Protein–RNA interactions for Protein: Q01831

XPC, DNA repair protein complementing XP-C cells, humanhuman

Predicted RBP Predictions only

Length 940 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPCQ01831 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.5
XPCQ01831 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
XPCQ01831 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.65□□□□□ -1.5
XPCQ01831 OR2AS1P-201ENST00000427827 319 ntBASIC5.65□□□□□ -1.5
XPCQ01831 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
XPCQ01831 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC5.65□□□□□ -1.5
XPCQ01831 AC135721.1-201ENST00000497954 479 ntBASIC5.65□□□□□ -1.5
XPCQ01831 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC5.65□□□□□ -1.5
XPCQ01831 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC5.65□□□□□ -1.5
XPCQ01831 RNU7-51P-201ENST00000516560 62 ntBASIC5.65□□□□□ -1.5
XPCQ01831 AF186190.1-201ENST00000517470 480 ntBASIC5.65□□□□□ -1.5
XPCQ01831 HMGB1P41-201ENST00000520234 440 ntBASIC5.65□□□□□ -1.5
XPCQ01831 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC5.65□□□□□ -1.5
XPCQ01831 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC5.65□□□□□ -1.5
XPCQ01831 ARL2BPP2-201ENST00000550907 489 ntBASIC5.65□□□□□ -1.5
XPCQ01831 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC5.65□□□□□ -1.5
XPCQ01831 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC5.65□□□□□ -1.5
XPCQ01831 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC5.65□□□□□ -1.5
XPCQ01831 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC5.65□□□□□ -1.5
XPCQ01831 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC5.65□□□□□ -1.5
XPCQ01831 AC010591.1-201ENST00000603941 649 ntBASIC5.65□□□□□ -1.5
XPCQ01831 AC087045.1-201ENST00000605856 382 ntBASIC5.65□□□□□ -1.5
XPCQ01831 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC5.65□□□□□ -1.5
XPCQ01831 MIR6868-201ENST00000611215 58 ntBASIC5.65□□□□□ -1.5
XPCQ01831 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC5.65□□□□□ -1.5
XPCQ01831 AC100810.6-201ENST00000638068 285 ntBASIC5.65□□□□□ -1.5
XPCQ01831 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
XPCQ01831 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.65□□□□□ -1.51
XPCQ01831 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
XPCQ01831 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.64□□□□□ -1.51
XPCQ01831 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC5.64□□□□□ -1.51
XPCQ01831 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
XPCQ01831 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.64□□□□□ -1.51
XPCQ01831 RNU6-845P-201ENST00000362578 103 ntBASIC5.64□□□□□ -1.51
XPCQ01831 Y_RNA.142-201ENST00000363491 102 ntBASIC5.64□□□□□ -1.51
XPCQ01831 RNU6-432P-201ENST00000384196 109 ntBASIC5.64□□□□□ -1.51
XPCQ01831 MIR454-201ENST00000390180 115 ntBASIC5.64□□□□□ -1.51
XPCQ01831 RNU4-78P-201ENST00000410940 126 ntBASIC5.64□□□□□ -1.51
XPCQ01831 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.64□□□□□ -1.51
XPCQ01831 RPL23AP25-201ENST00000430973 463 ntBASIC5.64□□□□□ -1.51
XPCQ01831 HMGN2P31-201ENST00000432430 273 ntBASIC5.64□□□□□ -1.51
XPCQ01831 MTATP6P16-201ENST00000434543 526 ntBASIC5.64□□□□□ -1.51
XPCQ01831 RPL35AP22-201ENST00000436855 335 ntBASIC5.64□□□□□ -1.51
XPCQ01831 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC5.64□□□□□ -1.51
XPCQ01831 CBWD4P-201ENST00000445695 655 ntBASIC5.64□□□□□ -1.51
XPCQ01831 AL590399.6-201ENST00000446396 307 ntBASIC5.64□□□□□ -1.51
XPCQ01831 AC016696.1-201ENST00000446949 318 ntBASIC5.64□□□□□ -1.51
XPCQ01831 AC073415.1-201ENST00000449240 153 ntBASIC5.64□□□□□ -1.51
XPCQ01831 RPS11P1-201ENST00000451072 473 ntBASIC5.64□□□□□ -1.51
XPCQ01831 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC5.64□□□□□ -1.51
XPCQ01831 GMFBP1-201ENST00000467831 427 ntBASIC5.64□□□□□ -1.51
XPCQ01831 AC126389.1-201ENST00000477436 290 ntBASIC5.64□□□□□ -1.51
XPCQ01831 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
XPCQ01831 RN7SL323P-201ENST00000494712 295 ntBASIC5.64□□□□□ -1.51
XPCQ01831 EIF4EP3-201ENST00000498782 656 ntBASIC5.64□□□□□ -1.51
XPCQ01831 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC5.64□□□□□ -1.51
XPCQ01831 AC105417.1-201ENST00000514691 285 ntBASIC5.64□□□□□ -1.51
XPCQ01831 RNU6-64P-201ENST00000517119 105 ntBASIC5.64□□□□□ -1.51
XPCQ01831 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC5.64□□□□□ -1.51
XPCQ01831 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC5.64□□□□□ -1.51
XPCQ01831 SUB1P1-201ENST00000524415 382 ntBASIC5.64□□□□□ -1.51
XPCQ01831 AP001029.3-201ENST00000588063 596 ntBASIC5.64□□□□□ -1.51
XPCQ01831 TUG1_1.1-201ENST00000610654 145 ntBASIC5.64□□□□□ -1.51
XPCQ01831 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC5.64□□□□□ -1.51
XPCQ01831 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.64□□□□□ -1.51
XPCQ01831 AL022322.2-201ENST00000624072 20397 ntBASIC5.64□□□□□ -1.51
XPCQ01831 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
XPCQ01831 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC5.63□□□□□ -1.51
XPCQ01831 MTCO1P24-201ENST00000515438 1558 ntBASIC5.63□□□□□ -1.51
XPCQ01831 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
XPCQ01831 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC5.63□□□□□ -1.51
XPCQ01831 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.63□□□□□ -1.51
XPCQ01831 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
XPCQ01831 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
XPCQ01831 AC008079.2-201ENST00000623543 20396 ntBASIC5.63□□□□□ -1.51
XPCQ01831 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
XPCQ01831 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.63□□□□□ -1.51
XPCQ01831 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
XPCQ01831 Y_RNA.356-201ENST00000365475 113 ntBASIC5.63□□□□□ -1.51
XPCQ01831 RNU6-637P-201ENST00000384050 107 ntBASIC5.63□□□□□ -1.51
XPCQ01831 MIR153-1-201ENST00000384914 90 ntBASIC5.63□□□□□ -1.51
XPCQ01831 SNORA57.3-201ENST00000411095 141 ntBASIC5.63□□□□□ -1.51
XPCQ01831 RNA5SP107-201ENST00000411358 122 ntBASIC5.63□□□□□ -1.51
XPCQ01831 MTCYBP8-201ENST00000422855 651 ntBASIC5.63□□□□□ -1.51
XPCQ01831 RPL23AP33-201ENST00000442301 452 ntBASIC5.63□□□□□ -1.51
XPCQ01831 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC5.63□□□□□ -1.51
XPCQ01831 FAM60DP-201ENST00000524174 632 ntBASIC5.63□□□□□ -1.51
XPCQ01831 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC5.63□□□□□ -1.51
XPCQ01831 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
XPCQ01831 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC5.63□□□□□ -1.51
XPCQ01831 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC5.63□□□□□ -1.51
XPCQ01831 AC105429.2-201ENST00000610567 517 ntBASIC5.63□□□□□ -1.51
XPCQ01831 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.63□□□□□ -1.51
XPCQ01831 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.63□□□□□ -1.51
XPCQ01831 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC5.63□□□□□ -1.51
XPCQ01831 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC5.63□□□□□ -1.51
XPCQ01831 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
XPCQ01831 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
XPCQ01831 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
XPCQ01831 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms