Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
RPS3AP61247 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.55□□□□□ -1.84
RPS3AP61247 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.55□□□□□ -1.84
RPS3AP61247 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.55□□□□□ -1.84
RPS3AP61247 AC092104.1-201ENST00000497346 1441 ntBASIC3.54□□□□□ -1.84
RPS3AP61247 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
RPS3AP61247 RPL7P26-201ENST00000333817 754 ntBASIC3.54□□□□□ -1.84
RPS3AP61247 RNU6-1284P-201ENST00000363701 100 ntBASIC3.54□□□□□ -1.84
RPS3AP61247 RNA5SP399-201ENST00000364003 117 ntBASIC3.54□□□□□ -1.84
RPS3AP61247 SNORD116-9-201ENST00000384000 95 ntBASIC3.54□□□□□ -1.84
RPS3AP61247 SNORD116-3-201ENST00000384287 95 ntBASIC3.54□□□□□ -1.84
RPS3AP61247 SNORD116-1-201ENST00000384335 95 ntBASIC3.54□□□□□ -1.84
RPS3AP61247 SNORD116-7-201ENST00000384404 95 ntBASIC3.54□□□□□ -1.84
RPS3AP61247 SNORD116-5-201ENST00000384462 95 ntBASIC3.54□□□□□ -1.84
RPS3AP61247 AC245054.1-201ENST00000420944 258 ntBASIC3.54□□□□□ -1.84
RPS3AP61247 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.54□□□□□ -1.84
RPS3AP61247 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.54□□□□□ -1.84
RPS3AP61247 HMGB1P37-201ENST00000439613 609 ntBASIC3.54□□□□□ -1.84
RPS3AP61247 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.54□□□□□ -1.84
RPS3AP61247 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.54□□□□□ -1.84
RPS3AP61247 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.54□□□□□ -1.84
RPS3AP61247 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.54□□□□□ -1.84
RPS3AP61247 DNAJC19P1-201ENST00000455312 319 ntBASIC3.54□□□□□ -1.84
RPS3AP61247 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.54□□□□□ -1.84
RPS3AP61247 RPL30P5-201ENST00000494923 336 ntBASIC3.54□□□□□ -1.84
RPS3AP61247 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.54□□□□□ -1.84
RPS3AP61247 AC026402.1-201ENST00000513642 170 ntBASIC3.54□□□□□ -1.84
RPS3AP61247 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.54□□□□□ -1.84
RPS3AP61247 Y_RNA.695-201ENST00000516715 107 ntBASIC3.54□□□□□ -1.84
RPS3AP61247 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.54□□□□□ -1.84
RPS3AP61247 AC107934.1-201ENST00000522215 217 ntBASIC3.54□□□□□ -1.84
RPS3AP61247 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
RPS3AP61247 CYCSP30-201ENST00000546447 172 ntBASIC3.54□□□□□ -1.84
RPS3AP61247 RPL21P5-201ENST00000554662 472 ntBASIC3.54□□□□□ -1.84
RPS3AP61247 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.54□□□□□ -1.84
RPS3AP61247 MIR3118-1-201ENST00000581787 76 ntBASIC3.54□□□□□ -1.84
RPS3AP61247 PIGPP4-201ENST00000584447 307 ntBASIC3.54□□□□□ -1.84
RPS3AP61247 AC239868.4-201ENST00000608318 671 ntBASIC3.54□□□□□ -1.84
RPS3AP61247 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
RPS3AP61247 AC068831.7-201ENST00000616954 363 ntBASIC3.54□□□□□ -1.84
RPS3AP61247 AC091953.2-201ENST00000623979 160 ntBASIC3.54□□□□□ -1.84
RPS3AP61247 AC091905.1-201ENST00000624400 311 ntBASIC3.54□□□□□ -1.84
RPS3AP61247 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.54□□□□□ -1.84
RPS3AP61247 AC099654.13-201ENST00000639774 207 ntBASIC3.54□□□□□ -1.84
RPS3AP61247 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.54□□□□□ -1.84
RPS3AP61247 AC058791.1-201ENST00000608412 3198 ntBASIC3.54□□□□□ -1.84
RPS3AP61247 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RPS3AP61247 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RPS3AP61247 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
RPS3AP61247 AC007256.1-201ENST00000392253 2765 ntBASIC3.53□□□□□ -1.84
RPS3AP61247 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RPS3AP61247 Y_RNA.126-201ENST00000363382 111 ntBASIC3.53□□□□□ -1.84
RPS3AP61247 RNY3P13-201ENST00000365542 102 ntBASIC3.53□□□□□ -1.84
RPS3AP61247 SNORA1.3-201ENST00000384676 136 ntBASIC3.53□□□□□ -1.84
RPS3AP61247 RPS4XP3-201ENST00000398541 413 ntBASIC3.53□□□□□ -1.84
RPS3AP61247 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.53□□□□□ -1.84
RPS3AP61247 TAAR7P-201ENST00000436141 242 ntBASIC3.53□□□□□ -1.84
RPS3AP61247 AC093156.1-201ENST00000440382 670 ntBASIC3.53□□□□□ -1.84
RPS3AP61247 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.53□□□□□ -1.84
RPS3AP61247 AC009237.8-201ENST00000445492 379 ntBASIC3.53□□□□□ -1.84
RPS3AP61247 PDSS1P2-201ENST00000449397 678 ntBASIC3.53□□□□□ -1.84
RPS3AP61247 AC073387.1-201ENST00000453261 709 ntBASIC3.53□□□□□ -1.84
RPS3AP61247 MTND1P12-201ENST00000455231 147 ntBASIC3.53□□□□□ -1.84
RPS3AP61247 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.53□□□□□ -1.84
RPS3AP61247 AL672167.3-201ENST00000465951 960 ntBASIC3.53□□□□□ -1.84
RPS3AP61247 AC010631.1-201ENST00000474150 156 ntBASIC3.53□□□□□ -1.84
RPS3AP61247 ACTR3P3-201ENST00000480448 893 ntBASIC3.53□□□□□ -1.84
RPS3AP61247 AC080014.1-201ENST00000496877 1201 ntBASIC3.53□□□□□ -1.84
RPS3AP61247 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.53□□□□□ -1.84
RPS3AP61247 AC110768.1-201ENST00000509222 400 ntBASIC3.53□□□□□ -1.84
RPS3AP61247 AC091965.2-201ENST00000512324 613 ntBASIC3.53□□□□□ -1.84
RPS3AP61247 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
RPS3AP61247 RNU6-390P-201ENST00000516259 103 ntBASIC3.53□□□□□ -1.84
RPS3AP61247 RNA5SP164-201ENST00000516533 110 ntBASIC3.53□□□□□ -1.84
RPS3AP61247 RNU6-1256P-201ENST00000516539 103 ntBASIC3.53□□□□□ -1.84
RPS3AP61247 NRON-201ENST00000517270 370 ntBASIC3.53□□□□□ -1.84
RPS3AP61247 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.53□□□□□ -1.84
RPS3AP61247 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.53□□□□□ -1.84
RPS3AP61247 AC011602.1-201ENST00000546484 331 ntBASIC3.53□□□□□ -1.84
RPS3AP61247 AC007115.1-201ENST00000546853 234 ntBASIC3.53□□□□□ -1.84
RPS3AP61247 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.53□□□□□ -1.84
RPS3AP61247 AC004024.1-201ENST00000549244 247 ntBASIC3.53□□□□□ -1.84
RPS3AP61247 AC093012.1-202ENST00000549403 582 ntBASIC3.53□□□□□ -1.84
RPS3AP61247 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.53□□□□□ -1.84
RPS3AP61247 MIR5685-201ENST00000579080 79 ntBASIC3.53□□□□□ -1.84
RPS3AP61247 MIR4474-201ENST00000579189 78 ntBASIC3.53□□□□□ -1.84
RPS3AP61247 MIR4293-201ENST00000584305 78 ntBASIC3.53□□□□□ -1.84
RPS3AP61247 AC009977.1-201ENST00000586015 570 ntBASIC3.53□□□□□ -1.84
RPS3AP61247 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.53□□□□□ -1.84
RPS3AP61247 AC008962.1-201ENST00000605729 304 ntBASIC3.53□□□□□ -1.84
RPS3AP61247 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.53□□□□□ -1.84
RPS3AP61247 MIR6076-201ENST00000617521 113 ntBASIC3.53□□□□□ -1.84
RPS3AP61247 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.53□□□□□ -1.84
RPS3AP61247 PLCE1P1-201ENST00000622094 305 ntBASIC3.53□□□□□ -1.84
RPS3AP61247 AL603839.4-201ENST00000624658 1005 ntBASIC3.53□□□□□ -1.84
RPS3AP61247 AL136313.1-201ENST00000624804 202 ntBASIC3.53□□□□□ -1.84
RPS3AP61247 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.53□□□□□ -1.84
RPS3AP61247 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RPS3AP61247 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
RPS3AP61247 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms