Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 RNU6-441P-201ENST00000384545 106 ntBASIC2.89□□□□□ -1.95
HCFC1P51610 SNRPEP2-201ENST00000397592 279 ntBASIC2.89□□□□□ -1.95
HCFC1P51610 RNA5SP31-201ENST00000411144 127 ntBASIC2.89□□□□□ -1.95
HCFC1P51610 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.89□□□□□ -1.95
HCFC1P51610 AL138785.1-201ENST00000425821 331 ntBASIC2.89□□□□□ -1.95
HCFC1P51610 AC008065.1-201ENST00000428525 348 ntBASIC2.89□□□□□ -1.95
HCFC1P51610 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.89□□□□□ -1.95
HCFC1P51610 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC2.89□□□□□ -1.95
HCFC1P51610 ARPC3P1-201ENST00000437218 533 ntBASIC2.89□□□□□ -1.95
HCFC1P51610 RPS24P1-201ENST00000438550 371 ntBASIC2.89□□□□□ -1.95
HCFC1P51610 MTND6P13-201ENST00000443510 523 ntBASIC2.89□□□□□ -1.95
HCFC1P51610 RPL7P52-201ENST00000449200 742 ntBASIC2.89□□□□□ -1.95
HCFC1P51610 KLF3P2-201ENST00000465138 268 ntBASIC2.89□□□□□ -1.95
HCFC1P51610 MTND4P16-201ENST00000466108 1367 ntBASIC2.89□□□□□ -1.95
HCFC1P51610 AC116337.2-201ENST00000477662 156 ntBASIC2.89□□□□□ -1.95
HCFC1P51610 OR5H5P-201ENST00000503164 928 ntBASIC2.89□□□□□ -1.95
HCFC1P51610 TMEM251P1-201ENST00000503717 318 ntBASIC2.89□□□□□ -1.95
HCFC1P51610 CDC42P4-201ENST00000510507 563 ntBASIC2.89□□□□□ -1.95
HCFC1P51610 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC2.89□□□□□ -1.95
HCFC1P51610 RN7SKP82-201ENST00000516786 223 ntBASIC2.89□□□□□ -1.95
HCFC1P51610 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.89□□□□□ -1.95
HCFC1P51610 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC2.89□□□□□ -1.95
HCFC1P51610 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.89□□□□□ -1.95
HCFC1P51610 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC2.89□□□□□ -1.95
HCFC1P51610 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.89□□□□□ -1.95
HCFC1P51610 AC107954.1-201ENST00000565906 727 ntBASIC2.89□□□□□ -1.95
HCFC1P51610 AC010546.1-201ENST00000569391 485 ntBASIC2.89□□□□□ -1.95
HCFC1P51610 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.89□□□□□ -1.95
HCFC1P51610 MIR3913-1-201ENST00000577744 102 ntBASIC2.89□□□□□ -1.95
HCFC1P51610 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.89□□□□□ -1.95
HCFC1P51610 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC2.89□□□□□ -1.95
HCFC1P51610 AC012360.2-201ENST00000609349 391 ntBASIC2.89□□□□□ -1.95
HCFC1P51610 AC008498.1-201ENST00000613012 531 ntBASIC2.89□□□□□ -1.95
HCFC1P51610 AL357080.1-201ENST00000617394 239 ntBASIC2.89□□□□□ -1.95
HCFC1P51610 Xist_exon1.1-201ENST00000618930 85 ntBASIC2.89□□□□□ -1.95
HCFC1P51610 AC092447.10-201ENST00000620607 1652 ntBASIC2.89□□□□□ -1.95
HCFC1P51610 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
HCFC1P51610 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC2.89□□□□□ -1.95
HCFC1P51610 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.89□□□□□ -1.95
HCFC1P51610 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC2.89□□□□□ -1.95
HCFC1P51610 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC2.89□□□□□ -1.95
HCFC1P51610 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC2.89□□□□□ -1.95
HCFC1P51610 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
HCFC1P51610 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
HCFC1P51610 RNU6-517P-201ENST00000384362 110 ntBASIC2.88□□□□□ -1.95
HCFC1P51610 UBE2V1P2-201ENST00000397758 440 ntBASIC2.88□□□□□ -1.95
HCFC1P51610 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.88□□□□□ -1.95
HCFC1P51610 RPS7P13-201ENST00000413955 498 ntBASIC2.88□□□□□ -1.95
HCFC1P51610 MTCO3P41-201ENST00000414801 328 ntBASIC2.88□□□□□ -1.95
HCFC1P51610 AIMP1P1-201ENST00000418670 937 ntBASIC2.88□□□□□ -1.95
HCFC1P51610 RPL31P45-201ENST00000419532 356 ntBASIC2.88□□□□□ -1.95
HCFC1P51610 LSM1P1-201ENST00000438629 273 ntBASIC2.88□□□□□ -1.95
HCFC1P51610 MTATP6P30-201ENST00000443540 664 ntBASIC2.88□□□□□ -1.95
HCFC1P51610 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC2.88□□□□□ -1.95
HCFC1P51610 AL592447.1-201ENST00000447592 540 ntBASIC2.88□□□□□ -1.95
HCFC1P51610 GAPDHP17-201ENST00000449858 1001 ntBASIC2.88□□□□□ -1.95
HCFC1P51610 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.88□□□□□ -1.95
HCFC1P51610 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.88□□□□□ -1.95
HCFC1P51610 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.88□□□□□ -1.95
HCFC1P51610 AC023598.1-201ENST00000472521 361 ntBASIC2.88□□□□□ -1.95
HCFC1P51610 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.88□□□□□ -1.95
HCFC1P51610 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.88□□□□□ -1.95
HCFC1P51610 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.88□□□□□ -1.95
HCFC1P51610 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC2.88□□□□□ -1.95
HCFC1P51610 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.88□□□□□ -1.95
HCFC1P51610 RNU6-720P-201ENST00000516363 108 ntBASIC2.88□□□□□ -1.95
HCFC1P51610 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC2.88□□□□□ -1.95
HCFC1P51610 AP002963.1-201ENST00000530590 184 ntBASIC2.88□□□□□ -1.95
HCFC1P51610 CR383656.7-201ENST00000548164 174 ntBASIC2.88□□□□□ -1.95
HCFC1P51610 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC2.88□□□□□ -1.95
HCFC1P51610 LARP7P3-201ENST00000579888 337 ntBASIC2.88□□□□□ -1.95
HCFC1P51610 MIR4425-201ENST00000580572 84 ntBASIC2.88□□□□□ -1.95
HCFC1P51610 MIR544B-201ENST00000582372 78 ntBASIC2.88□□□□□ -1.95
HCFC1P51610 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
HCFC1P51610 AC087683.1-201ENST00000591187 441 ntBASIC2.88□□□□□ -1.95
HCFC1P51610 AL596327.1-201ENST00000603629 213 ntBASIC2.88□□□□□ -1.95
HCFC1P51610 AC025588.3-201ENST00000604182 274 ntBASIC2.88□□□□□ -1.95
HCFC1P51610 AL162713.1-201ENST00000604480 262 ntBASIC2.88□□□□□ -1.95
HCFC1P51610 AC103710.1-201ENST00000610003 901 ntBASIC2.88□□□□□ -1.95
HCFC1P51610 AC087241.4-201ENST00000612441 480 ntBASIC2.88□□□□□ -1.95
HCFC1P51610 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
HCFC1P51610 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
HCFC1P51610 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
HCFC1P51610 AC114546.3-201ENST00000623582 1734 ntBASIC2.88□□□□□ -1.95
HCFC1P51610 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.88□□□□□ -1.95
HCFC1P51610 RNU4-21P-201ENST00000362802 126 ntBASIC2.88□□□□□ -1.95
HCFC1P51610 RNU4-75P-201ENST00000364621 146 ntBASIC2.88□□□□□ -1.95
HCFC1P51610 RNU6-343P-201ENST00000364709 104 ntBASIC2.88□□□□□ -1.95
HCFC1P51610 RNU6-259P-201ENST00000383999 107 ntBASIC2.88□□□□□ -1.95
HCFC1P51610 RNU6-55P-201ENST00000411092 107 ntBASIC2.88□□□□□ -1.95
HCFC1P51610 RNU6-954P-201ENST00000411355 107 ntBASIC2.88□□□□□ -1.95
HCFC1P51610 AL353678.1-201ENST00000422735 741 ntBASIC2.88□□□□□ -1.95
HCFC1P51610 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
HCFC1P51610 AC104651.1-201ENST00000427559 735 ntBASIC2.88□□□□□ -1.95
HCFC1P51610 AL353705.1-201ENST00000433468 480 ntBASIC2.88□□□□□ -1.95
HCFC1P51610 TXNP1-201ENST00000441872 371 ntBASIC2.88□□□□□ -1.95
HCFC1P51610 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.88□□□□□ -1.95
HCFC1P51610 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.88□□□□□ -1.95
HCFC1P51610 AL353691.1-201ENST00000451332 387 ntBASIC2.88□□□□□ -1.95
HCFC1P51610 AL033528.1-201ENST00000453780 140 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms