Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
SPTA1P02549 RPL30P3-201ENST00000424262 333 ntBASIC1.39□□□□□ -2.19
SPTA1P02549 AL445687.1-201ENST00000439946 251 ntBASIC1.39□□□□□ -2.19
SPTA1P02549 COX6CP12-201ENST00000446748 202 ntBASIC1.39□□□□□ -2.19
SPTA1P02549 AC089999.1-201ENST00000460336 374 ntBASIC1.39□□□□□ -2.19
SPTA1P02549 MIR6078-201ENST00000611069 100 ntBASIC1.39□□□□□ -2.19
SPTA1P02549 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
SPTA1P02549 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.38□□□□□ -2.19
SPTA1P02549 THAP5P1-201ENST00000439089 262 ntBASIC1.38□□□□□ -2.19
SPTA1P02549 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC1.38□□□□□ -2.19
SPTA1P02549 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.38□□□□□ -2.19
SPTA1P02549 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC1.38□□□□□ -2.19
SPTA1P02549 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
SPTA1P02549 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.38□□□□□ -2.19
SPTA1P02549 AL109653.1-201ENST00000603091 248 ntBASIC1.38□□□□□ -2.19
SPTA1P02549 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.38□□□□□ -2.19
SPTA1P02549 AC011890.2-201ENST00000613393 294 ntBASIC1.38□□□□□ -2.19
SPTA1P02549 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC1.38□□□□□ -2.19
SPTA1P02549 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
SPTA1P02549 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.38□□□□□ -2.19
SPTA1P02549 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
SPTA1P02549 RN7SKP101-201ENST00000411376 320 ntBASIC1.38□□□□□ -2.19
SPTA1P02549 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC1.38□□□□□ -2.19
SPTA1P02549 AC009965.2-201ENST00000425328 970 ntBASIC1.38□□□□□ -2.19
SPTA1P02549 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.38□□□□□ -2.19
SPTA1P02549 HMGB1P12-201ENST00000438594 598 ntBASIC1.38□□□□□ -2.19
SPTA1P02549 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
SPTA1P02549 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.38□□□□□ -2.19
SPTA1P02549 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.38□□□□□ -2.19
SPTA1P02549 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC1.38□□□□□ -2.19
SPTA1P02549 AC036111.3-201ENST00000526389 112 ntBASIC1.38□□□□□ -2.19
SPTA1P02549 MIR6788-201ENST00000618842 66 ntBASIC1.38□□□□□ -2.19
SPTA1P02549 ZNF271P-202ENST00000465539 1970 ntBASIC1.37□□□□□ -2.19
SPTA1P02549 RNU4-13P-201ENST00000364019 141 ntBASIC1.37□□□□□ -2.19
SPTA1P02549 U8.9-201ENST00000365667 134 ntBASIC1.37□□□□□ -2.19
SPTA1P02549 AC092638.1-201ENST00000411966 1275 ntBASIC1.37□□□□□ -2.19
SPTA1P02549 RPS3AP44-201ENST00000425466 790 ntBASIC1.37□□□□□ -2.19
SPTA1P02549 IFNWP4-201ENST00000453148 294 ntBASIC1.37□□□□□ -2.19
SPTA1P02549 PTGES3P5-201ENST00000455109 434 ntBASIC1.37□□□□□ -2.19
SPTA1P02549 AL583843.1-201ENST00000456070 346 ntBASIC1.37□□□□□ -2.19
SPTA1P02549 MTND5P4-201ENST00000514978 288 ntBASIC1.37□□□□□ -2.19
SPTA1P02549 CD24P2-201ENST00000565486 219 ntBASIC1.37□□□□□ -2.19
SPTA1P02549 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.37□□□□□ -2.19
SPTA1P02549 AL121594.5-201ENST00000631724 573 ntBASIC1.37□□□□□ -2.19
SPTA1P02549 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.37□□□□□ -2.19
SPTA1P02549 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
SPTA1P02549 AC009487.4-201ENST00000624969 3585 ntBASIC1.37□□□□□ -2.19
SPTA1P02549 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
SPTA1P02549 MFF-206ENST00000392059 1710 ntTSL 5 BASIC1.37□□□□□ -2.19
SPTA1P02549 RNU1-133P-201ENST00000364867 167 ntBASIC1.37□□□□□ -2.19
SPTA1P02549 RNU1-139P-201ENST00000391307 165 ntBASIC1.37□□□□□ -2.19
SPTA1P02549 AC239798.3-201ENST00000454459 408 ntBASIC1.37□□□□□ -2.19
SPTA1P02549 RNU6-1334P-201ENST00000516032 105 ntBASIC1.37□□□□□ -2.19
SPTA1P02549 AC022790.1-201ENST00000522872 204 ntBASIC1.37□□□□□ -2.19
SPTA1P02549 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC1.37□□□□□ -2.19
SPTA1P02549 C2orf27A-204ENST00000623058 969 ntBASIC1.37□□□□□ -2.19
SPTA1P02549 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.36□□□□□ -2.19
SPTA1P02549 RNU6-1263P-201ENST00000384601 106 ntBASIC1.36□□□□□ -2.19
SPTA1P02549 MIR758-201ENST00000390227 88 ntBASIC1.36□□□□□ -2.19
SPTA1P02549 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
SPTA1P02549 MCTS2P-201ENST00000394552 546 ntBASIC1.36□□□□□ -2.19
SPTA1P02549 HMGN1P14-201ENST00000412459 517 ntBASIC1.36□□□□□ -2.19
SPTA1P02549 AC005517.2-201ENST00000424673 553 ntBASIC1.36□□□□□ -2.19
SPTA1P02549 RSL24D1P2-201ENST00000445584 366 ntBASIC1.36□□□□□ -2.19
SPTA1P02549 DYNLL1P5-201ENST00000467158 270 ntBASIC1.36□□□□□ -2.19
SPTA1P02549 AC078918.1-201ENST00000498515 228 ntBASIC1.36□□□□□ -2.19
SPTA1P02549 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.36□□□□□ -2.19
SPTA1P02549 AL159169.2-201ENST00000610061 1269 ntBASIC1.36□□□□□ -2.19
SPTA1P02549 AC006329.2-201ENST00000611491 394 ntBASIC1.36□□□□□ -2.19
SPTA1P02549 AC011472.4-201ENST00000615848 491 ntBASIC1.36□□□□□ -2.19
SPTA1P02549 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC1.36□□□□□ -2.19
SPTA1P02549 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.36□□□□□ -2.19
SPTA1P02549 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.36□□□□□ -2.19
SPTA1P02549 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC1.36□□□□□ -2.19
SPTA1P02549 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC1.36□□□□□ -2.19
SPTA1P02549 VTRNA1-1-201ENST00000363120 99 ntBASIC1.36□□□□□ -2.19
SPTA1P02549 RNU6-716P-201ENST00000365621 103 ntBASIC1.36□□□□□ -2.19
SPTA1P02549 RPS12P24-201ENST00000412619 387 ntBASIC1.36□□□□□ -2.19
SPTA1P02549 EZH2P1-201ENST00000431167 291 ntBASIC1.36□□□□□ -2.19
SPTA1P02549 GTF2IP7-202ENST00000436677 309 ntBASIC1.36□□□□□ -2.19
SPTA1P02549 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.36□□□□□ -2.19
SPTA1P02549 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.36□□□□□ -2.19
SPTA1P02549 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.36□□□□□ -2.19
SPTA1P02549 AC013553.2-201ENST00000604244 589 ntBASIC1.36□□□□□ -2.19
SPTA1P02549 AC012493.3-201ENST00000604494 112 ntBASIC1.36□□□□□ -2.19
SPTA1P02549 AC034102.8-201ENST00000615146 484 ntBASIC1.36□□□□□ -2.19
SPTA1P02549 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.36□□□□□ -2.19
SPTA1P02549 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.35□□□□□ -2.19
SPTA1P02549 RNA5SP27-201ENST00000363839 119 ntBASIC1.35□□□□□ -2.19
SPTA1P02549 U3.15-201ENST00000365398 212 ntBASIC1.35□□□□□ -2.19
SPTA1P02549 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.35□□□□□ -2.19
SPTA1P02549 MTCYBP18-201ENST00000501056 747 ntBASIC1.35□□□□□ -2.19
SPTA1P02549 SETP7-201ENST00000552169 453 ntBASIC1.35□□□□□ -2.19
SPTA1P02549 RPL23AP78-201ENST00000599928 470 ntBASIC1.35□□□□□ -2.19
SPTA1P02549 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.35□□□□□ -2.19
SPTA1P02549 AP000553.5-201ENST00000641933 54 ntBASIC1.35□□□□□ -2.19
SPTA1P02549 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
SPTA1P02549 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
SPTA1P02549 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.35□□□□□ -2.19
SPTA1P02549 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms