Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
SSSCA1O60232 RNA5SP387-201ENST00000364226 106 ntBASIC1.42□□□□□ -2.18
SSSCA1O60232 RNU6-167P-201ENST00000384292 106 ntBASIC1.42□□□□□ -2.18
SSSCA1O60232 AL079342.1-201ENST00000401460 267 ntBASIC1.42□□□□□ -2.18
SSSCA1O60232 SNORD56-201ENST00000413522 71 ntBASIC1.42□□□□□ -2.18
SSSCA1O60232 TRBV24OR9-2-201ENST00000416632 435 ntBASIC1.42□□□□□ -2.18
SSSCA1O60232 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC1.42□□□□□ -2.18
SSSCA1O60232 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.42□□□□□ -2.18
SSSCA1O60232 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC1.42□□□□□ -2.18
SSSCA1O60232 AL445685.2-201ENST00000422551 342 ntBASIC1.42□□□□□ -2.18
SSSCA1O60232 AL358075.3-201ENST00000426289 226 ntBASIC1.42□□□□□ -2.18
SSSCA1O60232 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.42□□□□□ -2.18
SSSCA1O60232 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
SSSCA1O60232 USP9YP15-201ENST00000442391 422 ntBASIC1.42□□□□□ -2.18
SSSCA1O60232 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.42□□□□□ -2.18
SSSCA1O60232 MTATP6P7-201ENST00000453315 681 ntBASIC1.42□□□□□ -2.18
SSSCA1O60232 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.42□□□□□ -2.18
SSSCA1O60232 RPL23AP42-201ENST00000471152 471 ntBASIC1.42□□□□□ -2.18
SSSCA1O60232 AC079203.1-201ENST00000487972 404 ntBASIC1.42□□□□□ -2.18
SSSCA1O60232 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC1.42□□□□□ -2.18
SSSCA1O60232 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC1.42□□□□□ -2.18
SSSCA1O60232 RPL9P6-201ENST00000492764 598 ntBASIC1.42□□□□□ -2.18
SSSCA1O60232 AC106872.3-201ENST00000495104 446 ntBASIC1.42□□□□□ -2.18
SSSCA1O60232 OR52A4P-203ENST00000498233 1014 ntBASIC1.42□□□□□ -2.18
SSSCA1O60232 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC1.42□□□□□ -2.18
SSSCA1O60232 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.42□□□□□ -2.18
SSSCA1O60232 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
SSSCA1O60232 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC1.42□□□□□ -2.18
SSSCA1O60232 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC1.42□□□□□ -2.18
SSSCA1O60232 COX6B1P6-201ENST00000522347 255 ntBASIC1.42□□□□□ -2.18
SSSCA1O60232 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
SSSCA1O60232 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC1.42□□□□□ -2.18
SSSCA1O60232 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC1.42□□□□□ -2.18
SSSCA1O60232 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC1.42□□□□□ -2.18
SSSCA1O60232 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.42□□□□□ -2.18
SSSCA1O60232 AC022662.1-201ENST00000580252 331 ntBASIC1.42□□□□□ -2.18
SSSCA1O60232 MIR3200-201ENST00000580767 85 ntBASIC1.42□□□□□ -2.18
SSSCA1O60232 AC011471.1-201ENST00000585766 187 ntBASIC1.42□□□□□ -2.18
SSSCA1O60232 AC010928.2-201ENST00000588017 287 ntBASIC1.42□□□□□ -2.18
SSSCA1O60232 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.42□□□□□ -2.18
SSSCA1O60232 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.42□□□□□ -2.18
SSSCA1O60232 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.42□□□□□ -2.18
SSSCA1O60232 AL392048.1-201ENST00000613946 534 ntBASIC1.42□□□□□ -2.18
SSSCA1O60232 AC109809.1-201ENST00000619665 545 ntBASIC1.42□□□□□ -2.18
SSSCA1O60232 AC116618.1-201ENST00000634617 774 ntBASIC1.42□□□□□ -2.18
SSSCA1O60232 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC1.41□□□□□ -2.18
SSSCA1O60232 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.41□□□□□ -2.18
SSSCA1O60232 Y_RNA.333-201ENST00000365274 102 ntBASIC1.41□□□□□ -2.18
SSSCA1O60232 RPS3AP24-201ENST00000407896 734 ntBASIC1.41□□□□□ -2.18
SSSCA1O60232 AL356867.1-201ENST00000429623 299 ntBASIC1.41□□□□□ -2.18
SSSCA1O60232 Z98742.2-201ENST00000431564 187 ntBASIC1.41□□□□□ -2.18
SSSCA1O60232 AC003989.2-201ENST00000440224 169 ntBASIC1.41□□□□□ -2.18
SSSCA1O60232 AC023512.1-201ENST00000444513 499 ntBASIC1.41□□□□□ -2.18
SSSCA1O60232 AC096638.1-201ENST00000444678 216 ntBASIC1.41□□□□□ -2.18
SSSCA1O60232 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC1.41□□□□□ -2.18
SSSCA1O60232 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.41□□□□□ -2.18
SSSCA1O60232 AC104629.2-201ENST00000468627 598 ntBASIC1.41□□□□□ -2.18
SSSCA1O60232 AC055731.1-201ENST00000474387 401 ntBASIC1.41□□□□□ -2.18
SSSCA1O60232 MRPS17P9-201ENST00000511924 393 ntBASIC1.41□□□□□ -2.18
SSSCA1O60232 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC1.41□□□□□ -2.18
SSSCA1O60232 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.41□□□□□ -2.18
SSSCA1O60232 AC074029.2-201ENST00000551045 634 ntBASIC1.41□□□□□ -2.18
SSSCA1O60232 MIR1273D-201ENST00000577266 86 ntBASIC1.41□□□□□ -2.18
SSSCA1O60232 MIR4287-201ENST00000579398 78 ntBASIC1.41□□□□□ -2.18
SSSCA1O60232 AC103710.4-201ENST00000609301 899 ntBASIC1.41□□□□□ -2.18
SSSCA1O60232 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC1.41□□□□□ -2.18
SSSCA1O60232 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.41□□□□□ -2.18
SSSCA1O60232 MIR7515-201ENST00000637837 67 ntBASIC1.41□□□□□ -2.18
SSSCA1O60232 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
SSSCA1O60232 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
SSSCA1O60232 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.4□□□□□ -2.19
SSSCA1O60232 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.4□□□□□ -2.19
SSSCA1O60232 RNU6-989P-201ENST00000362756 107 ntBASIC1.4□□□□□ -2.19
SSSCA1O60232 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.4□□□□□ -2.19
SSSCA1O60232 RNU6-1074P-201ENST00000383995 104 ntBASIC1.4□□□□□ -2.19
SSSCA1O60232 RNU6-31P-201ENST00000384388 108 ntBASIC1.4□□□□□ -2.19
SSSCA1O60232 CYCSP45-201ENST00000402289 315 ntBASIC1.4□□□□□ -2.19
SSSCA1O60232 HMGB3P31-201ENST00000413333 595 ntBASIC1.4□□□□□ -2.19
SSSCA1O60232 AL135786.1-201ENST00000415892 214 ntBASIC1.4□□□□□ -2.19
SSSCA1O60232 AL357078.2-201ENST00000416486 427 ntBASIC1.4□□□□□ -2.19
SSSCA1O60232 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.4□□□□□ -2.19
SSSCA1O60232 SEPT2P1-201ENST00000419651 180 ntBASIC1.4□□□□□ -2.19
SSSCA1O60232 XKRYP1-201ENST00000423438 492 ntBASIC1.4□□□□□ -2.19
SSSCA1O60232 AC006548.1-201ENST00000427470 102 ntBASIC1.4□□□□□ -2.19
SSSCA1O60232 USP12PX-201ENST00000432383 1057 ntBASIC1.4□□□□□ -2.19
SSSCA1O60232 XKRYP2-201ENST00000432915 492 ntBASIC1.4□□□□□ -2.19
SSSCA1O60232 YWHAZP8-201ENST00000436935 731 ntBASIC1.4□□□□□ -2.19
SSSCA1O60232 AC004866.2-201ENST00000438285 481 ntBASIC1.4□□□□□ -2.19
SSSCA1O60232 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC1.4□□□□□ -2.19
SSSCA1O60232 AL034418.1-201ENST00000448675 860 ntBASIC1.4□□□□□ -2.19
SSSCA1O60232 AC072039.1-201ENST00000477611 581 ntBASIC1.4□□□□□ -2.19
SSSCA1O60232 RPL7P18-201ENST00000478965 734 ntBASIC1.4□□□□□ -2.19
SSSCA1O60232 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.4□□□□□ -2.19
SSSCA1O60232 OR4G11P-201ENST00000492842 939 ntBASIC1.4□□□□□ -2.19
SSSCA1O60232 RPL38P4-201ENST00000502376 214 ntBASIC1.4□□□□□ -2.19
SSSCA1O60232 MTCYBP17-201ENST00000503579 789 ntBASIC1.4□□□□□ -2.19
SSSCA1O60232 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.4□□□□□ -2.19
SSSCA1O60232 AP005902.1-201ENST00000521358 186 ntBASIC1.4□□□□□ -2.19
SSSCA1O60232 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.4□□□□□ -2.19
SSSCA1O60232 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms