Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 FAM172BP-201ENST00000487497 1089 ntBASIC1.46□□□□□ -2.18
HMGN4O00479 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
HMGN4O00479 FAM92A1P2-202ENST00000504766 877 ntBASIC1.46□□□□□ -2.18
HMGN4O00479 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC1.46□□□□□ -2.18
HMGN4O00479 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC1.46□□□□□ -2.18
HMGN4O00479 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC1.46□□□□□ -2.18
HMGN4O00479 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.46□□□□□ -2.18
HMGN4O00479 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC1.46□□□□□ -2.18
HMGN4O00479 AC126177.3-201ENST00000551839 688 ntBASIC1.46□□□□□ -2.18
HMGN4O00479 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.46□□□□□ -2.18
HMGN4O00479 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.46□□□□□ -2.18
HMGN4O00479 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC1.46□□□□□ -2.18
HMGN4O00479 uc_338.5-201ENST00000611839 155 ntBASIC1.46□□□□□ -2.18
HMGN4O00479 AC009090.3-201ENST00000616553 565 ntBASIC1.46□□□□□ -2.18
HMGN4O00479 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
HMGN4O00479 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC1.46□□□□□ -2.18
HMGN4O00479 MIR203B-201ENST00000636080 86 ntBASIC1.46□□□□□ -2.18
HMGN4O00479 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.46□□□□□ -2.18
HMGN4O00479 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.46□□□□□ -2.18
HMGN4O00479 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
HMGN4O00479 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
HMGN4O00479 RNU6-837P-201ENST00000391056 108 ntBASIC1.45□□□□□ -2.18
HMGN4O00479 SNORA26.9-201ENST00000391322 122 ntBASIC1.45□□□□□ -2.18
HMGN4O00479 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
HMGN4O00479 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.45□□□□□ -2.18
HMGN4O00479 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC1.45□□□□□ -2.18
HMGN4O00479 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.45□□□□□ -2.18
HMGN4O00479 MRPS33P4-201ENST00000434892 317 ntBASIC1.45□□□□□ -2.18
HMGN4O00479 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC1.45□□□□□ -2.18
HMGN4O00479 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC1.45□□□□□ -2.18
HMGN4O00479 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.45□□□□□ -2.18
HMGN4O00479 AL139109.1-201ENST00000455491 297 ntBASIC1.45□□□□□ -2.18
HMGN4O00479 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.45□□□□□ -2.18
HMGN4O00479 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.45□□□□□ -2.18
HMGN4O00479 AC078857.1-201ENST00000469870 667 ntBASIC1.45□□□□□ -2.18
HMGN4O00479 AL135752.1-201ENST00000479477 471 ntBASIC1.45□□□□□ -2.18
HMGN4O00479 OR5BM1P-201ENST00000512021 366 ntBASIC1.45□□□□□ -2.18
HMGN4O00479 SNORA25.15-201ENST00000516487 89 ntBASIC1.45□□□□□ -2.18
HMGN4O00479 EEF1A1P37-201ENST00000522748 715 ntBASIC1.45□□□□□ -2.18
HMGN4O00479 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC1.45□□□□□ -2.18
HMGN4O00479 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.45□□□□□ -2.18
HMGN4O00479 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.45□□□□□ -2.18
HMGN4O00479 EIF5A2P1-201ENST00000564027 460 ntBASIC1.45□□□□□ -2.18
HMGN4O00479 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.45□□□□□ -2.18
HMGN4O00479 MIR548Y-201ENST00000582739 110 ntBASIC1.45□□□□□ -2.18
HMGN4O00479 AC010928.2-201ENST00000588017 287 ntBASIC1.45□□□□□ -2.18
HMGN4O00479 OR1M4P-201ENST00000589199 287 ntBASIC1.45□□□□□ -2.18
HMGN4O00479 AL136363.1-201ENST00000605349 337 ntBASIC1.45□□□□□ -2.18
HMGN4O00479 VN1R9P-201ENST00000614184 867 ntBASIC1.45□□□□□ -2.18
HMGN4O00479 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.45□□□□□ -2.18
HMGN4O00479 AC009902.3-201ENST00000606235 2172 ntBASIC1.45□□□□□ -2.18
HMGN4O00479 AL355497.1-201ENST00000406262 551 ntBASIC1.44□□□□□ -2.18
HMGN4O00479 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.44□□□□□ -2.18
HMGN4O00479 Z85995.1-201ENST00000415547 335 ntBASIC1.44□□□□□ -2.18
HMGN4O00479 RPS3AP9-201ENST00000417027 792 ntBASIC1.44□□□□□ -2.18
HMGN4O00479 AL356320.2-201ENST00000417263 507 ntBASIC1.44□□□□□ -2.18
HMGN4O00479 BX276092.3-201ENST00000424182 230 ntBASIC1.44□□□□□ -2.18
HMGN4O00479 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.44□□□□□ -2.18
HMGN4O00479 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.44□□□□□ -2.18
HMGN4O00479 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC1.44□□□□□ -2.18
HMGN4O00479 AL445687.1-201ENST00000439946 251 ntBASIC1.44□□□□□ -2.18
HMGN4O00479 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC1.44□□□□□ -2.18
HMGN4O00479 AC007677.1-201ENST00000445757 515 ntBASIC1.44□□□□□ -2.18
HMGN4O00479 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.44□□□□□ -2.18
HMGN4O00479 AMD1P1-201ENST00000457220 922 ntBASIC1.44□□□□□ -2.18
HMGN4O00479 SNORD121B-201ENST00000458838 81 ntBASIC1.44□□□□□ -2.18
HMGN4O00479 RNU6-1004P-201ENST00000516584 111 ntBASIC1.44□□□□□ -2.18
HMGN4O00479 RNU2-44P-201ENST00000516795 194 ntBASIC1.44□□□□□ -2.18
HMGN4O00479 ATP5F1P5-201ENST00000526403 760 ntBASIC1.44□□□□□ -2.18
HMGN4O00479 AP000916.1-201ENST00000533869 835 ntBASIC1.44□□□□□ -2.18
HMGN4O00479 MIR3683-201ENST00000580847 82 ntBASIC1.44□□□□□ -2.18
HMGN4O00479 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.44□□□□□ -2.18
HMGN4O00479 AC068880.5-201ENST00000624331 290 ntBASIC1.44□□□□□ -2.18
HMGN4O00479 AL356118.1-201ENST00000635272 1078 ntBASIC1.44□□□□□ -2.18
HMGN4O00479 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC1.44□□□□□ -2.18
HMGN4O00479 AC022336.2-201ENST00000568966 2538 ntBASIC1.43□□□□□ -2.18
HMGN4O00479 SGO1P2-201ENST00000429458 1589 ntBASIC1.43□□□□□ -2.18
HMGN4O00479 AL359893.1-201ENST00000447628 1580 ntBASIC1.43□□□□□ -2.18
HMGN4O00479 AC009812.4-201ENST00000569134 1805 ntBASIC1.43□□□□□ -2.18
HMGN4O00479 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
HMGN4O00479 AL354685.2-201ENST00000448218 1447 ntBASIC1.43□□□□□ -2.18
HMGN4O00479 MTCO1P4-201ENST00000520516 1409 ntBASIC1.43□□□□□ -2.18
HMGN4O00479 AC004944.1-201ENST00000517807 3059 ntBASIC1.43□□□□□ -2.18
HMGN4O00479 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
HMGN4O00479 MIR320A-201ENST00000385302 82 ntBASIC1.43□□□□□ -2.18
HMGN4O00479 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC1.43□□□□□ -2.18
HMGN4O00479 AL512504.1-201ENST00000415494 778 ntBASIC1.43□□□□□ -2.18
HMGN4O00479 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.43□□□□□ -2.18
HMGN4O00479 CYCSP49-201ENST00000420810 319 ntBASIC1.43□□□□□ -2.18
HMGN4O00479 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.43□□□□□ -2.18
HMGN4O00479 AL445669.1-201ENST00000426743 755 ntBASIC1.43□□□□□ -2.18
HMGN4O00479 AL512661.1-201ENST00000434586 1253 ntBASIC1.43□□□□□ -2.18
HMGN4O00479 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.43□□□□□ -2.18
HMGN4O00479 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.43□□□□□ -2.18
HMGN4O00479 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.43□□□□□ -2.18
HMGN4O00479 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC1.43□□□□□ -2.18
HMGN4O00479 snoU13.15-201ENST00000459407 104 ntBASIC1.43□□□□□ -2.18
HMGN4O00479 RPS27P21-201ENST00000486977 252 ntBASIC1.43□□□□□ -2.18
HMGN4O00479 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.43□□□□□ -2.18
HMGN4O00479 AC116337.1-201ENST00000509680 687 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms