Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 AL121917.1-203ENST00000605534 577 ntBASIC1.59□□□□□ -2.16
ABCA4P78363 MTND4P31-201ENST00000425607 1343 ntBASIC1.59□□□□□ -2.16
ABCA4P78363 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
ABCA4P78363 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
ABCA4P78363 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.58□□□□□ -2.16
ABCA4P78363 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
ABCA4P78363 RNA5SP138-201ENST00000365098 114 ntBASIC1.58□□□□□ -2.16
ABCA4P78363 RNU1-109P-201ENST00000383960 147 ntBASIC1.58□□□□□ -2.16
ABCA4P78363 RNU6-629P-201ENST00000384061 103 ntBASIC1.58□□□□□ -2.16
ABCA4P78363 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
ABCA4P78363 AL590084.1-201ENST00000407885 387 ntBASIC1.58□□□□□ -2.16
ABCA4P78363 HMGN2P30-201ENST00000423237 256 ntBASIC1.58□□□□□ -2.16
ABCA4P78363 AC005517.2-201ENST00000424673 553 ntBASIC1.58□□□□□ -2.16
ABCA4P78363 OR4K11P-201ENST00000431829 904 ntBASIC1.58□□□□□ -2.16
ABCA4P78363 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.58□□□□□ -2.16
ABCA4P78363 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.58□□□□□ -2.16
ABCA4P78363 AC080013.2-201ENST00000460866 323 ntBASIC1.58□□□□□ -2.16
ABCA4P78363 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC1.58□□□□□ -2.16
ABCA4P78363 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC1.58□□□□□ -2.16
ABCA4P78363 GZMAP1-201ENST00000503054 631 ntBASIC1.58□□□□□ -2.16
ABCA4P78363 HMGB1P22-201ENST00000505315 124 ntBASIC1.58□□□□□ -2.16
ABCA4P78363 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC1.58□□□□□ -2.16
ABCA4P78363 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.58□□□□□ -2.16
ABCA4P78363 AP001804.3-201ENST00000525146 880 ntBASIC1.58□□□□□ -2.16
ABCA4P78363 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
ABCA4P78363 RPS3AP23-202ENST00000574601 686 ntBASIC1.58□□□□□ -2.16
ABCA4P78363 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
ABCA4P78363 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC1.58□□□□□ -2.16
ABCA4P78363 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC1.58□□□□□ -2.16
ABCA4P78363 PABPC1P9-201ENST00000426076 1612 ntBASIC1.58□□□□□ -2.16
ABCA4P78363 CKAP2P1-201ENST00000555477 2049 ntBASIC1.58□□□□□ -2.16
ABCA4P78363 METTL21EP-201ENST00000298105 713 ntBASIC1.57□□□□□ -2.16
ABCA4P78363 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC1.57□□□□□ -2.16
ABCA4P78363 USP9YP27-201ENST00000418455 438 ntBASIC1.57□□□□□ -2.16
ABCA4P78363 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
ABCA4P78363 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.57□□□□□ -2.16
ABCA4P78363 AC092798.1-201ENST00000458542 409 ntBASIC1.57□□□□□ -2.16
ABCA4P78363 RNU1-123P-201ENST00000458950 160 ntBASIC1.57□□□□□ -2.16
ABCA4P78363 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC1.57□□□□□ -2.16
ABCA4P78363 RPL21P131-201ENST00000497298 483 ntBASIC1.57□□□□□ -2.16
ABCA4P78363 AIG1P1-201ENST00000503376 148 ntBASIC1.57□□□□□ -2.16
ABCA4P78363 MTND5P4-201ENST00000514978 288 ntBASIC1.57□□□□□ -2.16
ABCA4P78363 AC106791.2-201ENST00000604680 391 ntBASIC1.57□□□□□ -2.16
ABCA4P78363 AC013562.2-201ENST00000611632 603 ntBASIC1.57□□□□□ -2.16
ABCA4P78363 AC091953.2-201ENST00000623979 160 ntBASIC1.57□□□□□ -2.16
ABCA4P78363 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.57□□□□□ -2.16
ABCA4P78363 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC1.57□□□□□ -2.16
ABCA4P78363 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
ABCA4P78363 MIR767-201ENST00000390228 109 ntBASIC1.57□□□□□ -2.16
ABCA4P78363 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC1.57□□□□□ -2.16
ABCA4P78363 RSL24D1P2-201ENST00000445584 366 ntBASIC1.57□□□□□ -2.16
ABCA4P78363 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC1.57□□□□□ -2.16
ABCA4P78363 AP000852.1-201ENST00000472460 573 ntBASIC1.57□□□□□ -2.16
ABCA4P78363 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC1.57□□□□□ -2.16
ABCA4P78363 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
ABCA4P78363 AC092436.3-201ENST00000511788 257 ntBASIC1.57□□□□□ -2.16
ABCA4P78363 RAC1P5-201ENST00000512182 576 ntBASIC1.57□□□□□ -2.16
ABCA4P78363 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC1.57□□□□□ -2.16
ABCA4P78363 AC135279.1-201ENST00000543493 504 ntBASIC1.57□□□□□ -2.16
ABCA4P78363 AC013444.2-201ENST00000603317 787 ntBASIC1.57□□□□□ -2.16
ABCA4P78363 AL035411.2-201ENST00000604022 421 ntBASIC1.57□□□□□ -2.16
ABCA4P78363 AC131902.3-201ENST00000611767 581 ntBASIC1.57□□□□□ -2.16
ABCA4P78363 AC007256.1-201ENST00000392253 2765 ntBASIC1.57□□□□□ -2.16
ABCA4P78363 VTRNA1-1-201ENST00000363120 99 ntBASIC1.56□□□□□ -2.16
ABCA4P78363 RNA5SP37-201ENST00000365420 130 ntBASIC1.56□□□□□ -2.16
ABCA4P78363 RNU2-20P-201ENST00000410425 191 ntBASIC1.56□□□□□ -2.16
ABCA4P78363 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC1.56□□□□□ -2.16
ABCA4P78363 RPS15AP40-201ENST00000419621 391 ntBASIC1.56□□□□□ -2.16
ABCA4P78363 AC099677.1-201ENST00000420575 175 ntBASIC1.56□□□□□ -2.16
ABCA4P78363 AC006548.1-201ENST00000427470 102 ntBASIC1.56□□□□□ -2.16
ABCA4P78363 AL590762.3-201ENST00000436372 640 ntBASIC1.56□□□□□ -2.16
ABCA4P78363 AL513321.1-201ENST00000441175 761 ntBASIC1.56□□□□□ -2.16
ABCA4P78363 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC1.56□□□□□ -2.16
ABCA4P78363 AC079804.2-201ENST00000490376 200 ntBASIC1.56□□□□□ -2.16
ABCA4P78363 HMGN1P7-201ENST00000491722 313 ntBASIC1.56□□□□□ -2.16
ABCA4P78363 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.56□□□□□ -2.16
ABCA4P78363 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.56□□□□□ -2.16
ABCA4P78363 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC1.56□□□□□ -2.16
ABCA4P78363 AC012360.2-201ENST00000609349 391 ntBASIC1.56□□□□□ -2.16
ABCA4P78363 MIR6779-201ENST00000617283 64 ntBASIC1.56□□□□□ -2.16
ABCA4P78363 AC007275.1-201ENST00000621243 671 ntBASIC1.56□□□□□ -2.16
ABCA4P78363 AC084768.2-201ENST00000622736 221 ntBASIC1.56□□□□□ -2.16
ABCA4P78363 CR381572.1-201ENST00000625098 102 ntBASIC1.56□□□□□ -2.16
ABCA4P78363 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC1.56□□□□□ -2.16
ABCA4P78363 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
ABCA4P78363 RNU6-582P-201ENST00000362989 107 ntBASIC1.56□□□□□ -2.16
ABCA4P78363 RNU6-31P-201ENST00000384388 108 ntBASIC1.56□□□□□ -2.16
ABCA4P78363 SNORA1.3-201ENST00000384676 136 ntBASIC1.56□□□□□ -2.16
ABCA4P78363 MIR1294-201ENST00000408503 142 ntBASIC1.56□□□□□ -2.16
ABCA4P78363 AF274854.1-201ENST00000413236 615 ntBASIC1.56□□□□□ -2.16
ABCA4P78363 XKRY2-201ENST00000442362 1093 ntBASIC1.56□□□□□ -2.16
ABCA4P78363 MOB1AP2-201ENST00000446060 614 ntBASIC1.56□□□□□ -2.16
ABCA4P78363 RPL12P25-201ENST00000455592 494 ntBASIC1.56□□□□□ -2.16
ABCA4P78363 AC105914.1-201ENST00000511798 226 ntBASIC1.56□□□□□ -2.16
ABCA4P78363 SNORA31.20-201ENST00000517111 133 ntBASIC1.56□□□□□ -2.16
ABCA4P78363 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.56□□□□□ -2.16
ABCA4P78363 AC103810.1-201ENST00000579873 453 ntBASIC1.56□□□□□ -2.16
ABCA4P78363 AC002984.1-201ENST00000591692 448 ntBASIC1.56□□□□□ -2.16
ABCA4P78363 AC091057.2-201ENST00000602594 792 ntBASIC1.56□□□□□ -2.16
ABCA4P78363 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms