Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.13□□□□□ -1.75
VPS4BO75351 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.13□□□□□ -1.75
VPS4BO75351 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.13□□□□□ -1.75
VPS4BO75351 AC006254.3-201ENST00000603353 884 ntBASIC4.13□□□□□ -1.75
VPS4BO75351 AC024220.1-201ENST00000603675 484 ntBASIC4.13□□□□□ -1.75
VPS4BO75351 AC010680.3-201ENST00000604215 520 ntBASIC4.13□□□□□ -1.75
VPS4BO75351 RNA5SP108-201ENST00000605921 117 ntBASIC4.13□□□□□ -1.75
VPS4BO75351 AC012603.1-201ENST00000606424 528 ntBASIC4.13□□□□□ -1.75
VPS4BO75351 AL158211.4-201ENST00000606988 584 ntBASIC4.13□□□□□ -1.75
VPS4BO75351 AC007546.1-201ENST00000619452 559 ntBASIC4.13□□□□□ -1.75
VPS4BO75351 AC112484.5-201ENST00000624189 228 ntBASIC4.13□□□□□ -1.75
VPS4BO75351 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
VPS4BO75351 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.13□□□□□ -1.75
VPS4BO75351 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.13□□□□□ -1.75
VPS4BO75351 AC116667.1-201ENST00000604855 2072 ntBASIC4.12□□□□□ -1.75
VPS4BO75351 AC068254.2-201ENST00000623938 3577 ntBASIC4.12□□□□□ -1.75
VPS4BO75351 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.12□□□□□ -1.75
VPS4BO75351 MAPK10-373ENST00000641983 6772 ntBASIC4.12□□□□□ -1.75
VPS4BO75351 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC4.12□□□□□ -1.75
VPS4BO75351 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
VPS4BO75351 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
VPS4BO75351 SNORD56.2-201ENST00000363242 71 ntBASIC4.12□□□□□ -1.75
VPS4BO75351 RNU6-525P-201ENST00000363685 104 ntBASIC4.12□□□□□ -1.75
VPS4BO75351 RNU6-263P-201ENST00000363811 107 ntBASIC4.12□□□□□ -1.75
VPS4BO75351 RNU6-39P-201ENST00000384344 107 ntBASIC4.12□□□□□ -1.75
VPS4BO75351 MIR558-201ENST00000384920 94 ntBASIC4.12□□□□□ -1.75
VPS4BO75351 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
VPS4BO75351 RNA5SP118-201ENST00000410385 109 ntBASIC4.12□□□□□ -1.75
VPS4BO75351 RNA5SP44-201ENST00000410446 133 ntBASIC4.12□□□□□ -1.75
VPS4BO75351 RNU2-41P-201ENST00000410991 178 ntBASIC4.12□□□□□ -1.75
VPS4BO75351 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.12□□□□□ -1.75
VPS4BO75351 BEND7P1-201ENST00000422058 457 ntBASIC4.12□□□□□ -1.75
VPS4BO75351 AL391219.1-201ENST00000422570 483 ntBASIC4.12□□□□□ -1.75
VPS4BO75351 ZNF863P-201ENST00000426746 417 ntBASIC4.12□□□□□ -1.75
VPS4BO75351 CKS1BP5-201ENST00000434172 273 ntBASIC4.12□□□□□ -1.75
VPS4BO75351 RPS20P5-201ENST00000434808 360 ntBASIC4.12□□□□□ -1.75
VPS4BO75351 SEPT14P3-201ENST00000439401 183 ntBASIC4.12□□□□□ -1.75
VPS4BO75351 AC005094.1-201ENST00000440420 368 ntBASIC4.12□□□□□ -1.75
VPS4BO75351 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC4.12□□□□□ -1.75
VPS4BO75351 AL732372.2-207ENST00000445840 183 ntBASIC4.12□□□□□ -1.75
VPS4BO75351 DDX3P2-201ENST00000446138 111 ntBASIC4.12□□□□□ -1.75
VPS4BO75351 AC140076.1-201ENST00000449897 361 ntBASIC4.12□□□□□ -1.75
VPS4BO75351 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.12□□□□□ -1.75
VPS4BO75351 SEPT14P2-201ENST00000453405 183 ntBASIC4.12□□□□□ -1.75
VPS4BO75351 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.12□□□□□ -1.75
VPS4BO75351 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.12□□□□□ -1.75
VPS4BO75351 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC4.12□□□□□ -1.75
VPS4BO75351 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.12□□□□□ -1.75
VPS4BO75351 AC041039.1-201ENST00000485656 536 ntBASIC4.12□□□□□ -1.75
VPS4BO75351 RPS26P15-201ENST00000488067 348 ntBASIC4.12□□□□□ -1.75
VPS4BO75351 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
VPS4BO75351 AC068305.1-201ENST00000497406 726 ntBASIC4.12□□□□□ -1.75
VPS4BO75351 AC135721.1-201ENST00000497954 479 ntBASIC4.12□□□□□ -1.75
VPS4BO75351 AC025554.1-201ENST00000505641 188 ntBASIC4.12□□□□□ -1.75
VPS4BO75351 SEPT14P4-201ENST00000513445 186 ntBASIC4.12□□□□□ -1.75
VPS4BO75351 RNA5SP143-201ENST00000516936 115 ntBASIC4.12□□□□□ -1.75
VPS4BO75351 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.12□□□□□ -1.75
VPS4BO75351 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.12□□□□□ -1.75
VPS4BO75351 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.12□□□□□ -1.75
VPS4BO75351 FO082796.1-201ENST00000523795 183 ntBASIC4.12□□□□□ -1.75
VPS4BO75351 AC135001.1-201ENST00000544546 283 ntBASIC4.12□□□□□ -1.75
VPS4BO75351 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC4.12□□□□□ -1.75
VPS4BO75351 NRBF2P5-201ENST00000603087 788 ntBASIC4.12□□□□□ -1.75
VPS4BO75351 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.12□□□□□ -1.75
VPS4BO75351 uc_338.13-201ENST00000618243 179 ntBASIC4.12□□□□□ -1.75
VPS4BO75351 YWHAEP7-203ENST00000622054 312 ntBASIC4.12□□□□□ -1.75
VPS4BO75351 MIR3662-201ENST00000637030 95 ntBASIC4.12□□□□□ -1.75
VPS4BO75351 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.12□□□□□ -1.75
VPS4BO75351 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
VPS4BO75351 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.12□□□□□ -1.75
VPS4BO75351 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
VPS4BO75351 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
VPS4BO75351 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.11□□□□□ -1.75
VPS4BO75351 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
VPS4BO75351 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.11□□□□□ -1.75
VPS4BO75351 AL645937.1-201ENST00000641739 1652 ntBASIC4.11□□□□□ -1.75
VPS4BO75351 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
VPS4BO75351 OR5P1P-201ENST00000299512 925 ntBASIC4.11□□□□□ -1.75
VPS4BO75351 SNORA70.4-201ENST00000365509 134 ntBASIC4.11□□□□□ -1.75
VPS4BO75351 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.11□□□□□ -1.75
VPS4BO75351 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
VPS4BO75351 SNORA69-201ENST00000383895 132 ntBASIC4.11□□□□□ -1.75
VPS4BO75351 RNU6-637P-201ENST00000384050 107 ntBASIC4.11□□□□□ -1.75
VPS4BO75351 RNU6-278P-201ENST00000390945 109 ntBASIC4.11□□□□□ -1.75
VPS4BO75351 RNU6-876P-201ENST00000391295 104 ntBASIC4.11□□□□□ -1.75
VPS4BO75351 RNU6-516P-201ENST00000411381 104 ntBASIC4.11□□□□□ -1.75
VPS4BO75351 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.11□□□□□ -1.75
VPS4BO75351 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.11□□□□□ -1.75
VPS4BO75351 AC012498.1-201ENST00000424037 437 ntBASIC4.11□□□□□ -1.75
VPS4BO75351 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC4.11□□□□□ -1.75
VPS4BO75351 MED13P1-201ENST00000428342 171 ntBASIC4.11□□□□□ -1.75
VPS4BO75351 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.11□□□□□ -1.75
VPS4BO75351 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.11□□□□□ -1.75
VPS4BO75351 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
VPS4BO75351 MTND4P25-201ENST00000441039 533 ntBASIC4.11□□□□□ -1.75
VPS4BO75351 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC4.11□□□□□ -1.75
VPS4BO75351 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.11□□□□□ -1.75
VPS4BO75351 AC007967.1-201ENST00000455422 1159 ntBASIC4.11□□□□□ -1.75
VPS4BO75351 RN7SL542P-201ENST00000467147 294 ntBASIC4.11□□□□□ -1.75
VPS4BO75351 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms