Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 SNORA59B-202ENST00000578183 701 ntBASIC3.55□□□□□ -1.84
CDH12P55289 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.55□□□□□ -1.84
CDH12P55289 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.55□□□□□ -1.84
CDH12P55289 AC067959.1-201ENST00000604334 379 ntBASIC3.55□□□□□ -1.84
CDH12P55289 MIR6867-201ENST00000610636 67 ntBASIC3.55□□□□□ -1.84
CDH12P55289 AL353748.2-201ENST00000622148 471 ntBASIC3.55□□□□□ -1.84
CDH12P55289 AC139792.3-201ENST00000623525 224 ntBASIC3.55□□□□□ -1.84
CDH12P55289 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.55□□□□□ -1.84
CDH12P55289 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CDH12P55289 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CDH12P55289 RLIMP1-201ENST00000339626 1680 ntBASIC3.55□□□□□ -1.84
CDH12P55289 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.55□□□□□ -1.84
CDH12P55289 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CDH12P55289 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
CDH12P55289 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
CDH12P55289 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.54□□□□□ -1.84
CDH12P55289 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.54□□□□□ -1.84
CDH12P55289 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CDH12P55289 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.54□□□□□ -1.84
CDH12P55289 AC126755.2-208ENST00000327792 462 ntBASIC3.54□□□□□ -1.84
CDH12P55289 AC007685.1-201ENST00000329806 452 ntBASIC3.54□□□□□ -1.84
CDH12P55289 AC138969.1-213ENST00000331436 462 ntBASIC3.54□□□□□ -1.84
CDH12P55289 MIR423-201ENST00000362201 94 ntBASIC3.54□□□□□ -1.84
CDH12P55289 RNY4P14-201ENST00000363656 96 ntBASIC3.54□□□□□ -1.84
CDH12P55289 SNORA56-201ENST00000383966 129 ntBASIC3.54□□□□□ -1.84
CDH12P55289 RNU6-432P-201ENST00000384196 109 ntBASIC3.54□□□□□ -1.84
CDH12P55289 RNU6-39P-201ENST00000384344 107 ntBASIC3.54□□□□□ -1.84
CDH12P55289 RNU6-754P-201ENST00000391166 107 ntBASIC3.54□□□□□ -1.84
CDH12P55289 AC244098.2-201ENST00000422068 99 ntBASIC3.54□□□□□ -1.84
CDH12P55289 MTND4LP11-201ENST00000422184 280 ntBASIC3.54□□□□□ -1.84
CDH12P55289 FTH1P6-201ENST00000430768 320 ntBASIC3.54□□□□□ -1.84
CDH12P55289 AC000111.3-201ENST00000433478 193 ntBASIC3.54□□□□□ -1.84
CDH12P55289 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.54□□□□□ -1.84
CDH12P55289 AC234775.1-201ENST00000454247 670 ntBASIC3.54□□□□□ -1.84
CDH12P55289 RPL21P11-201ENST00000461458 483 ntBASIC3.54□□□□□ -1.84
CDH12P55289 PPIAP15-201ENST00000479662 484 ntBASIC3.54□□□□□ -1.84
CDH12P55289 AC068305.1-201ENST00000497406 726 ntBASIC3.54□□□□□ -1.84
CDH12P55289 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.54□□□□□ -1.84
CDH12P55289 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.54□□□□□ -1.84
CDH12P55289 RNA5SP208-201ENST00000516156 78 ntBASIC3.54□□□□□ -1.84
CDH12P55289 RNU6-64P-201ENST00000517119 105 ntBASIC3.54□□□□□ -1.84
CDH12P55289 IGKV2D-23-201ENST00000518179 286 ntBASIC3.54□□□□□ -1.84
CDH12P55289 AC103783.1-201ENST00000520506 373 ntBASIC3.54□□□□□ -1.84
CDH12P55289 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.54□□□□□ -1.84
CDH12P55289 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.54□□□□□ -1.84
CDH12P55289 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.54□□□□□ -1.84
CDH12P55289 AL121603.1-201ENST00000553815 142 ntBASIC3.54□□□□□ -1.84
CDH12P55289 RPS3AP4-201ENST00000555161 764 ntBASIC3.54□□□□□ -1.84
CDH12P55289 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.54□□□□□ -1.84
CDH12P55289 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.54□□□□□ -1.84
CDH12P55289 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.54□□□□□ -1.84
CDH12P55289 AC244505.7-201ENST00000599675 272 ntBASIC3.54□□□□□ -1.84
CDH12P55289 AC020910.2-201ENST00000603635 610 ntBASIC3.54□□□□□ -1.84
CDH12P55289 AC025449.1-201ENST00000603896 529 ntBASIC3.54□□□□□ -1.84
CDH12P55289 AL137849.1-201ENST00000604767 169 ntBASIC3.54□□□□□ -1.84
CDH12P55289 AP001596.2-201ENST00000608410 312 ntBASIC3.54□□□□□ -1.84
CDH12P55289 AC009161.2-201ENST00000624626 138 ntBASIC3.54□□□□□ -1.84
CDH12P55289 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.54□□□□□ -1.84
CDH12P55289 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.54□□□□□ -1.84
CDH12P55289 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.54□□□□□ -1.84
CDH12P55289 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.54□□□□□ -1.84
CDH12P55289 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.54□□□□□ -1.84
CDH12P55289 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CDH12P55289 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
CDH12P55289 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
CDH12P55289 AC138915.3-201ENST00000562908 1389 ntBASIC3.53□□□□□ -1.84
CDH12P55289 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
CDH12P55289 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
CDH12P55289 CR848007.1-201ENST00000442354 1699 ntBASIC3.53□□□□□ -1.84
CDH12P55289 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CDH12P55289 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.53□□□□□ -1.84
CDH12P55289 RNU6-511P-201ENST00000363496 107 ntBASIC3.53□□□□□ -1.84
CDH12P55289 RNU5E-8P-201ENST00000363502 116 ntBASIC3.53□□□□□ -1.84
CDH12P55289 RNU6-1085P-201ENST00000363576 107 ntBASIC3.53□□□□□ -1.84
CDH12P55289 RNY1P12-201ENST00000364251 105 ntBASIC3.53□□□□□ -1.84
CDH12P55289 U3.15-201ENST00000365398 212 ntBASIC3.53□□□□□ -1.84
CDH12P55289 RNU1-39P-201ENST00000383897 165 ntBASIC3.53□□□□□ -1.84
CDH12P55289 RNU6-278P-201ENST00000390945 109 ntBASIC3.53□□□□□ -1.84
CDH12P55289 AC068050.1-201ENST00000394891 380 ntBASIC3.53□□□□□ -1.84
CDH12P55289 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CDH12P55289 AL022722.2-201ENST00000402519 180 ntBASIC3.53□□□□□ -1.84
CDH12P55289 MIR1277-201ENST00000408536 78 ntBASIC3.53□□□□□ -1.84
CDH12P55289 RN7SKP177-201ENST00000410567 355 ntBASIC3.53□□□□□ -1.84
CDH12P55289 RNU2-62P-201ENST00000410868 191 ntBASIC3.53□□□□□ -1.84
CDH12P55289 RHEBP3-201ENST00000411920 351 ntBASIC3.53□□□□□ -1.84
CDH12P55289 CCDC58P2-201ENST00000417131 366 ntBASIC3.53□□□□□ -1.84
CDH12P55289 AL807761.1-201ENST00000417622 171 ntBASIC3.53□□□□□ -1.84
CDH12P55289 MTATP6P18-201ENST00000417994 673 ntBASIC3.53□□□□□ -1.84
CDH12P55289 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.53□□□□□ -1.84
CDH12P55289 AC137499.1-201ENST00000427602 88 ntBASIC3.53□□□□□ -1.84
CDH12P55289 ELOCP14-201ENST00000428070 331 ntBASIC3.53□□□□□ -1.84
CDH12P55289 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.53□□□□□ -1.84
CDH12P55289 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.53□□□□□ -1.84
CDH12P55289 ELOCP7-201ENST00000439968 331 ntBASIC3.53□□□□□ -1.84
CDH12P55289 MTATP6P23-201ENST00000440153 476 ntBASIC3.53□□□□□ -1.84
CDH12P55289 MTND4P18-201ENST00000447010 465 ntBASIC3.53□□□□□ -1.84
CDH12P55289 RPL23AP20-201ENST00000447965 421 ntBASIC3.53□□□□□ -1.84
CDH12P55289 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.53□□□□□ -1.84
CDH12P55289 AL049714.1-201ENST00000466686 347 ntBASIC3.53□□□□□ -1.84
CDH12P55289 AC110792.1-201ENST00000491826 472 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 155 ms