Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
ACTBP60709 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
ACTBP60709 MTND4P21-201ENST00000453886 1357 ntBASIC2.16□□□□□ -2.06
ACTBP60709 RNU1-112P-201ENST00000364401 164 ntBASIC2.16□□□□□ -2.06
ACTBP60709 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
ACTBP60709 MTCO2P31-201ENST00000402702 684 ntBASIC2.16□□□□□ -2.06
ACTBP60709 AL122016.1-201ENST00000403365 367 ntBASIC2.16□□□□□ -2.06
ACTBP60709 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.16□□□□□ -2.06
ACTBP60709 AL356867.1-201ENST00000429623 299 ntBASIC2.16□□□□□ -2.06
ACTBP60709 AC105272.1-201ENST00000438604 198 ntBASIC2.16□□□□□ -2.06
ACTBP60709 ARF4P4-201ENST00000439608 520 ntBASIC2.16□□□□□ -2.06
ACTBP60709 AC025750.2-201ENST00000442609 450 ntBASIC2.16□□□□□ -2.06
ACTBP60709 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.16□□□□□ -2.06
ACTBP60709 TRGVB-201ENST00000453257 471 ntBASIC2.16□□□□□ -2.06
ACTBP60709 AC128713.1-201ENST00000471495 306 ntBASIC2.16□□□□□ -2.06
ACTBP60709 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
ACTBP60709 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
ACTBP60709 AC097462.2-201ENST00000504623 481 ntBASIC2.16□□□□□ -2.06
ACTBP60709 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.16□□□□□ -2.06
ACTBP60709 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
ACTBP60709 AC048346.1-201ENST00000510247 144 ntBASIC2.16□□□□□ -2.06
ACTBP60709 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
ACTBP60709 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.16□□□□□ -2.06
ACTBP60709 RNA5SP282-201ENST00000516355 108 ntBASIC2.16□□□□□ -2.06
ACTBP60709 RNA5SP135-201ENST00000517019 125 ntBASIC2.16□□□□□ -2.06
ACTBP60709 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
ACTBP60709 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.16□□□□□ -2.06
ACTBP60709 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.16□□□□□ -2.06
ACTBP60709 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.16□□□□□ -2.06
ACTBP60709 EIF4BP1-201ENST00000554881 351 ntBASIC2.16□□□□□ -2.06
ACTBP60709 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.16□□□□□ -2.06
ACTBP60709 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.16□□□□□ -2.06
ACTBP60709 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2.16□□□□□ -2.06
ACTBP60709 RPS3AP23-202ENST00000574601 686 ntBASIC2.16□□□□□ -2.06
ACTBP60709 ISCA1P3-201ENST00000577104 373 ntBASIC2.16□□□□□ -2.06
ACTBP60709 RN7SL622P-201ENST00000585292 275 ntBASIC2.16□□□□□ -2.06
ACTBP60709 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC2.16□□□□□ -2.06
ACTBP60709 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.16□□□□□ -2.06
ACTBP60709 GAS5-AS1-201ENST00000602767 694 ntBASIC2.16□□□□□ -2.06
ACTBP60709 AL645944.1-201ENST00000603857 493 ntBASIC2.16□□□□□ -2.06
ACTBP60709 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC2.16□□□□□ -2.06
ACTBP60709 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
ACTBP60709 AC106730.3-201ENST00000624568 641 ntBASIC2.16□□□□□ -2.06
ACTBP60709 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.16□□□□□ -2.06
ACTBP60709 CCT4P2-201ENST00000233836 1548 ntBASIC2.16□□□□□ -2.06
ACTBP60709 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.16□□□□□ -2.06
ACTBP60709 GDI2P1-201ENST00000429312 1336 ntBASIC2.16□□□□□ -2.06
ACTBP60709 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
ACTBP60709 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
ACTBP60709 MIR9-1-201ENST00000385198 89 ntBASIC2.15□□□□□ -2.07
ACTBP60709 RNU6-920P-201ENST00000410926 92 ntBASIC2.15□□□□□ -2.07
ACTBP60709 MTND1P23-201ENST00000416931 372 ntBASIC2.15□□□□□ -2.07
ACTBP60709 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.15□□□□□ -2.07
ACTBP60709 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC2.15□□□□□ -2.07
ACTBP60709 IFNA11P-201ENST00000446352 526 ntBASIC2.15□□□□□ -2.07
ACTBP60709 DPPA3P1-201ENST00000448050 469 ntBASIC2.15□□□□□ -2.07
ACTBP60709 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC2.15□□□□□ -2.07
ACTBP60709 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
ACTBP60709 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.15□□□□□ -2.07
ACTBP60709 RNU6-1102P-201ENST00000516149 96 ntBASIC2.15□□□□□ -2.07
ACTBP60709 RNU6-798P-201ENST00000516912 103 ntBASIC2.15□□□□□ -2.07
ACTBP60709 COX6CP8-201ENST00000522620 226 ntBASIC2.15□□□□□ -2.07
ACTBP60709 OR5AK1P-201ENST00000524837 922 ntBASIC2.15□□□□□ -2.07
ACTBP60709 AC079600.2-201ENST00000550076 130 ntBASIC2.15□□□□□ -2.07
ACTBP60709 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.15□□□□□ -2.07
ACTBP60709 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.15□□□□□ -2.07
ACTBP60709 ELOCP29-201ENST00000588193 334 ntBASIC2.15□□□□□ -2.07
ACTBP60709 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC2.15□□□□□ -2.07
ACTBP60709 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
ACTBP60709 AL356585.4-201ENST00000623078 1229 ntBASIC2.15□□□□□ -2.07
ACTBP60709 OR5H6-203ENST00000642105 978 ntBASIC2.15□□□□□ -2.07
ACTBP60709 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.15□□□□□ -2.07
ACTBP60709 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
ACTBP60709 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.15□□□□□ -2.07
ACTBP60709 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
ACTBP60709 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
ACTBP60709 MTND4P35-201ENST00000604257 1375 ntBASIC2.14□□□□□ -2.07
ACTBP60709 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
ACTBP60709 RNU6-582P-201ENST00000362989 107 ntBASIC2.14□□□□□ -2.07
ACTBP60709 Y_RNA.111-201ENST00000363248 100 ntBASIC2.14□□□□□ -2.07
ACTBP60709 OR1L1-202ENST00000373686 1083 ntBASIC2.14□□□□□ -2.07
ACTBP60709 SNORA41-201ENST00000384675 132 ntBASIC2.14□□□□□ -2.07
ACTBP60709 AL355497.1-201ENST00000406262 551 ntBASIC2.14□□□□□ -2.07
ACTBP60709 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.14□□□□□ -2.07
ACTBP60709 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC2.14□□□□□ -2.07
ACTBP60709 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.14□□□□□ -2.07
ACTBP60709 AC098826.1-201ENST00000433943 471 ntBASIC2.14□□□□□ -2.07
ACTBP60709 AC000041.1-201ENST00000439655 175 ntBASIC2.14□□□□□ -2.07
ACTBP60709 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.14□□□□□ -2.07
ACTBP60709 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC2.14□□□□□ -2.07
ACTBP60709 AL513328.1-201ENST00000446460 224 ntBASIC2.14□□□□□ -2.07
ACTBP60709 NDUFA5P7-201ENST00000452914 242 ntBASIC2.14□□□□□ -2.07
ACTBP60709 Z82190.1-201ENST00000454534 490 ntBASIC2.14□□□□□ -2.07
ACTBP60709 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.14□□□□□ -2.07
ACTBP60709 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
ACTBP60709 AC084024.2-201ENST00000503480 791 ntBASIC2.14□□□□□ -2.07
ACTBP60709 AC010468.3-201ENST00000508225 458 ntBASIC2.14□□□□□ -2.07
ACTBP60709 AC118282.2-201ENST00000508739 374 ntBASIC2.14□□□□□ -2.07
ACTBP60709 AC109471.1-201ENST00000511631 612 ntBASIC2.14□□□□□ -2.07
ACTBP60709 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms