Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AC022483.1-201ENST00000514020 567 ntBASIC2.91□□□□□ -1.94
XRCC1P18887 COX6CP8-201ENST00000522620 226 ntBASIC2.91□□□□□ -1.94
XRCC1P18887 OR5G4P-201ENST00000525251 760 ntBASIC2.91□□□□□ -1.94
XRCC1P18887 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.91□□□□□ -1.94
XRCC1P18887 AC107016.2-201ENST00000547968 190 ntBASIC2.91□□□□□ -1.94
XRCC1P18887 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.91□□□□□ -1.94
XRCC1P18887 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.91□□□□□ -1.94
XRCC1P18887 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.91□□□□□ -1.94
XRCC1P18887 AC010653.1-201ENST00000571108 881 ntBASIC2.91□□□□□ -1.94
XRCC1P18887 AL353997.4-201ENST00000586196 166 ntBASIC2.91□□□□□ -1.94
XRCC1P18887 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.91□□□□□ -1.94
XRCC1P18887 AC078899.3-201ENST00000599065 212 ntBASIC2.91□□□□□ -1.94
XRCC1P18887 AF131215.7-201ENST00000602443 707 ntBASIC2.91□□□□□ -1.94
XRCC1P18887 AP002826.1-201ENST00000608835 315 ntBASIC2.91□□□□□ -1.94
XRCC1P18887 AC107871.2-201ENST00000612894 502 ntBASIC2.91□□□□□ -1.94
XRCC1P18887 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.91□□□□□ -1.94
XRCC1P18887 AP000776.1-201ENST00000530032 1663 ntBASIC2.91□□□□□ -1.94
XRCC1P18887 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.91□□□□□ -1.94
XRCC1P18887 AL355596.1-201ENST00000565399 3996 ntBASIC2.91□□□□□ -1.94
XRCC1P18887 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.91□□□□□ -1.94
XRCC1P18887 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
XRCC1P18887 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
XRCC1P18887 DEFB108F-201ENST00000344638 222 ntBASIC2.9□□□□□ -1.95
XRCC1P18887 AL161781.1-201ENST00000354277 403 ntBASIC2.9□□□□□ -1.95
XRCC1P18887 EEF1A1P41-201ENST00000414667 207 ntBASIC2.9□□□□□ -1.95
XRCC1P18887 UBE2D3P2-201ENST00000424409 445 ntBASIC2.9□□□□□ -1.95
XRCC1P18887 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.9□□□□□ -1.95
XRCC1P18887 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.9□□□□□ -1.95
XRCC1P18887 MTCYBP45-201ENST00000435243 565 ntBASIC2.9□□□□□ -1.95
XRCC1P18887 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.9□□□□□ -1.95
XRCC1P18887 AC107083.1-201ENST00000439643 279 ntBASIC2.9□□□□□ -1.95
XRCC1P18887 AL645638.1-201ENST00000440519 361 ntBASIC2.9□□□□□ -1.95
XRCC1P18887 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.9□□□□□ -1.95
XRCC1P18887 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.9□□□□□ -1.95
XRCC1P18887 RNA5SP216-201ENST00000516111 123 ntBASIC2.9□□□□□ -1.95
XRCC1P18887 RNU6-311P-201ENST00000516224 102 ntBASIC2.9□□□□□ -1.95
XRCC1P18887 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.9□□□□□ -1.95
XRCC1P18887 ERHP1-201ENST00000523006 310 ntBASIC2.9□□□□□ -1.95
XRCC1P18887 DEFB108D-201ENST00000527787 222 ntBASIC2.9□□□□□ -1.95
XRCC1P18887 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.9□□□□□ -1.95
XRCC1P18887 OR6C7P-201ENST00000547875 934 ntBASIC2.9□□□□□ -1.95
XRCC1P18887 MTND4P33-201ENST00000556706 766 ntBASIC2.9□□□□□ -1.95
XRCC1P18887 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.9□□□□□ -1.95
XRCC1P18887 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC2.9□□□□□ -1.95
XRCC1P18887 AC106782.4-201ENST00000568264 210 ntBASIC2.9□□□□□ -1.95
XRCC1P18887 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC2.9□□□□□ -1.95
XRCC1P18887 AL592221.1-201ENST00000605266 382 ntBASIC2.9□□□□□ -1.95
XRCC1P18887 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.9□□□□□ -1.95
XRCC1P18887 AC009974.1-201ENST00000608881 455 ntBASIC2.9□□□□□ -1.95
XRCC1P18887 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC2.9□□□□□ -1.95
XRCC1P18887 AC007318.2-201ENST00000620999 243 ntBASIC2.9□□□□□ -1.95
XRCC1P18887 LRRC77P-213ENST00000637727 880 ntBASIC2.9□□□□□ -1.95
XRCC1P18887 AC009812.4-201ENST00000569134 1805 ntBASIC2.9□□□□□ -1.95
XRCC1P18887 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.9□□□□□ -1.95
XRCC1P18887 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
XRCC1P18887 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
XRCC1P18887 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
XRCC1P18887 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.89□□□□□ -1.95
XRCC1P18887 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.89□□□□□ -1.95
XRCC1P18887 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.89□□□□□ -1.95
XRCC1P18887 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.89□□□□□ -1.95
XRCC1P18887 SNORA72.3-201ENST00000365074 132 ntBASIC2.89□□□□□ -1.95
XRCC1P18887 U8.9-201ENST00000365667 134 ntBASIC2.89□□□□□ -1.95
XRCC1P18887 MIR634-201ENST00000385208 97 ntBASIC2.89□□□□□ -1.95
XRCC1P18887 RNU6-1242P-201ENST00000391052 103 ntBASIC2.89□□□□□ -1.95
XRCC1P18887 U3.26-201ENST00000391236 204 ntBASIC2.89□□□□□ -1.95
XRCC1P18887 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC2.89□□□□□ -1.95
XRCC1P18887 AC104332.2-201ENST00000429959 156 ntBASIC2.89□□□□□ -1.95
XRCC1P18887 ZYG11AP1-201ENST00000430329 837 ntBASIC2.89□□□□□ -1.95
XRCC1P18887 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
XRCC1P18887 RPS25P9-201ENST00000435591 252 ntBASIC2.89□□□□□ -1.95
XRCC1P18887 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC2.89□□□□□ -1.95
XRCC1P18887 MTND5P14-201ENST00000441481 1267 ntBASIC2.89□□□□□ -1.95
XRCC1P18887 RPL17P49-201ENST00000443728 411 ntBASIC2.89□□□□□ -1.95
XRCC1P18887 BX322784.1-201ENST00000455793 1077 ntBASIC2.89□□□□□ -1.95
XRCC1P18887 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC2.89□□□□□ -1.95
XRCC1P18887 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.89□□□□□ -1.95
XRCC1P18887 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.89□□□□□ -1.95
XRCC1P18887 AC017037.2-201ENST00000513850 890 ntBASIC2.89□□□□□ -1.95
XRCC1P18887 RNU6-150P-201ENST00000516237 95 ntBASIC2.89□□□□□ -1.95
XRCC1P18887 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.89□□□□□ -1.95
XRCC1P18887 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.89□□□□□ -1.95
XRCC1P18887 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.89□□□□□ -1.95
XRCC1P18887 AL157394.1-201ENST00000562983 1224 ntBASIC2.89□□□□□ -1.95
XRCC1P18887 AC096644.4-201ENST00000563417 2912 ntBASIC2.89□□□□□ -1.95
XRCC1P18887 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
XRCC1P18887 MIR3921-201ENST00000577308 85 ntBASIC2.89□□□□□ -1.95
XRCC1P18887 OR4K8P-201ENST00000578842 1048 ntBASIC2.89□□□□□ -1.95
XRCC1P18887 COX6CP3-201ENST00000580869 223 ntBASIC2.89□□□□□ -1.95
XRCC1P18887 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.89□□□□□ -1.95
XRCC1P18887 VN1R82P-201ENST00000601481 356 ntBASIC2.89□□□□□ -1.95
XRCC1P18887 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC2.89□□□□□ -1.95
XRCC1P18887 BBIP1P1-201ENST00000602999 279 ntBASIC2.89□□□□□ -1.95
XRCC1P18887 AC106900.2-201ENST00000604994 317 ntBASIC2.89□□□□□ -1.95
XRCC1P18887 AC080013.3-201ENST00000606839 578 ntBASIC2.89□□□□□ -1.95
XRCC1P18887 AC068831.7-201ENST00000616954 363 ntBASIC2.89□□□□□ -1.95
XRCC1P18887 MIR6130-201ENST00000619419 109 ntBASIC2.89□□□□□ -1.95
XRCC1P18887 AC002550.2-201ENST00000621246 394 ntBASIC2.89□□□□□ -1.95
XRCC1P18887 AC090617.7-201ENST00000623952 126 ntBASIC2.89□□□□□ -1.95
XRCC1P18887 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms