Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 S100A11P2-201ENST00000467589 312 ntBASIC1.69□□□□□ -2.14
RPL28P46779 HSPE1P6-201ENST00000479457 291 ntBASIC1.69□□□□□ -2.14
RPL28P46779 AC090096.1-201ENST00000489168 390 ntBASIC1.69□□□□□ -2.14
RPL28P46779 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.69□□□□□ -2.14
RPL28P46779 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.69□□□□□ -2.14
RPL28P46779 SNORA31.22-201ENST00000517204 135 ntBASIC1.69□□□□□ -2.14
RPL28P46779 RNU1-104P-201ENST00000517280 175 ntBASIC1.69□□□□□ -2.14
RPL28P46779 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC1.69□□□□□ -2.14
RPL28P46779 AC027309.2-201ENST00000520566 192 ntBASIC1.69□□□□□ -2.14
RPL28P46779 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC1.69□□□□□ -2.14
RPL28P46779 AC093510.2-201ENST00000562820 896 ntBASIC1.69□□□□□ -2.14
RPL28P46779 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC1.69□□□□□ -2.14
RPL28P46779 MIR4789-201ENST00000577469 82 ntBASIC1.69□□□□□ -2.14
RPL28P46779 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC1.69□□□□□ -2.14
RPL28P46779 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC1.69□□□□□ -2.14
RPL28P46779 AL451007.1-201ENST00000595491 289 ntBASIC1.69□□□□□ -2.14
RPL28P46779 AL645944.1-201ENST00000603857 493 ntBASIC1.69□□□□□ -2.14
RPL28P46779 AP003973.1-201ENST00000604639 691 ntBASIC1.69□□□□□ -2.14
RPL28P46779 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.69□□□□□ -2.14
RPL28P46779 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
RPL28P46779 AC093838.1-201ENST00000613014 469 ntBASIC1.69□□□□□ -2.14
RPL28P46779 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
RPL28P46779 AC005336.3-201ENST00000623833 2679 ntBASIC1.68□□□□□ -2.14
RPL28P46779 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
RPL28P46779 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
RPL28P46779 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
RPL28P46779 RNU5A-1-201ENST00000362698 116 ntBASIC1.68□□□□□ -2.14
RPL28P46779 RNU6-492P-201ENST00000363035 104 ntBASIC1.68□□□□□ -2.14
RPL28P46779 RNA5SP387-201ENST00000364226 106 ntBASIC1.68□□□□□ -2.14
RPL28P46779 SUGT1P1-201ENST00000379514 476 ntBASIC1.68□□□□□ -2.14
RPL28P46779 RNU6-76P-201ENST00000384060 104 ntBASIC1.68□□□□□ -2.14
RPL28P46779 MIR483-201ENST00000385070 76 ntBASIC1.68□□□□□ -2.14
RPL28P46779 AL138827.1-201ENST00000402666 306 ntBASIC1.68□□□□□ -2.14
RPL28P46779 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC1.68□□□□□ -2.14
RPL28P46779 RNA5SP21-201ENST00000410917 96 ntBASIC1.68□□□□□ -2.14
RPL28P46779 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC1.68□□□□□ -2.14
RPL28P46779 AL592310.1-201ENST00000414330 671 ntBASIC1.68□□□□□ -2.14
RPL28P46779 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC1.68□□□□□ -2.14
RPL28P46779 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC1.68□□□□□ -2.14
RPL28P46779 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC1.68□□□□□ -2.14
RPL28P46779 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC1.68□□□□□ -2.14
RPL28P46779 RPL7P44-201ENST00000424827 742 ntBASIC1.68□□□□□ -2.14
RPL28P46779 AC007742.1-201ENST00000425789 329 ntBASIC1.68□□□□□ -2.14
RPL28P46779 AL590383.1-201ENST00000428602 75 ntBASIC1.68□□□□□ -2.14
RPL28P46779 MTND2P5-201ENST00000432656 1006 ntBASIC1.68□□□□□ -2.14
RPL28P46779 RPL23AP83-201ENST00000434984 473 ntBASIC1.68□□□□□ -2.14
RPL28P46779 ELOCP26-201ENST00000436067 329 ntBASIC1.68□□□□□ -2.14
RPL28P46779 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC1.68□□□□□ -2.14
RPL28P46779 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC1.68□□□□□ -2.14
RPL28P46779 AC104389.3-201ENST00000445629 235 ntBASIC1.68□□□□□ -2.14
RPL28P46779 COX6CP12-201ENST00000446748 202 ntBASIC1.68□□□□□ -2.14
RPL28P46779 VN1R10P-201ENST00000447106 875 ntBASIC1.68□□□□□ -2.14
RPL28P46779 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.68□□□□□ -2.14
RPL28P46779 AC092757.1-201ENST00000467293 467 ntBASIC1.68□□□□□ -2.14
RPL28P46779 RBM43P1-201ENST00000476891 1081 ntBASIC1.68□□□□□ -2.14
RPL28P46779 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC1.68□□□□□ -2.14
RPL28P46779 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC1.68□□□□□ -2.14
RPL28P46779 SCARNA15.2-201ENST00000516409 127 ntBASIC1.68□□□□□ -2.14
RPL28P46779 RNA5SP471-201ENST00000516971 106 ntBASIC1.68□□□□□ -2.14
RPL28P46779 IGLV3-17-201ENST00000519099 244 ntBASIC1.68□□□□□ -2.14
RPL28P46779 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC1.68□□□□□ -2.14
RPL28P46779 IGHVII-62-1-201ENST00000519283 235 ntBASIC1.68□□□□□ -2.14
RPL28P46779 AC026616.1-201ENST00000523157 525 ntBASIC1.68□□□□□ -2.14
RPL28P46779 SUB1P1-201ENST00000524415 382 ntBASIC1.68□□□□□ -2.14
RPL28P46779 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.68□□□□□ -2.14
RPL28P46779 ATP5F1P5-201ENST00000526403 760 ntBASIC1.68□□□□□ -2.14
RPL28P46779 COX6CP5-201ENST00000527162 228 ntBASIC1.68□□□□□ -2.14
RPL28P46779 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC1.68□□□□□ -2.14
RPL28P46779 ERP27-202ENST00000540097 993 ntTSL 2 BASIC1.68□□□□□ -2.14
RPL28P46779 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC1.68□□□□□ -2.14
RPL28P46779 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC1.68□□□□□ -2.14
RPL28P46779 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
RPL28P46779 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.68□□□□□ -2.14
RPL28P46779 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC1.68□□□□□ -2.14
RPL28P46779 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC1.68□□□□□ -2.14
RPL28P46779 ZNF971P-201ENST00000562068 1249 ntBASIC1.68□□□□□ -2.14
RPL28P46779 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC1.68□□□□□ -2.14
RPL28P46779 MIR4658-201ENST00000584344 65 ntBASIC1.68□□□□□ -2.14
RPL28P46779 ELOCP29-201ENST00000588193 334 ntBASIC1.68□□□□□ -2.14
RPL28P46779 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC1.68□□□□□ -2.14
RPL28P46779 AC005498.1-201ENST00000592125 465 ntBASIC1.68□□□□□ -2.14
RPL28P46779 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC1.68□□□□□ -2.14
RPL28P46779 DUXAP11-201ENST00000603858 526 ntBASIC1.68□□□□□ -2.14
RPL28P46779 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC1.68□□□□□ -2.14
RPL28P46779 AP001521.1-201ENST00000609150 300 ntBASIC1.68□□□□□ -2.14
RPL28P46779 AC135507.2-201ENST00000612443 309 ntBASIC1.68□□□□□ -2.14
RPL28P46779 AC004009.2-201ENST00000623016 728 ntBASIC1.68□□□□□ -2.14
RPL28P46779 AC097460.3-201ENST00000623099 442 ntBASIC1.68□□□□□ -2.14
RPL28P46779 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC1.68□□□□□ -2.14
RPL28P46779 U6.101-201ENST00000637707 76 ntBASIC1.68□□□□□ -2.14
RPL28P46779 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
RPL28P46779 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.68□□□□□ -2.14
RPL28P46779 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
RPL28P46779 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
RPL28P46779 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
RPL28P46779 SUCLA2P2-201ENST00000417269 1309 ntBASIC1.67□□□□□ -2.14
RPL28P46779 Z82209.1-201ENST00000422141 2135 ntBASIC1.67□□□□□ -2.14
RPL28P46779 PABPC1P9-201ENST00000426076 1612 ntBASIC1.67□□□□□ -2.14
RPL28P46779 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
RPL28P46779 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms