Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 RNU6-1095P-201ENST00000516148 108 ntBASIC1.79□□□□□ -2.12
SDCBPO00560 RNA5SP471-201ENST00000516971 106 ntBASIC1.79□□□□□ -2.12
SDCBPO00560 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.79□□□□□ -2.12
SDCBPO00560 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC1.79□□□□□ -2.12
SDCBPO00560 AC095057.3-201ENST00000567102 1157 ntBASIC1.79□□□□□ -2.12
SDCBPO00560 AL136363.1-201ENST00000605349 337 ntBASIC1.79□□□□□ -2.12
SDCBPO00560 AL450270.1-201ENST00000606160 391 ntBASIC1.79□□□□□ -2.12
SDCBPO00560 MIR6840-201ENST00000611937 71 ntBASIC1.79□□□□□ -2.12
SDCBPO00560 RMST_10.1-201ENST00000616309 154 ntBASIC1.79□□□□□ -2.12
SDCBPO00560 AC079597.1-201ENST00000624306 508 ntBASIC1.79□□□□□ -2.12
SDCBPO00560 AC091925.2-201ENST00000625059 256 ntBASIC1.79□□□□□ -2.12
SDCBPO00560 IGHVIII-44-202ENST00000636235 289 ntBASIC1.79□□□□□ -2.12
SDCBPO00560 MFSD8-213ENST00000641134 1327 ntBASIC1.79□□□□□ -2.12
SDCBPO00560 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SDCBPO00560 NUP58P1-201ENST00000502546 1738 ntBASIC1.79□□□□□ -2.12
SDCBPO00560 AC010680.1-201ENST00000590024 3590 ntBASIC1.78□□□□□ -2.12
SDCBPO00560 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC1.78□□□□□ -2.12
SDCBPO00560 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC1.78□□□□□ -2.12
SDCBPO00560 OR56A5-201ENST00000340110 738 ntBASIC1.78□□□□□ -2.12
SDCBPO00560 ANKRD36P1-201ENST00000344424 659 ntBASIC1.78□□□□□ -2.12
SDCBPO00560 RNU4-52P-201ENST00000384209 138 ntBASIC1.78□□□□□ -2.12
SDCBPO00560 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
SDCBPO00560 SNORA11.4-201ENST00000408823 129 ntBASIC1.78□□□□□ -2.12
SDCBPO00560 UBE2V1P11-201ENST00000411559 285 ntBASIC1.78□□□□□ -2.12
SDCBPO00560 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC1.78□□□□□ -2.12
SDCBPO00560 ACTR3BP6-201ENST00000422332 1241 ntBASIC1.78□□□□□ -2.12
SDCBPO00560 MTCO3P30-201ENST00000426425 670 ntBASIC1.78□□□□□ -2.12
SDCBPO00560 AL365496.1-201ENST00000426885 215 ntBASIC1.78□□□□□ -2.12
SDCBPO00560 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
SDCBPO00560 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
SDCBPO00560 AC092573.2-201ENST00000434546 243 ntBASIC1.78□□□□□ -2.12
SDCBPO00560 MTND4LP10-201ENST00000435146 291 ntBASIC1.78□□□□□ -2.12
SDCBPO00560 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC1.78□□□□□ -2.12
SDCBPO00560 AL118520.1-201ENST00000450770 291 ntBASIC1.78□□□□□ -2.12
SDCBPO00560 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.78□□□□□ -2.12
SDCBPO00560 MTND3P4-201ENST00000453537 303 ntBASIC1.78□□□□□ -2.12
SDCBPO00560 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.78□□□□□ -2.12
SDCBPO00560 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.78□□□□□ -2.12
SDCBPO00560 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC1.78□□□□□ -2.12
SDCBPO00560 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.78□□□□□ -2.12
SDCBPO00560 RPS15AP34-201ENST00000487776 387 ntBASIC1.78□□□□□ -2.12
SDCBPO00560 AC079804.2-201ENST00000490376 200 ntBASIC1.78□□□□□ -2.12
SDCBPO00560 AC098799.1-201ENST00000504752 800 ntBASIC1.78□□□□□ -2.12
SDCBPO00560 AC114322.1-201ENST00000506771 926 ntBASIC1.78□□□□□ -2.12
SDCBPO00560 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC1.78□□□□□ -2.12
SDCBPO00560 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC1.78□□□□□ -2.12
SDCBPO00560 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
SDCBPO00560 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC1.78□□□□□ -2.12
SDCBPO00560 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC1.78□□□□□ -2.12
SDCBPO00560 AC090888.1-201ENST00000561335 1141 ntBASIC1.78□□□□□ -2.12
SDCBPO00560 AC106734.1-201ENST00000568646 663 ntBASIC1.78□□□□□ -2.12
SDCBPO00560 SNORD53-201ENST00000579969 78 ntBASIC1.78□□□□□ -2.12
SDCBPO00560 OR4K7P-201ENST00000580232 945 ntBASIC1.78□□□□□ -2.12
SDCBPO00560 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.78□□□□□ -2.12
SDCBPO00560 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
SDCBPO00560 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC1.78□□□□□ -2.12
SDCBPO00560 AC006213.5-201ENST00000619673 288 ntBASIC1.78□□□□□ -2.12
SDCBPO00560 AL162233.1-201ENST00000620014 944 ntBASIC1.78□□□□□ -2.12
SDCBPO00560 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.78□□□□□ -2.12
SDCBPO00560 AC093591.3-201ENST00000634516 308 ntBASIC1.78□□□□□ -2.12
SDCBPO00560 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.78□□□□□ -2.12
SDCBPO00560 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.78□□□□□ -2.12
SDCBPO00560 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
SDCBPO00560 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC1.77□□□□□ -2.13
SDCBPO00560 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.77□□□□□ -2.13
SDCBPO00560 RNU6-198P-201ENST00000384258 104 ntBASIC1.77□□□□□ -2.13
SDCBPO00560 UBE2V1P2-201ENST00000397758 440 ntBASIC1.77□□□□□ -2.13
SDCBPO00560 AL445183.3-201ENST00000414168 502 ntBASIC1.77□□□□□ -2.13
SDCBPO00560 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.77□□□□□ -2.13
SDCBPO00560 VN1R42P-201ENST00000424651 344 ntBASIC1.77□□□□□ -2.13
SDCBPO00560 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC1.77□□□□□ -2.13
SDCBPO00560 EZH2P1-201ENST00000431167 291 ntBASIC1.77□□□□□ -2.13
SDCBPO00560 TRIM60P13-201ENST00000432350 1283 ntBASIC1.77□□□□□ -2.13
SDCBPO00560 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
SDCBPO00560 RNFT1P2-201ENST00000443064 757 ntBASIC1.77□□□□□ -2.13
SDCBPO00560 WASF1P1-201ENST00000447560 1131 ntBASIC1.77□□□□□ -2.13
SDCBPO00560 AL589880.1-201ENST00000448271 287 ntBASIC1.77□□□□□ -2.13
SDCBPO00560 EEF1B2P7-201ENST00000451177 676 ntBASIC1.77□□□□□ -2.13
SDCBPO00560 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.77□□□□□ -2.13
SDCBPO00560 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.77□□□□□ -2.13
SDCBPO00560 RPL31P41-201ENST00000477967 372 ntBASIC1.77□□□□□ -2.13
SDCBPO00560 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC1.77□□□□□ -2.13
SDCBPO00560 AC093767.1-201ENST00000504523 156 ntBASIC1.77□□□□□ -2.13
SDCBPO00560 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC1.77□□□□□ -2.13
SDCBPO00560 AC025768.1-201ENST00000510057 267 ntBASIC1.77□□□□□ -2.13
SDCBPO00560 AC109471.1-201ENST00000511631 612 ntBASIC1.77□□□□□ -2.13
SDCBPO00560 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC1.77□□□□□ -2.13
SDCBPO00560 SCARNA16.3-201ENST00000516595 184 ntBASIC1.77□□□□□ -2.13
SDCBPO00560 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC1.77□□□□□ -2.13
SDCBPO00560 MIR4672-201ENST00000583126 81 ntBASIC1.77□□□□□ -2.13
SDCBPO00560 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC1.77□□□□□ -2.13
SDCBPO00560 AF131215.7-201ENST00000602443 707 ntBASIC1.77□□□□□ -2.13
SDCBPO00560 AC079089.3-201ENST00000603094 673 ntBASIC1.77□□□□□ -2.13
SDCBPO00560 AC009314.1-201ENST00000603871 304 ntBASIC1.77□□□□□ -2.13
SDCBPO00560 AC055876.5-201ENST00000605667 259 ntBASIC1.77□□□□□ -2.13
SDCBPO00560 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.77□□□□□ -2.13
SDCBPO00560 AC112503.2-201ENST00000609005 552 ntBASIC1.77□□□□□ -2.13
SDCBPO00560 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC1.77□□□□□ -2.13
SDCBPO00560 MIR203B-201ENST00000636080 86 ntBASIC1.77□□□□□ -2.13
SDCBPO00560 AC087359.1-201ENST00000508335 1740 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms