Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.12□□□□□ -1.75
RHOP08100 OR4T1P-201ENST00000554933 911 ntBASIC4.12□□□□□ -1.75
RHOP08100 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.12□□□□□ -1.75
RHOP08100 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC4.12□□□□□ -1.75
RHOP08100 HMGB1P6-201ENST00000569046 646 ntBASIC4.12□□□□□ -1.75
RHOP08100 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.12□□□□□ -1.75
RHOP08100 AC025449.1-201ENST00000603896 529 ntBASIC4.12□□□□□ -1.75
RHOP08100 AL353621.2-201ENST00000605340 133 ntBASIC4.12□□□□□ -1.75
RHOP08100 AL136363.1-201ENST00000605349 337 ntBASIC4.12□□□□□ -1.75
RHOP08100 MIR4496-201ENST00000635896 61 ntBASIC4.12□□□□□ -1.75
RHOP08100 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RHOP08100 AC018529.3-201ENST00000624212 2254 ntBASIC4.12□□□□□ -1.75
RHOP08100 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
RHOP08100 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RHOP08100 MTND4P29-201ENST00000503122 1372 ntBASIC4.12□□□□□ -1.75
RHOP08100 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.12□□□□□ -1.75
RHOP08100 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
RHOP08100 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
RHOP08100 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RHOP08100 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
RHOP08100 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RHOP08100 ZNF734P-201ENST00000419494 1534 ntBASIC4.11□□□□□ -1.75
RHOP08100 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.11□□□□□ -1.75
RHOP08100 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.11□□□□□ -1.75
RHOP08100 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RHOP08100 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RHOP08100 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RHOP08100 Y_RNA.72-201ENST00000362894 103 ntBASIC4.11□□□□□ -1.75
RHOP08100 RNU5A-8P-201ENST00000364102 114 ntBASIC4.11□□□□□ -1.75
RHOP08100 Y_RNA.813-201ENST00000364639 102 ntBASIC4.11□□□□□ -1.75
RHOP08100 Y_RNA.263-201ENST00000364659 114 ntBASIC4.11□□□□□ -1.75
RHOP08100 Y_RNA.333-201ENST00000365274 102 ntBASIC4.11□□□□□ -1.75
RHOP08100 SNORA5A-201ENST00000384111 134 ntBASIC4.11□□□□□ -1.75
RHOP08100 MT-TD-201ENST00000387419 68 ntBASIC4.11□□□□□ -1.75
RHOP08100 LAP3P1-201ENST00000403648 294 ntBASIC4.11□□□□□ -1.75
RHOP08100 AL160275.2-201ENST00000412010 394 ntBASIC4.11□□□□□ -1.75
RHOP08100 RPS15AP12-201ENST00000419498 388 ntBASIC4.11□□□□□ -1.75
RHOP08100 RPS12P23-201ENST00000419579 400 ntBASIC4.11□□□□□ -1.75
RHOP08100 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.11□□□□□ -1.75
RHOP08100 AL513185.2-201ENST00000425543 193 ntBASIC4.11□□□□□ -1.75
RHOP08100 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RHOP08100 AC091286.1-201ENST00000431233 461 ntBASIC4.11□□□□□ -1.75
RHOP08100 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.11□□□□□ -1.75
RHOP08100 AC093156.1-201ENST00000440382 670 ntBASIC4.11□□□□□ -1.75
RHOP08100 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.11□□□□□ -1.75
RHOP08100 AC016691.1-201ENST00000441321 413 ntBASIC4.11□□□□□ -1.75
RHOP08100 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.11□□□□□ -1.75
RHOP08100 BX276092.4-201ENST00000452056 248 ntBASIC4.11□□□□□ -1.75
RHOP08100 AC092001.1-201ENST00000453012 261 ntBASIC4.11□□□□□ -1.75
RHOP08100 MTND1P9-201ENST00000453775 944 ntBASIC4.11□□□□□ -1.75
RHOP08100 PMCHL2-203ENST00000457791 237 ntBASIC4.11□□□□□ -1.75
RHOP08100 RPS4XP10-201ENST00000465034 731 ntBASIC4.11□□□□□ -1.75
RHOP08100 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.11□□□□□ -1.75
RHOP08100 RPL39P36-201ENST00000490784 156 ntBASIC4.11□□□□□ -1.75
RHOP08100 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.11□□□□□ -1.75
RHOP08100 AC139783.2-201ENST00000504847 1145 ntBASIC4.11□□□□□ -1.75
RHOP08100 AC114786.4-201ENST00000508771 728 ntBASIC4.11□□□□□ -1.75
RHOP08100 MTND3P22-201ENST00000510932 243 ntBASIC4.11□□□□□ -1.75
RHOP08100 RNU6-1220P-201ENST00000517126 108 ntBASIC4.11□□□□□ -1.75
RHOP08100 RN7SKP234-201ENST00000517173 224 ntBASIC4.11□□□□□ -1.75
RHOP08100 IGLVIV-53-201ENST00000520107 367 ntBASIC4.11□□□□□ -1.75
RHOP08100 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC4.11□□□□□ -1.75
RHOP08100 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC4.11□□□□□ -1.75
RHOP08100 KC877982.1-201ENST00000602313 470 ntBASIC4.11□□□□□ -1.75
RHOP08100 LLPHP1-201ENST00000603571 367 ntBASIC4.11□□□□□ -1.75
RHOP08100 BNIP3P10-201ENST00000605360 577 ntBASIC4.11□□□□□ -1.75
RHOP08100 AL158211.4-201ENST00000606988 584 ntBASIC4.11□□□□□ -1.75
RHOP08100 RMST_3.1-201ENST00000611651 109 ntBASIC4.11□□□□□ -1.75
RHOP08100 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.11□□□□□ -1.75
RHOP08100 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC4.11□□□□□ -1.75
RHOP08100 AL138713.1-201ENST00000624026 2130 ntBASIC4.11□□□□□ -1.75
RHOP08100 AC067931.1-201ENST00000624190 671 ntBASIC4.11□□□□□ -1.75
RHOP08100 AL359697.1-201ENST00000624879 587 ntBASIC4.11□□□□□ -1.75
RHOP08100 AL159972.1-201ENST00000625150 448 ntBASIC4.11□□□□□ -1.75
RHOP08100 AL034408.1-202ENST00000636088 415 ntBASIC4.11□□□□□ -1.75
RHOP08100 AC009093.8-201ENST00000641769 292 ntBASIC4.11□□□□□ -1.75
RHOP08100 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
RHOP08100 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
RHOP08100 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.11□□□□□ -1.75
RHOP08100 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RHOP08100 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
RHOP08100 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RHOP08100 AC007390.2-201ENST00000606229 3803 ntBASIC4.1□□□□□ -1.75
RHOP08100 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.1□□□□□ -1.75
RHOP08100 AC105074.1-201ENST00000623380 3095 ntBASIC4.1□□□□□ -1.75
RHOP08100 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.1□□□□□ -1.75
RHOP08100 RNU4-76P-201ENST00000364509 141 ntBASIC4.1□□□□□ -1.75
RHOP08100 U3.15-201ENST00000365398 212 ntBASIC4.1□□□□□ -1.75
RHOP08100 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
RHOP08100 SNORD51-201ENST00000384320 80 ntBASIC4.1□□□□□ -1.75
RHOP08100 Y_RNA.548-201ENST00000384656 105 ntBASIC4.1□□□□□ -1.75
RHOP08100 MIR124-3-201ENST00000384866 87 ntBASIC4.1□□□□□ -1.75
RHOP08100 RNU6-1158P-201ENST00000391167 107 ntBASIC4.1□□□□□ -1.75
RHOP08100 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RHOP08100 AC068050.1-201ENST00000394891 380 ntBASIC4.1□□□□□ -1.75
RHOP08100 RPL21P17-201ENST00000397467 475 ntBASIC4.1□□□□□ -1.75
RHOP08100 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.1□□□□□ -1.75
RHOP08100 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.1□□□□□ -1.75
RHOP08100 TIMM9P1-201ENST00000436122 256 ntBASIC4.1□□□□□ -1.75
RHOP08100 FTH1P1-201ENST00000437933 532 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms