Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.6□□□□□ -1.99
TPM1P09493 AL691517.1-201ENST00000440833 1235 ntBASIC2.6□□□□□ -1.99
TPM1P09493 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.6□□□□□ -1.99
TPM1P09493 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.6□□□□□ -1.99
TPM1P09493 AC107626.1-201ENST00000471084 183 ntBASIC2.6□□□□□ -1.99
TPM1P09493 LINC00888-204ENST00000487386 421 ntBASIC2.6□□□□□ -1.99
TPM1P09493 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
TPM1P09493 AC022483.1-201ENST00000514020 567 ntBASIC2.6□□□□□ -1.99
TPM1P09493 SETP12-201ENST00000514068 805 ntBASIC2.6□□□□□ -1.99
TPM1P09493 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.6□□□□□ -1.99
TPM1P09493 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.6□□□□□ -1.99
TPM1P09493 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.6□□□□□ -1.99
TPM1P09493 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.6□□□□□ -1.99
TPM1P09493 AP001317.1-201ENST00000531194 960 ntBASIC2.6□□□□□ -1.99
TPM1P09493 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.6□□□□□ -1.99
TPM1P09493 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.6□□□□□ -1.99
TPM1P09493 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.6□□□□□ -1.99
TPM1P09493 OR4K8P-201ENST00000578842 1048 ntBASIC2.6□□□□□ -1.99
TPM1P09493 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.6□□□□□ -1.99
TPM1P09493 VN1R78P-201ENST00000597393 564 ntBASIC2.6□□□□□ -1.99
TPM1P09493 AL356280.1-201ENST00000603614 379 ntBASIC2.6□□□□□ -1.99
TPM1P09493 AL355877.2-201ENST00000603670 358 ntBASIC2.6□□□□□ -1.99
TPM1P09493 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.6□□□□□ -1.99
TPM1P09493 AL137790.1-201ENST00000634283 177 ntBASIC2.6□□□□□ -1.99
TPM1P09493 AL590396.4-201ENST00000636779 956 ntBASIC2.6□□□□□ -1.99
TPM1P09493 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.59□□□□□ -1.99
TPM1P09493 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
TPM1P09493 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
TPM1P09493 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
TPM1P09493 RN7SKP226-201ENST00000364912 300 ntBASIC2.59□□□□□ -1.99
TPM1P09493 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.59□□□□□ -1.99
TPM1P09493 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
TPM1P09493 WARS2P1-201ENST00000429678 537 ntBASIC2.59□□□□□ -1.99
TPM1P09493 AC234064.1-201ENST00000436312 247 ntBASIC2.59□□□□□ -1.99
TPM1P09493 THAP5P1-201ENST00000439089 262 ntBASIC2.59□□□□□ -1.99
TPM1P09493 AC044797.1-201ENST00000445744 679 ntBASIC2.59□□□□□ -1.99
TPM1P09493 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.59□□□□□ -1.99
TPM1P09493 AC104435.1-201ENST00000483483 166 ntBASIC2.59□□□□□ -1.99
TPM1P09493 AC011825.1-201ENST00000484967 388 ntBASIC2.59□□□□□ -1.99
TPM1P09493 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.59□□□□□ -1.99
TPM1P09493 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
TPM1P09493 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.59□□□□□ -1.99
TPM1P09493 SNORA76.2-201ENST00000517095 137 ntBASIC2.59□□□□□ -1.99
TPM1P09493 AC011611.5-201ENST00000552477 578 ntBASIC2.59□□□□□ -1.99
TPM1P09493 AC093510.2-201ENST00000562820 896 ntBASIC2.59□□□□□ -1.99
TPM1P09493 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.59□□□□□ -1.99
TPM1P09493 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.59□□□□□ -1.99
TPM1P09493 AC040174.2-201ENST00000602701 465 ntBASIC2.59□□□□□ -1.99
TPM1P09493 AL121917.1-203ENST00000605534 577 ntBASIC2.59□□□□□ -1.99
TPM1P09493 AC103710.4-201ENST00000609301 899 ntBASIC2.59□□□□□ -1.99
TPM1P09493 AC096577.2-201ENST00000611455 153 ntBASIC2.59□□□□□ -1.99
TPM1P09493 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
TPM1P09493 AC093838.1-201ENST00000613014 469 ntBASIC2.59□□□□□ -1.99
TPM1P09493 AC104307.1-201ENST00000616142 196 ntBASIC2.59□□□□□ -1.99
TPM1P09493 AC026634.1-201ENST00000634369 198 ntBASIC2.59□□□□□ -1.99
TPM1P09493 AL049641.1-201ENST00000441055 1948 ntBASIC2.59□□□□□ -1.99
TPM1P09493 CKAP2P1-201ENST00000555477 2049 ntBASIC2.59□□□□□ -2
TPM1P09493 AC009902.3-201ENST00000606235 2172 ntBASIC2.59□□□□□ -2
TPM1P09493 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
TPM1P09493 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.58□□□□□ -2
TPM1P09493 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.58□□□□□ -2
TPM1P09493 AC073346.2-201ENST00000624724 2058 ntBASIC2.58□□□□□ -2
TPM1P09493 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
TPM1P09493 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
TPM1P09493 RNU5A-1-201ENST00000362698 116 ntBASIC2.58□□□□□ -2
TPM1P09493 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC2.58□□□□□ -2
TPM1P09493 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.58□□□□□ -2
TPM1P09493 SNORA48.7-201ENST00000391302 135 ntBASIC2.58□□□□□ -2
TPM1P09493 AL035405.1-201ENST00000400795 710 ntBASIC2.58□□□□□ -2
TPM1P09493 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.58□□□□□ -2
TPM1P09493 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC2.58□□□□□ -2
TPM1P09493 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC2.58□□□□□ -2
TPM1P09493 RPL36AP51-201ENST00000487216 318 ntBASIC2.58□□□□□ -2
TPM1P09493 RNA5SP320-201ENST00000516263 124 ntBASIC2.58□□□□□ -2
TPM1P09493 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.58□□□□□ -2
TPM1P09493 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.58□□□□□ -2
TPM1P09493 AC023824.2-201ENST00000566185 400 ntBASIC2.58□□□□□ -2
TPM1P09493 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.58□□□□□ -2
TPM1P09493 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.58□□□□□ -2
TPM1P09493 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.58□□□□□ -2
TPM1P09493 AL022067.1-201ENST00000602426 454 ntBASIC2.58□□□□□ -2
TPM1P09493 AC007179.3-201ENST00000604976 235 ntBASIC2.58□□□□□ -2
TPM1P09493 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC2.58□□□□□ -2
TPM1P09493 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.58□□□□□ -2
TPM1P09493 MIR1291-201ENST00000627649 87 ntBASIC2.58□□□□□ -2
TPM1P09493 MIR7515-201ENST00000637837 67 ntBASIC2.58□□□□□ -2
TPM1P09493 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
TPM1P09493 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
TPM1P09493 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
TPM1P09493 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
TPM1P09493 RNU6-839P-201ENST00000363347 108 ntBASIC2.57□□□□□ -2
TPM1P09493 RNU6-301P-201ENST00000384277 107 ntBASIC2.57□□□□□ -2
TPM1P09493 SNORA51.11-201ENST00000384442 131 ntBASIC2.57□□□□□ -2
TPM1P09493 AL359511.1-201ENST00000402970 211 ntBASIC2.57□□□□□ -2
TPM1P09493 RPS3AP24-201ENST00000407896 734 ntBASIC2.57□□□□□ -2
TPM1P09493 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.57□□□□□ -2
TPM1P09493 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.57□□□□□ -2
TPM1P09493 RAC1P8-201ENST00000427086 527 ntBASIC2.57□□□□□ -2
TPM1P09493 MTATP6P11-201ENST00000428071 670 ntBASIC2.57□□□□□ -2
TPM1P09493 FCF1P1-201ENST00000432690 571 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms