Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.79□□□□□ -1.96
NPHP4O75161 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.79□□□□□ -1.96
NPHP4O75161 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
NPHP4O75161 AC068781.1-201ENST00000488231 618 ntBASIC2.79□□□□□ -1.96
NPHP4O75161 AC117532.1-201ENST00000514638 323 ntBASIC2.79□□□□□ -1.96
NPHP4O75161 CASP1-212ENST00000531166 300 ntTSL 5 BASIC2.79□□□□□ -1.96
NPHP4O75161 AC004217.3-201ENST00000551552 878 ntBASIC2.79□□□□□ -1.96
NPHP4O75161 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.79□□□□□ -1.96
NPHP4O75161 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.79□□□□□ -1.96
NPHP4O75161 AC096586.1-201ENST00000610267 561 ntBASIC2.79□□□□□ -1.96
NPHP4O75161 U73479.1-201ENST00000618062 168 ntBASIC2.79□□□□□ -1.96
NPHP4O75161 AC084768.2-201ENST00000622736 221 ntBASIC2.79□□□□□ -1.96
NPHP4O75161 AP006248.3-201ENST00000623580 594 ntBASIC2.79□□□□□ -1.96
NPHP4O75161 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
NPHP4O75161 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.79□□□□□ -1.96
NPHP4O75161 ZNF271P-202ENST00000465539 1970 ntBASIC2.78□□□□□ -1.96
NPHP4O75161 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
NPHP4O75161 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
NPHP4O75161 Y_RNA.224-201ENST00000364308 111 ntBASIC2.78□□□□□ -1.96
NPHP4O75161 RNU1-138P-201ENST00000384093 164 ntBASIC2.78□□□□□ -1.96
NPHP4O75161 RNU6-1226P-201ENST00000384317 107 ntBASIC2.78□□□□□ -1.96
NPHP4O75161 SNORA51.12-201ENST00000384448 134 ntBASIC2.78□□□□□ -1.96
NPHP4O75161 U3.37-201ENST00000408528 213 ntBASIC2.78□□□□□ -1.96
NPHP4O75161 RPL31P2-201ENST00000413849 377 ntBASIC2.78□□□□□ -1.96
NPHP4O75161 MTCYBP24-201ENST00000420387 1106 ntBASIC2.78□□□□□ -1.96
NPHP4O75161 VN1R42P-201ENST00000424651 344 ntBASIC2.78□□□□□ -1.96
NPHP4O75161 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.78□□□□□ -1.96
NPHP4O75161 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC2.78□□□□□ -1.96
NPHP4O75161 HSPE1P28-201ENST00000443139 211 ntBASIC2.78□□□□□ -1.96
NPHP4O75161 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC2.78□□□□□ -1.96
NPHP4O75161 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC2.78□□□□□ -1.96
NPHP4O75161 AC104308.1-201ENST00000454621 333 ntBASIC2.78□□□□□ -1.96
NPHP4O75161 SYPL1P1-201ENST00000473622 768 ntBASIC2.78□□□□□ -1.96
NPHP4O75161 RNU6-1102P-201ENST00000516149 96 ntBASIC2.78□□□□□ -1.96
NPHP4O75161 RNU6-1073P-201ENST00000517182 106 ntBASIC2.78□□□□□ -1.96
NPHP4O75161 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC2.78□□□□□ -1.96
NPHP4O75161 AC100814.1-201ENST00000606963 623 ntBASIC2.78□□□□□ -1.96
NPHP4O75161 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.78□□□□□ -1.96
NPHP4O75161 SNORA7.2-201ENST00000364446 145 ntBASIC2.77□□□□□ -1.97
NPHP4O75161 Y_RNA.493-201ENST00000384422 102 ntBASIC2.77□□□□□ -1.97
NPHP4O75161 AL590084.1-201ENST00000407885 387 ntBASIC2.77□□□□□ -1.97
NPHP4O75161 RNA5SP181-201ENST00000410246 98 ntBASIC2.77□□□□□ -1.97
NPHP4O75161 UBE2V1P11-201ENST00000411559 285 ntBASIC2.77□□□□□ -1.97
NPHP4O75161 AL357078.2-201ENST00000416486 427 ntBASIC2.77□□□□□ -1.97
NPHP4O75161 AL096701.2-201ENST00000416920 238 ntBASIC2.77□□□□□ -1.97
NPHP4O75161 AC114973.1-201ENST00000429057 632 ntBASIC2.77□□□□□ -1.97
NPHP4O75161 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.77□□□□□ -1.97
NPHP4O75161 AC092798.1-201ENST00000458542 409 ntBASIC2.77□□□□□ -1.97
NPHP4O75161 AP000852.1-201ENST00000472460 573 ntBASIC2.77□□□□□ -1.97
NPHP4O75161 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
NPHP4O75161 AC011352.3-201ENST00000505162 593 ntBASIC2.77□□□□□ -1.97
NPHP4O75161 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.77□□□□□ -1.97
NPHP4O75161 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC2.77□□□□□ -1.97
NPHP4O75161 RPS3AP4-201ENST00000555161 764 ntBASIC2.77□□□□□ -1.97
NPHP4O75161 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC2.77□□□□□ -1.97
NPHP4O75161 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.77□□□□□ -1.97
NPHP4O75161 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.77□□□□□ -1.97
NPHP4O75161 AP001542.2-201ENST00000593141 364 ntBASIC2.77□□□□□ -1.97
NPHP4O75161 BNIP3P4-201ENST00000604946 565 ntBASIC2.77□□□□□ -1.97
NPHP4O75161 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.77□□□□□ -1.97
NPHP4O75161 MTND4P21-201ENST00000453886 1357 ntBASIC2.77□□□□□ -1.97
NPHP4O75161 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
NPHP4O75161 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
NPHP4O75161 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.76□□□□□ -1.97
NPHP4O75161 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC2.76□□□□□ -1.97
NPHP4O75161 RNU6-1151P-201ENST00000384684 107 ntBASIC2.76□□□□□ -1.97
NPHP4O75161 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
NPHP4O75161 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC2.76□□□□□ -1.97
NPHP4O75161 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.76□□□□□ -1.97
NPHP4O75161 RPL21P66-201ENST00000426566 466 ntBASIC2.76□□□□□ -1.97
NPHP4O75161 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC2.76□□□□□ -1.97
NPHP4O75161 AC129850.1-201ENST00000436203 508 ntBASIC2.76□□□□□ -1.97
NPHP4O75161 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.76□□□□□ -1.97
NPHP4O75161 HMGN2P16-201ENST00000456802 261 ntBASIC2.76□□□□□ -1.97
NPHP4O75161 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.76□□□□□ -1.97
NPHP4O75161 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.76□□□□□ -1.97
NPHP4O75161 MTND4LP22-201ENST00000508209 276 ntBASIC2.76□□□□□ -1.97
NPHP4O75161 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.76□□□□□ -1.97
NPHP4O75161 RNU6-362P-201ENST00000516736 90 ntBASIC2.76□□□□□ -1.97
NPHP4O75161 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.76□□□□□ -1.97
NPHP4O75161 AC026616.1-201ENST00000523157 525 ntBASIC2.76□□□□□ -1.97
NPHP4O75161 AC092470.1-201ENST00000546187 132 ntBASIC2.76□□□□□ -1.97
NPHP4O75161 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC2.76□□□□□ -1.97
NPHP4O75161 AL731537.2-201ENST00000561565 951 ntBASIC2.76□□□□□ -1.97
NPHP4O75161 AL020997.3-201ENST00000602843 359 ntBASIC2.76□□□□□ -1.97
NPHP4O75161 AC112503.2-201ENST00000609005 552 ntBASIC2.76□□□□□ -1.97
NPHP4O75161 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2.76□□□□□ -1.97
NPHP4O75161 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
NPHP4O75161 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.76□□□□□ -1.97
NPHP4O75161 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
NPHP4O75161 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
NPHP4O75161 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.76□□□□□ -1.97
NPHP4O75161 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
NPHP4O75161 MT-TC-201ENST00000387405 66 ntBASIC2.76□□□□□ -1.97
NPHP4O75161 RPL23AP47-201ENST00000408017 460 ntBASIC2.76□□□□□ -1.97
NPHP4O75161 USP9YP6-201ENST00000413550 854 ntBASIC2.76□□□□□ -1.97
NPHP4O75161 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.76□□□□□ -1.97
NPHP4O75161 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC2.76□□□□□ -1.97
NPHP4O75161 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.76□□□□□ -1.97
NPHP4O75161 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 129.3 ms