□□□□ -1.91
C11orf88Q6PI97 AC010401.1-201ENST00000463867 348 ntBASIC3.13□□□□□ -1.91
C11orf88Q6PI97 RPS20P22-201ENST00000473700 357 ntBASIC3.13□□□□□ -1.91
C11orf88Q6PI97 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
C11orf88Q6PI97 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.13□□□□□ -1.91
C11orf88Q6PI97 MTND5P13-201ENST00000513046 1079 ntBASIC3.13□□□□□ -1.91
C11orf88Q6PI97 AC110760.3-202ENST00000515177 371 ntBASIC3.13□□□□□ -1.91
C11orf88Q6PI97 NDUFA5P2-201ENST00000519723 344 ntBASIC3.13□□□□□ -1.91
C11orf88Q6PI97 MTATP6P15-201ENST00000527233 835 ntBASIC3.13□□□□□ -1.91
C11orf88Q6PI97 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC3.13□□□□□ -1.91
C11orf88Q6PI97 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.13□□□□□ -1.91
C11orf88Q6PI97 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.13□□□□□ -1.91
C11orf88Q6PI97 AC007115.1-201ENST00000546853 234 ntBASIC3.13□□□□□ -1.91
C11orf88Q6PI97 MIR4444-1-201ENST00000581696 74 ntBASIC3.13□□□□□ -1.91
C11orf88Q6PI97 MIR4444-2-201ENST00000584390 74 ntBASIC3.13□□□□□ -1.91
C11orf88Q6PI97 HMGN2P15-201ENST00000585707 270 ntBASIC3.13□□□□□ -1.91
C11orf88Q6PI97 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
C11orf88Q6PI97 AC103710.1-201ENST00000610003 901 ntBASIC3.13□□□□□ -1.91
C11orf88Q6PI97 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
C11orf88Q6PI97 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.13□□□□□ -1.91
C11orf88Q6PI97 AC110801.1-201ENST00000623590 212 ntBASIC3.13□□□□□ -1.91
C11orf88Q6PI97 AL136313.1-201ENST00000624804 202 ntBASIC3.13□□□□□ -1.91
C11orf88Q6PI97 AC097655.1-201ENST00000635075 318 ntBASIC3.13□□□□□ -1.91
C11orf88Q6PI97 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
C11orf88Q6PI97 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.13□□□□□ -1.91
C11orf88Q6PI97 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.13□□□□□ -1.91
C11orf88Q6PI97 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
C11orf88Q6PI97 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
C11orf88Q6PI97 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
C11orf88Q6PI97 AL049781.1-201ENST00000623195 3585 ntBASIC3.12□□□□□ -1.91
C11orf88Q6PI97 RNU1-75P-201ENST00000347264 129 ntBASIC3.12□□□□□ -1.91
C11orf88Q6PI97 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.12□□□□□ -1.91
C11orf88Q6PI97 AC007066.1-201ENST00000392902 381 ntBASIC3.12□□□□□ -1.91
C11orf88Q6PI97 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
C11orf88Q6PI97 MIR887-201ENST00000401258 79 ntBASIC3.12□□□□□ -1.91
C11orf88Q6PI97 RNU6-193P-201ENST00000410977 107 ntBASIC3.12□□□□□ -1.91
C11orf88Q6PI97 RNA5SP107-201ENST00000411358 122 ntBASIC3.12□□□□□ -1.91
C11orf88Q6PI97 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.12□□□□□ -1.91
C11orf88Q6PI97 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.12□□□□□ -1.91
C11orf88Q6PI97 SETD6P1-201ENST00000444575 317 ntBASIC3.12□□□□□ -1.91
C11orf88Q6PI97 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.12□□□□□ -1.91
C11orf88Q6PI97 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.12□□□□□ -1.91
C11orf88Q6PI97 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.12□□□□□ -1.91
C11orf88Q6PI97 RNU7-23P-201ENST00000459465 62 ntBASIC3.12□□□□□ -1.91
C11orf88Q6PI97 AC072039.1-201ENST00000477611 581 ntBASIC3.12□□□□□ -1.91
C11orf88Q6PI97 RN7SL323P-201ENST00000494712 295 ntBASIC3.12□□□□□ -1.91
C11orf88Q6PI97 SUMO2P6-201ENST00000505273 288 ntBASIC3.12□□□□□ -1.91
C11orf88Q6PI97 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
C11orf88Q6PI97 HMGN1P11-201ENST00000508668 303 ntBASIC3.12□□□□□ -1.91
C11orf88Q6PI97 AC110768.1-201ENST00000509222 400 ntBASIC3.12□□□□□ -1.91
C11orf88Q6PI97 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms