Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 AL136520.1-201ENST00000600311 1322 ntBASIC1.35□□□□□ -2.19
TFF3Q07654 AC027514.1-201ENST00000588561 1603 ntBASIC1.34□□□□□ -2.19
TFF3Q07654 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
TFF3Q07654 RNU6-707P-201ENST00000364647 95 ntBASIC1.34□□□□□ -2.19
TFF3Q07654 RNU6-1180P-201ENST00000364935 107 ntBASIC1.34□□□□□ -2.19
TFF3Q07654 MIR489-201ENST00000384923 84 ntBASIC1.34□□□□□ -2.19
TFF3Q07654 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.34□□□□□ -2.19
TFF3Q07654 AL355497.1-201ENST00000406262 551 ntBASIC1.34□□□□□ -2.19
TFF3Q07654 RPS3AP9-201ENST00000417027 792 ntBASIC1.34□□□□□ -2.19
TFF3Q07654 PAICSP7-201ENST00000419829 962 ntBASIC1.34□□□□□ -2.19
TFF3Q07654 IFNA20P-201ENST00000436840 528 ntBASIC1.34□□□□□ -2.19
TFF3Q07654 AC234775.1-201ENST00000454247 670 ntBASIC1.34□□□□□ -2.19
TFF3Q07654 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.34□□□□□ -2.19
TFF3Q07654 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.34□□□□□ -2.19
TFF3Q07654 TOMM22P6-201ENST00000465035 409 ntBASIC1.34□□□□□ -2.19
TFF3Q07654 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC1.34□□□□□ -2.19
TFF3Q07654 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC1.34□□□□□ -2.19
TFF3Q07654 RPL23AP55-201ENST00000498163 452 ntBASIC1.34□□□□□ -2.19
TFF3Q07654 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.34□□□□□ -2.19
TFF3Q07654 AC009901.1-201ENST00000506703 541 ntBASIC1.34□□□□□ -2.19
TFF3Q07654 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC1.34□□□□□ -2.19
TFF3Q07654 SNORA31.23-201ENST00000517219 133 ntBASIC1.34□□□□□ -2.19
TFF3Q07654 SNORA31.24-201ENST00000517232 57 ntBASIC1.34□□□□□ -2.19
TFF3Q07654 RNU6-711P-201ENST00000517255 106 ntBASIC1.34□□□□□ -2.19
TFF3Q07654 PTP4A1P6-201ENST00000531034 478 ntBASIC1.34□□□□□ -2.19
TFF3Q07654 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC1.34□□□□□ -2.19
TFF3Q07654 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC1.34□□□□□ -2.19
TFF3Q07654 MIR6504-201ENST00000613520 61 ntBASIC1.34□□□□□ -2.19
TFF3Q07654 AK6-205ENST00000618980 483 ntTSL 2 BASIC1.34□□□□□ -2.19
TFF3Q07654 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC1.34□□□□□ -2.19
TFF3Q07654 ZNF209P-201ENST00000593450 2304 ntBASIC1.34□□□□□ -2.2
TFF3Q07654 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.2
TFF3Q07654 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.2
TFF3Q07654 AC233981.2-201ENST00000611524 1614 ntBASIC1.33□□□□□ -2.2
TFF3Q07654 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
TFF3Q07654 RNU6-234P-201ENST00000365229 104 ntBASIC1.33□□□□□ -2.2
TFF3Q07654 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC1.33□□□□□ -2.2
TFF3Q07654 VN1R31P-201ENST00000417498 730 ntBASIC1.33□□□□□ -2.2
TFF3Q07654 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.33□□□□□ -2.2
TFF3Q07654 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.33□□□□□ -2.2
TFF3Q07654 AC009237.2-201ENST00000421358 284 ntBASIC1.33□□□□□ -2.2
TFF3Q07654 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC1.33□□□□□ -2.2
TFF3Q07654 AC124916.1-201ENST00000444020 547 ntBASIC1.33□□□□□ -2.2
TFF3Q07654 AC245517.4-201ENST00000448601 281 ntBASIC1.33□□□□□ -2.2
TFF3Q07654 ATG12P2-201ENST00000456830 416 ntBASIC1.33□□□□□ -2.2
TFF3Q07654 SNORD121B-201ENST00000458838 81 ntBASIC1.33□□□□□ -2.2
TFF3Q07654 RPL7P18-201ENST00000478965 734 ntBASIC1.33□□□□□ -2.2
TFF3Q07654 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
TFF3Q07654 IGHVIII-38-1-201ENST00000521454 282 ntBASIC1.33□□□□□ -2.2
TFF3Q07654 AC083923.1-201ENST00000523708 376 ntBASIC1.33□□□□□ -2.2
TFF3Q07654 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
TFF3Q07654 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.33□□□□□ -2.2
TFF3Q07654 AL161734.1-201ENST00000609720 557 ntBASIC1.33□□□□□ -2.2
TFF3Q07654 AC068944.2-201ENST00000610373 403 ntBASIC1.33□□□□□ -2.2
TFF3Q07654 AC098679.5-201ENST00000624394 571 ntBASIC1.33□□□□□ -2.2
TFF3Q07654 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
TFF3Q07654 RNU6-461P-201ENST00000364195 107 ntBASIC1.32□□□□□ -2.2
TFF3Q07654 Y_RNA.224-201ENST00000364308 111 ntBASIC1.32□□□□□ -2.2
TFF3Q07654 RPS20P15-201ENST00000412792 311 ntBASIC1.32□□□□□ -2.2
TFF3Q07654 AL356379.1-201ENST00000414105 126 ntBASIC1.32□□□□□ -2.2
TFF3Q07654 NDUFA5P4-201ENST00000436704 385 ntBASIC1.32□□□□□ -2.2
TFF3Q07654 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC1.32□□□□□ -2.2
TFF3Q07654 MOB1AP2-201ENST00000446060 614 ntBASIC1.32□□□□□ -2.2
TFF3Q07654 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
TFF3Q07654 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.32□□□□□ -2.2
TFF3Q07654 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
TFF3Q07654 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.32□□□□□ -2.2
TFF3Q07654 AF279873.1-201ENST00000523393 313 ntBASIC1.32□□□□□ -2.2
TFF3Q07654 AP002748.2-201ENST00000528671 348 ntBASIC1.32□□□□□ -2.2
TFF3Q07654 MIR3690-201ENST00000580266 75 ntBASIC1.32□□□□□ -2.2
TFF3Q07654 RPS15AP11-201ENST00000594193 385 ntBASIC1.32□□□□□ -2.2
TFF3Q07654 WISP1-OT1-201ENST00000602893 642 ntBASIC1.32□□□□□ -2.2
TFF3Q07654 RNA5SP108-201ENST00000605921 117 ntBASIC1.32□□□□□ -2.2
TFF3Q07654 AL390240.1-201ENST00000612950 384 ntBASIC1.32□□□□□ -2.2
TFF3Q07654 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.32□□□□□ -2.2
TFF3Q07654 AL390862.1-201ENST00000635467 1469 ntBASIC1.31□□□□□ -2.2
TFF3Q07654 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
TFF3Q07654 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
TFF3Q07654 Y_RNA.122-201ENST00000363331 96 ntBASIC1.31□□□□□ -2.2
TFF3Q07654 RPL7P27-201ENST00000403775 720 ntBASIC1.31□□□□□ -2.2
TFF3Q07654 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC1.31□□□□□ -2.2
TFF3Q07654 PGBD4P6-201ENST00000421501 610 ntBASIC1.31□□□□□ -2.2
TFF3Q07654 OR10R1P-201ENST00000441524 1141 ntBASIC1.31□□□□□ -2.2
TFF3Q07654 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.31□□□□□ -2.2
TFF3Q07654 Z99714.1-201ENST00000450463 807 ntBASIC1.31□□□□□ -2.2
TFF3Q07654 RNU1-123P-201ENST00000458950 160 ntBASIC1.31□□□□□ -2.2
TFF3Q07654 AC114322.1-201ENST00000506771 926 ntBASIC1.31□□□□□ -2.2
TFF3Q07654 RN7SKP34-201ENST00000516142 244 ntBASIC1.31□□□□□ -2.2
TFF3Q07654 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.31□□□□□ -2.2
TFF3Q07654 AC139103.1-201ENST00000534696 1030 ntBASIC1.31□□□□□ -2.2
TFF3Q07654 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.31□□□□□ -2.2
TFF3Q07654 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC1.31□□□□□ -2.2
TFF3Q07654 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.31□□□□□ -2.2
TFF3Q07654 AC098848.2-201ENST00000588023 330 ntBASIC1.31□□□□□ -2.2
TFF3Q07654 AL592494.3-201ENST00000609485 464 ntBASIC1.31□□□□□ -2.2
TFF3Q07654 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.31□□□□□ -2.2
TFF3Q07654 AC103710.2-202ENST00000641454 2853 ntBASIC1.31□□□□□ -2.2
TFF3Q07654 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
TFF3Q07654 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
TFF3Q07654 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms