Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.78□□□□□ -1.8
SMAD6O43541 OR51AB1P-201ENST00000429046 620 ntBASIC3.78□□□□□ -1.8
SMAD6O43541 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.78□□□□□ -1.8
SMAD6O43541 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.78□□□□□ -1.8
SMAD6O43541 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SMAD6O43541 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.78□□□□□ -1.8
SMAD6O43541 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SMAD6O43541 BTF3P5-201ENST00000457252 467 ntBASIC3.78□□□□□ -1.8
SMAD6O43541 RNU7-170P-201ENST00000459303 61 ntBASIC3.78□□□□□ -1.8
SMAD6O43541 AC087312.1-201ENST00000471411 480 ntBASIC3.78□□□□□ -1.8
SMAD6O43541 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.78□□□□□ -1.8
SMAD6O43541 AL049830.2-201ENST00000480072 201 ntBASIC3.78□□□□□ -1.8
SMAD6O43541 RPS29P25-201ENST00000481709 171 ntBASIC3.78□□□□□ -1.8
SMAD6O43541 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.78□□□□□ -1.8
SMAD6O43541 KCTD9P5-201ENST00000504141 1170 ntBASIC3.78□□□□□ -1.8
SMAD6O43541 AC022447.3-201ENST00000506865 495 ntBASIC3.78□□□□□ -1.8
SMAD6O43541 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.78□□□□□ -1.8
SMAD6O43541 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.78□□□□□ -1.8
SMAD6O43541 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.78□□□□□ -1.8
SMAD6O43541 AC008011.1-201ENST00000545989 227 ntBASIC3.78□□□□□ -1.8
SMAD6O43541 AC090502.2-201ENST00000549267 280 ntBASIC3.78□□□□□ -1.8
SMAD6O43541 AL512360.1-201ENST00000555346 234 ntBASIC3.78□□□□□ -1.8
SMAD6O43541 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.78□□□□□ -1.8
SMAD6O43541 AC020914.4-201ENST00000597690 277 ntBASIC3.78□□□□□ -1.8
SMAD6O43541 AC078795.3-201ENST00000602913 472 ntBASIC3.78□□□□□ -1.8
SMAD6O43541 AC025449.1-201ENST00000603896 529 ntBASIC3.78□□□□□ -1.8
SMAD6O43541 AC007038.2-201ENST00000608095 740 ntBASIC3.78□□□□□ -1.8
SMAD6O43541 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SMAD6O43541 MIR486-1-201ENST00000612171 68 ntBASIC3.78□□□□□ -1.8
SMAD6O43541 AL391261.4-201ENST00000616012 481 ntBASIC3.78□□□□□ -1.8
SMAD6O43541 AC126177.8-201ENST00000618339 1015 ntBASIC3.78□□□□□ -1.8
SMAD6O43541 FER-210ENST00000628534 558 ntTSL 5 BASIC3.78□□□□□ -1.8
SMAD6O43541 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SMAD6O43541 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SMAD6O43541 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.78□□□□□ -1.8
SMAD6O43541 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SMAD6O43541 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.78□□□□□ -1.81
SMAD6O43541 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SMAD6O43541 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.77□□□□□ -1.81
SMAD6O43541 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SMAD6O43541 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
SMAD6O43541 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
SMAD6O43541 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SMAD6O43541 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SMAD6O43541 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
SMAD6O43541 Y_RNA.1-201ENST00000352915 104 ntBASIC3.77□□□□□ -1.81
SMAD6O43541 Y_RNA.263-201ENST00000364659 114 ntBASIC3.77□□□□□ -1.81
SMAD6O43541 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
SMAD6O43541 RNU6-877P-201ENST00000383868 107 ntBASIC3.77□□□□□ -1.81
SMAD6O43541 RNU6-483P-201ENST00000384088 108 ntBASIC3.77□□□□□ -1.81
SMAD6O43541 MIR670-201ENST00000390142 98 ntBASIC3.77□□□□□ -1.81
SMAD6O43541 RNA5SP424-201ENST00000390988 115 ntBASIC3.77□□□□□ -1.81
SMAD6O43541 MTHFD2P2-201ENST00000407725 247 ntBASIC3.77□□□□□ -1.81
SMAD6O43541 RNU2-28P-201ENST00000410457 189 ntBASIC3.77□□□□□ -1.81
SMAD6O43541 RPL31P2-201ENST00000413849 377 ntBASIC3.77□□□□□ -1.81
SMAD6O43541 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC3.77□□□□□ -1.81
SMAD6O43541 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.77□□□□□ -1.81
SMAD6O43541 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.77□□□□□ -1.81
SMAD6O43541 ISCA1P6-201ENST00000427740 390 ntBASIC3.77□□□□□ -1.81
SMAD6O43541 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.77□□□□□ -1.81
SMAD6O43541 AC091286.1-201ENST00000431233 461 ntBASIC3.77□□□□□ -1.81
SMAD6O43541 RPL37P1-201ENST00000432310 284 ntBASIC3.77□□□□□ -1.81
SMAD6O43541 FCF1P1-201ENST00000432690 571 ntBASIC3.77□□□□□ -1.81
SMAD6O43541 SKP1P1-201ENST00000438081 489 ntBASIC3.77□□□□□ -1.81
SMAD6O43541 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.77□□□□□ -1.81
SMAD6O43541 AL590399.6-201ENST00000446396 307 ntBASIC3.77□□□□□ -1.81
SMAD6O43541 OR6K1P-201ENST00000456766 971 ntBASIC3.77□□□□□ -1.81
SMAD6O43541 MTCO1P42-201ENST00000457379 726 ntBASIC3.77□□□□□ -1.81
SMAD6O43541 AC022034.3-201ENST00000471393 478 ntBASIC3.77□□□□□ -1.81
SMAD6O43541 AC023598.1-201ENST00000472521 361 ntBASIC3.77□□□□□ -1.81
SMAD6O43541 AC069499.1-201ENST00000489433 509 ntBASIC3.77□□□□□ -1.81
SMAD6O43541 TMEM248P1-201ENST00000510579 951 ntBASIC3.77□□□□□ -1.81
SMAD6O43541 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.77□□□□□ -1.81
SMAD6O43541 RNU6-1153P-201ENST00000516760 105 ntBASIC3.77□□□□□ -1.81
SMAD6O43541 RNU2-46P-201ENST00000517038 113 ntBASIC3.77□□□□□ -1.81
SMAD6O43541 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.77□□□□□ -1.81
SMAD6O43541 AP003467.2-201ENST00000520175 319 ntBASIC3.77□□□□□ -1.81
SMAD6O43541 SUMO2P20-201ENST00000520803 283 ntBASIC3.77□□□□□ -1.81
SMAD6O43541 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.77□□□□□ -1.81
SMAD6O43541 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.77□□□□□ -1.81
SMAD6O43541 AP003122.4-201ENST00000530980 758 ntBASIC3.77□□□□□ -1.81
SMAD6O43541 AC025678.1-201ENST00000567861 338 ntBASIC3.77□□□□□ -1.81
SMAD6O43541 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.77□□□□□ -1.81
SMAD6O43541 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.77□□□□□ -1.81
SMAD6O43541 AC007363.1-201ENST00000604736 620 ntBASIC3.77□□□□□ -1.81
SMAD6O43541 AL009028.1-201ENST00000604895 802 ntBASIC3.77□□□□□ -1.81
SMAD6O43541 BCRP9-201ENST00000605312 388 ntBASIC3.77□□□□□ -1.81
SMAD6O43541 AC064836.2-201ENST00000609491 462 ntBASIC3.77□□□□□ -1.81
SMAD6O43541 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.77□□□□□ -1.81
SMAD6O43541 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.77□□□□□ -1.81
SMAD6O43541 XIST_intron.1-201ENST00000619444 68 ntBASIC3.77□□□□□ -1.81
SMAD6O43541 AL136221.1-201ENST00000621449 509 ntBASIC3.77□□□□□ -1.81
SMAD6O43541 PISRT1-201ENST00000626175 531 ntBASIC3.77□□□□□ -1.81
SMAD6O43541 AL034408.1-202ENST00000636088 415 ntBASIC3.77□□□□□ -1.81
SMAD6O43541 MIR3662-201ENST00000637030 95 ntBASIC3.77□□□□□ -1.81
SMAD6O43541 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SMAD6O43541 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
SMAD6O43541 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.77□□□□□ -1.81
SMAD6O43541 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
SMAD6O43541 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms