Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.69□□□□□ -1.98
RAB40BQ12829 DUXAP1-201ENST00000556632 463 ntBASIC2.69□□□□□ -1.98
RAB40BQ12829 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC2.69□□□□□ -1.98
RAB40BQ12829 AC087465.1-201ENST00000560574 245 ntBASIC2.69□□□□□ -1.98
RAB40BQ12829 AC005951.1-201ENST00000576706 485 ntBASIC2.69□□□□□ -1.98
RAB40BQ12829 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.69□□□□□ -1.98
RAB40BQ12829 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC2.69□□□□□ -1.98
RAB40BQ12829 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.69□□□□□ -1.98
RAB40BQ12829 AL133393.1-201ENST00000603277 287 ntBASIC2.69□□□□□ -1.98
RAB40BQ12829 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.69□□□□□ -1.98
RAB40BQ12829 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC2.69□□□□□ -1.98
RAB40BQ12829 AC092106.3-201ENST00000611308 722 ntBASIC2.69□□□□□ -1.98
RAB40BQ12829 AL020991.1-201ENST00000612314 373 ntBASIC2.69□□□□□ -1.98
RAB40BQ12829 AC090132.2-201ENST00000615881 347 ntBASIC2.69□□□□□ -1.98
RAB40BQ12829 AL603758.1-201ENST00000618654 241 ntBASIC2.69□□□□□ -1.98
RAB40BQ12829 AC009268.2-201ENST00000621925 457 ntBASIC2.69□□□□□ -1.98
RAB40BQ12829 AC099506.2-201ENST00000623074 221 ntBASIC2.69□□□□□ -1.98
RAB40BQ12829 TEX41-300ENST00000631048 69 ntTSL 5 BASIC2.69□□□□□ -1.98
RAB40BQ12829 MIR4275-201ENST00000636486 87 ntBASIC2.69□□□□□ -1.98
RAB40BQ12829 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
RAB40BQ12829 MAPK10-322ENST00000641485 4530 ntBASIC2.69□□□□□ -1.98
RAB40BQ12829 TPTE2P4-201ENST00000258589 1605 ntBASIC2.68□□□□□ -1.98
RAB40BQ12829 SDAD1P2-201ENST00000441308 2028 ntBASIC2.68□□□□□ -1.98
RAB40BQ12829 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
RAB40BQ12829 SNORA71.3-201ENST00000362582 128 ntBASIC2.68□□□□□ -1.98
RAB40BQ12829 SNORA36C-201ENST00000384289 132 ntBASIC2.68□□□□□ -1.98
RAB40BQ12829 MIR514A1-201ENST00000385133 98 ntBASIC2.68□□□□□ -1.98
RAB40BQ12829 RNA5SP171-201ENST00000391071 115 ntBASIC2.68□□□□□ -1.98
RAB40BQ12829 SAR1AP2-201ENST00000392696 594 ntBASIC2.68□□□□□ -1.98
RAB40BQ12829 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.68□□□□□ -1.98
RAB40BQ12829 AC018630.2-202ENST00000422992 927 ntBASIC2.68□□□□□ -1.98
RAB40BQ12829 NDUFB4P7-201ENST00000423198 363 ntBASIC2.68□□□□□ -1.98
RAB40BQ12829 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC2.68□□□□□ -1.98
RAB40BQ12829 AC008850.1-201ENST00000427546 362 ntBASIC2.68□□□□□ -1.98
RAB40BQ12829 YME1L1P1-201ENST00000429435 297 ntBASIC2.68□□□□□ -1.98
RAB40BQ12829 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.68□□□□□ -1.98
RAB40BQ12829 UBE2V1P13-201ENST00000436983 439 ntBASIC2.68□□□□□ -1.98
RAB40BQ12829 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
RAB40BQ12829 AC016696.1-201ENST00000446949 318 ntBASIC2.68□□□□□ -1.98
RAB40BQ12829 SNRPGP6-201ENST00000451124 220 ntBASIC2.68□□□□□ -1.98
RAB40BQ12829 AC091179.1-201ENST00000461606 579 ntBASIC2.68□□□□□ -1.98
RAB40BQ12829 AC104472.2-201ENST00000469035 601 ntBASIC2.68□□□□□ -1.98
RAB40BQ12829 RPS29P2-201ENST00000479278 136 ntBASIC2.68□□□□□ -1.98
RAB40BQ12829 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC2.68□□□□□ -1.98
RAB40BQ12829 AC020699.1-201ENST00000505161 445 ntBASIC2.68□□□□□ -1.98
RAB40BQ12829 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.68□□□□□ -1.98
RAB40BQ12829 AC111000.2-201ENST00000507775 550 ntBASIC2.68□□□□□ -1.98
RAB40BQ12829 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
RAB40BQ12829 RNU6-415P-201ENST00000516252 97 ntBASIC2.68□□□□□ -1.98
RAB40BQ12829 AP000867.2-201ENST00000532468 320 ntBASIC2.68□□□□□ -1.98
RAB40BQ12829 AC007536.1-201ENST00000533382 349 ntBASIC2.68□□□□□ -1.98
RAB40BQ12829 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.68□□□□□ -1.98
RAB40BQ12829 AGGF1P5-201ENST00000567900 919 ntBASIC2.68□□□□□ -1.98
RAB40BQ12829 MTCO3P13-201ENST00000577757 781 ntBASIC2.68□□□□□ -1.98
RAB40BQ12829 MIR3944-201ENST00000581277 108 ntBASIC2.68□□□□□ -1.98
RAB40BQ12829 MIR3609-201ENST00000582661 80 ntBASIC2.68□□□□□ -1.98
RAB40BQ12829 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.68□□□□□ -1.98
RAB40BQ12829 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC2.68□□□□□ -1.98
RAB40BQ12829 AC023043.3-201ENST00000593113 385 ntBASIC2.68□□□□□ -1.98
RAB40BQ12829 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.68□□□□□ -1.98
RAB40BQ12829 RNU6-88P-201ENST00000606801 100 ntBASIC2.68□□□□□ -1.98
RAB40BQ12829 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.68□□□□□ -1.98
RAB40BQ12829 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.68□□□□□ -1.98
RAB40BQ12829 AC084757.4-201ENST00000616350 526 ntBASIC2.68□□□□□ -1.98
RAB40BQ12829 AC007318.2-201ENST00000620999 243 ntBASIC2.68□□□□□ -1.98
RAB40BQ12829 AC068787.1-201ENST00000623908 691 ntBASIC2.68□□□□□ -1.98
RAB40BQ12829 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.68□□□□□ -1.98
RAB40BQ12829 MTND5P7-201ENST00000413558 1798 ntBASIC2.68□□□□□ -1.98
RAB40BQ12829 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
RAB40BQ12829 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
RAB40BQ12829 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
RAB40BQ12829 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
RAB40BQ12829 MTCO1P12-201ENST00000414273 1543 ntBASIC2.68□□□□□ -1.98
RAB40BQ12829 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.67□□□□□ -1.98
RAB40BQ12829 GABRG2-229ENST00000641017 3628 ntBASIC2.67□□□□□ -1.98
RAB40BQ12829 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
RAB40BQ12829 RPL9P7-201ENST00000330965 580 ntBASIC2.67□□□□□ -1.98
RAB40BQ12829 RNA5SP72-201ENST00000364442 117 ntBASIC2.67□□□□□ -1.98
RAB40BQ12829 SNORD67-201ENST00000390833 111 ntBASIC2.67□□□□□ -1.98
RAB40BQ12829 U3.20-201ENST00000390909 217 ntBASIC2.67□□□□□ -1.98
RAB40BQ12829 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
RAB40BQ12829 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
RAB40BQ12829 RNU6-516P-201ENST00000411381 104 ntBASIC2.67□□□□□ -1.98
RAB40BQ12829 MTCO1P17-201ENST00000411522 491 ntBASIC2.67□□□□□ -1.98
RAB40BQ12829 PIGPP2-201ENST00000411569 458 ntBASIC2.67□□□□□ -1.98
RAB40BQ12829 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.67□□□□□ -1.98
RAB40BQ12829 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.67□□□□□ -1.98
RAB40BQ12829 AC234781.2-201ENST00000426370 994 ntBASIC2.67□□□□□ -1.98
RAB40BQ12829 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
RAB40BQ12829 TAAR7P-201ENST00000436141 242 ntBASIC2.67□□□□□ -1.98
RAB40BQ12829 AC091862.1-201ENST00000438016 1100 ntBASIC2.67□□□□□ -1.98
RAB40BQ12829 LSM1P1-201ENST00000438629 273 ntBASIC2.67□□□□□ -1.98
RAB40BQ12829 AC009237.8-201ENST00000445492 379 ntBASIC2.67□□□□□ -1.98
RAB40BQ12829 AP000542.1-201ENST00000448473 371 ntBASIC2.67□□□□□ -1.98
RAB40BQ12829 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.67□□□□□ -1.98
RAB40BQ12829 AC034236.1-201ENST00000469891 373 ntBASIC2.67□□□□□ -1.98
RAB40BQ12829 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC2.67□□□□□ -1.98
RAB40BQ12829 AC109925.1-201ENST00000478069 331 ntBASIC2.67□□□□□ -1.98
RAB40BQ12829 AC093809.1-201ENST00000509155 340 ntBASIC2.67□□□□□ -1.98
RAB40BQ12829 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms