Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 BNIP3P8-201ENST00000597863 560 ntBASIC3.27□□□□□ -1.89
CDH11P55287 AC007687.1-201ENST00000602704 304 ntBASIC3.27□□□□□ -1.89
CDH11P55287 AC024220.1-201ENST00000603675 484 ntBASIC3.27□□□□□ -1.89
CDH11P55287 AC011451.2-201ENST00000604303 598 ntBASIC3.27□□□□□ -1.89
CDH11P55287 AC012557.2-201ENST00000605919 418 ntBASIC3.27□□□□□ -1.89
CDH11P55287 AC108747.1-201ENST00000609508 535 ntBASIC3.27□□□□□ -1.89
CDH11P55287 AC131902.3-201ENST00000611767 581 ntBASIC3.27□□□□□ -1.89
CDH11P55287 AC091304.9-201ENST00000612091 226 ntBASIC3.27□□□□□ -1.89
CDH11P55287 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
CDH11P55287 XIST_intron.1-201ENST00000619444 68 ntBASIC3.27□□□□□ -1.89
CDH11P55287 AC012314.7-201ENST00000619693 93 ntBASIC3.27□□□□□ -1.89
CDH11P55287 AC244100.1-202ENST00000621554 382 ntBASIC3.27□□□□□ -1.89
CDH11P55287 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC3.27□□□□□ -1.89
CDH11P55287 AL732618.1-201ENST00000623251 301 ntBASIC3.27□□□□□ -1.89
CDH11P55287 AL138713.1-201ENST00000624026 2130 ntBASIC3.27□□□□□ -1.89
CDH11P55287 AC009093.8-201ENST00000641769 292 ntBASIC3.27□□□□□ -1.89
CDH11P55287 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.27□□□□□ -1.89
CDH11P55287 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
CDH11P55287 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CDH11P55287 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.27□□□□□ -1.89
CDH11P55287 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
CDH11P55287 AL157700.1-201ENST00000561973 1432 ntBASIC3.27□□□□□ -1.89
CDH11P55287 AF127577.6-201ENST00000623352 2191 ntBASIC3.27□□□□□ -1.89
CDH11P55287 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CDH11P55287 AC007656.2-201ENST00000624902 4547 ntBASIC3.26□□□□□ -1.89
CDH11P55287 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CDH11P55287 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.26□□□□□ -1.89
CDH11P55287 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CDH11P55287 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CDH11P55287 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CDH11P55287 SNORA73.2-201ENST00000364946 201 ntBASIC3.26□□□□□ -1.89
CDH11P55287 RNU6-55P-201ENST00000411092 107 ntBASIC3.26□□□□□ -1.89
CDH11P55287 RNU6-954P-201ENST00000411355 107 ntBASIC3.26□□□□□ -1.89
CDH11P55287 AL663109.1-201ENST00000411498 844 ntBASIC3.26□□□□□ -1.89
CDH11P55287 RAD23BP2-201ENST00000416003 1207 ntBASIC3.26□□□□□ -1.89
CDH11P55287 OR1AA1P-201ENST00000419597 916 ntBASIC3.26□□□□□ -1.89
CDH11P55287 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.26□□□□□ -1.89
CDH11P55287 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.26□□□□□ -1.89
CDH11P55287 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.26□□□□□ -1.89
CDH11P55287 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.26□□□□□ -1.89
CDH11P55287 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC3.26□□□□□ -1.89
CDH11P55287 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.26□□□□□ -1.89
CDH11P55287 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.26□□□□□ -1.89
CDH11P55287 AC009961.2-201ENST00000435771 251 ntBASIC3.26□□□□□ -1.89
CDH11P55287 UBE2V1P13-201ENST00000436983 439 ntBASIC3.26□□□□□ -1.89
CDH11P55287 RPL17P49-201ENST00000443728 411 ntBASIC3.26□□□□□ -1.89
CDH11P55287 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CDH11P55287 NPM1P49-201ENST00000448027 714 ntBASIC3.26□□□□□ -1.89
CDH11P55287 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.26□□□□□ -1.89
CDH11P55287 RPS24P6-201ENST00000452670 400 ntBASIC3.26□□□□□ -1.89
CDH11P55287 AC006539.3-201ENST00000454258 129 ntBASIC3.26□□□□□ -1.89
CDH11P55287 AC007967.1-201ENST00000455422 1159 ntBASIC3.26□□□□□ -1.89
CDH11P55287 UBDP1-202ENST00000457888 382 ntBASIC3.26□□□□□ -1.89
CDH11P55287 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.26□□□□□ -1.89
CDH11P55287 AC078918.1-201ENST00000498515 228 ntBASIC3.26□□□□□ -1.89
CDH11P55287 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.26□□□□□ -1.89
CDH11P55287 AC096751.1-202ENST00000502691 1067 ntBASIC3.26□□□□□ -1.89
CDH11P55287 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.26□□□□□ -1.89
CDH11P55287 RNU2-27P-201ENST00000516185 142 ntBASIC3.26□□□□□ -1.89
CDH11P55287 SNORA31.20-201ENST00000517111 133 ntBASIC3.26□□□□□ -1.89
CDH11P55287 AC022616.6-201ENST00000520479 119 ntBASIC3.26□□□□□ -1.89
CDH11P55287 IGKV2D-19-201ENST00000523346 262 ntBASIC3.26□□□□□ -1.89
CDH11P55287 MTCYBP41-201ENST00000528913 1123 ntBASIC3.26□□□□□ -1.89
CDH11P55287 AP003181.2-201ENST00000528941 181 ntBASIC3.26□□□□□ -1.89
CDH11P55287 RPL21P5-201ENST00000554662 472 ntBASIC3.26□□□□□ -1.89
CDH11P55287 AL157394.1-201ENST00000562983 1224 ntBASIC3.26□□□□□ -1.89
CDH11P55287 MIR3118-1-201ENST00000581787 76 ntBASIC3.26□□□□□ -1.89
CDH11P55287 MIR5187-201ENST00000583479 76 ntBASIC3.26□□□□□ -1.89
CDH11P55287 AC087683.1-201ENST00000591187 441 ntBASIC3.26□□□□□ -1.89
CDH11P55287 SEPT7P9-203ENST00000604116 343 ntBASIC3.26□□□□□ -1.89
CDH11P55287 AL031176.1-201ENST00000604554 466 ntBASIC3.26□□□□□ -1.89
CDH11P55287 OR10AB1P-201ENST00000609613 938 ntBASIC3.26□□□□□ -1.89
CDH11P55287 MIR8058-201ENST00000615737 89 ntBASIC3.26□□□□□ -1.89
CDH11P55287 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CDH11P55287 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CDH11P55287 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.26□□□□□ -1.89
CDH11P55287 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
CDH11P55287 AC092326.2-201ENST00000624772 1561 ntBASIC3.25□□□□□ -1.89
CDH11P55287 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CDH11P55287 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
CDH11P55287 AL365440.1-201ENST00000436135 2167 ntBASIC3.25□□□□□ -1.89
CDH11P55287 ZNF826P-207ENST00000622273 1910 ntBASIC3.25□□□□□ -1.89
CDH11P55287 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.25□□□□□ -1.89
CDH11P55287 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CDH11P55287 AC068647.1-201ENST00000489539 2265 ntBASIC3.25□□□□□ -1.89
CDH11P55287 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
CDH11P55287 RNU4-1-201ENST00000363925 141 ntBASIC3.25□□□□□ -1.89
CDH11P55287 MIR19A-201ENST00000384878 82 ntBASIC3.25□□□□□ -1.89
CDH11P55287 RNU2-16P-201ENST00000410712 136 ntBASIC3.25□□□□□ -1.89
CDH11P55287 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CDH11P55287 RPS29P4-201ENST00000414733 161 ntBASIC3.25□□□□□ -1.89
CDH11P55287 MTCO3P41-201ENST00000414801 328 ntBASIC3.25□□□□□ -1.89
CDH11P55287 EI24P1-201ENST00000416584 867 ntBASIC3.25□□□□□ -1.89
CDH11P55287 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.25□□□□□ -1.89
CDH11P55287 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.25□□□□□ -1.89
CDH11P55287 AC006946.1-201ENST00000429106 328 ntBASIC3.25□□□□□ -1.89
CDH11P55287 AC091286.1-201ENST00000431233 461 ntBASIC3.25□□□□□ -1.89
CDH11P55287 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CDH11P55287 FTH1P1-201ENST00000437933 532 ntBASIC3.25□□□□□ -1.89
CDH11P55287 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 137.1 ms