Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 OR1S2-201ENST00000302592 978 ntBASIC2.21□□□□□ -2.06
SMKR1H3BMG3 SNORD67-201ENST00000390833 111 ntBASIC2.21□□□□□ -2.06
SMKR1H3BMG3 TAF9BP1-201ENST00000396646 746 ntBASIC2.21□□□□□ -2.06
SMKR1H3BMG3 AL512633.1-201ENST00000399931 655 ntBASIC2.21□□□□□ -2.06
SMKR1H3BMG3 RNU4-22P-201ENST00000411058 166 ntBASIC2.21□□□□□ -2.06
SMKR1H3BMG3 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.21□□□□□ -2.06
SMKR1H3BMG3 AL451074.5-201ENST00000415894 435 ntBASIC2.21□□□□□ -2.06
SMKR1H3BMG3 UBE2FP1-201ENST00000416536 447 ntBASIC2.21□□□□□ -2.06
SMKR1H3BMG3 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.21□□□□□ -2.06
SMKR1H3BMG3 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.21□□□□□ -2.06
SMKR1H3BMG3 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.21□□□□□ -2.06
SMKR1H3BMG3 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.21□□□□□ -2.06
SMKR1H3BMG3 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.21□□□□□ -2.06
SMKR1H3BMG3 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
SMKR1H3BMG3 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.21□□□□□ -2.06
SMKR1H3BMG3 TRIM60P9Y-201ENST00000438459 816 ntBASIC2.21□□□□□ -2.06
SMKR1H3BMG3 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC2.21□□□□□ -2.06
SMKR1H3BMG3 COX6CP2-201ENST00000444980 225 ntBASIC2.21□□□□□ -2.06
SMKR1H3BMG3 TRIM60P11Y-201ENST00000445313 801 ntBASIC2.21□□□□□ -2.06
SMKR1H3BMG3 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.21□□□□□ -2.06
SMKR1H3BMG3 ZNF736P4Y-201ENST00000454995 1243 ntBASIC2.21□□□□□ -2.06
SMKR1H3BMG3 MTATP6P14-201ENST00000455189 673 ntBASIC2.21□□□□□ -2.06
SMKR1H3BMG3 snoU109.3-201ENST00000459477 145 ntBASIC2.21□□□□□ -2.06
SMKR1H3BMG3 AC005410.1-202ENST00000460347 485 ntBASIC2.21□□□□□ -2.06
SMKR1H3BMG3 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.21□□□□□ -2.06
SMKR1H3BMG3 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.21□□□□□ -2.06
SMKR1H3BMG3 MTCYBP23-201ENST00000558717 1102 ntBASIC2.21□□□□□ -2.06
SMKR1H3BMG3 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.21□□□□□ -2.06
SMKR1H3BMG3 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.21□□□□□ -2.06
SMKR1H3BMG3 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.21□□□□□ -2.06
SMKR1H3BMG3 AF038458.1-201ENST00000588406 262 ntBASIC2.21□□□□□ -2.06
SMKR1H3BMG3 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.21□□□□□ -2.06
SMKR1H3BMG3 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.21□□□□□ -2.06
SMKR1H3BMG3 MTND3P19-201ENST00000603825 345 ntBASIC2.21□□□□□ -2.06
SMKR1H3BMG3 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC2.21□□□□□ -2.06
SMKR1H3BMG3 AC069234.5-201ENST00000611056 416 ntBASIC2.21□□□□□ -2.06
SMKR1H3BMG3 AC107871.2-201ENST00000612894 502 ntBASIC2.21□□□□□ -2.06
SMKR1H3BMG3 AC008498.1-201ENST00000613012 531 ntBASIC2.21□□□□□ -2.06
SMKR1H3BMG3 AC006338.2-201ENST00000616864 791 ntBASIC2.21□□□□□ -2.06
SMKR1H3BMG3 AC006386.1-201ENST00000619436 415 ntBASIC2.21□□□□□ -2.06
SMKR1H3BMG3 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
SMKR1H3BMG3 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.21□□□□□ -2.06
SMKR1H3BMG3 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
SMKR1H3BMG3 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
SMKR1H3BMG3 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.2□□□□□ -2.06
SMKR1H3BMG3 RNU6-461P-201ENST00000364195 107 ntBASIC2.2□□□□□ -2.06
SMKR1H3BMG3 RNU6-777P-201ENST00000364265 104 ntBASIC2.2□□□□□ -2.06
SMKR1H3BMG3 CGA-201ENST00000369582 729 ntTSL 5 BASIC2.2□□□□□ -2.06
SMKR1H3BMG3 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
SMKR1H3BMG3 MIR181A2-201ENST00000384863 110 ntBASIC2.2□□□□□ -2.06
SMKR1H3BMG3 MIR888-201ENST00000401186 77 ntBASIC2.2□□□□□ -2.06
SMKR1H3BMG3 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.2□□□□□ -2.06
SMKR1H3BMG3 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC2.2□□□□□ -2.06
SMKR1H3BMG3 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.2□□□□□ -2.06
SMKR1H3BMG3 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC2.2□□□□□ -2.06
SMKR1H3BMG3 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC2.2□□□□□ -2.06
SMKR1H3BMG3 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.2□□□□□ -2.06
SMKR1H3BMG3 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.2□□□□□ -2.06
SMKR1H3BMG3 OR10R1P-201ENST00000441524 1141 ntBASIC2.2□□□□□ -2.06
SMKR1H3BMG3 NOTCH2P1-201ENST00000443481 624 ntBASIC2.2□□□□□ -2.06
SMKR1H3BMG3 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.2□□□□□ -2.06
SMKR1H3BMG3 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.2□□□□□ -2.06
SMKR1H3BMG3 RBMY2UP-201ENST00000453474 324 ntBASIC2.2□□□□□ -2.06
SMKR1H3BMG3 RPL12P25-201ENST00000455592 494 ntBASIC2.2□□□□□ -2.06
SMKR1H3BMG3 RPL36AP51-201ENST00000487216 318 ntBASIC2.2□□□□□ -2.06
SMKR1H3BMG3 RPS15AP34-201ENST00000487776 387 ntBASIC2.2□□□□□ -2.06
SMKR1H3BMG3 AL160314.1-201ENST00000490836 438 ntBASIC2.2□□□□□ -2.06
SMKR1H3BMG3 RPS15AP36-201ENST00000492022 382 ntBASIC2.2□□□□□ -2.06
SMKR1H3BMG3 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
SMKR1H3BMG3 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.2□□□□□ -2.06
SMKR1H3BMG3 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.2□□□□□ -2.06
SMKR1H3BMG3 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.2□□□□□ -2.06
SMKR1H3BMG3 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC2.2□□□□□ -2.06
SMKR1H3BMG3 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.2□□□□□ -2.06
SMKR1H3BMG3 COX6CP5-201ENST00000527162 228 ntBASIC2.2□□□□□ -2.06
SMKR1H3BMG3 RPL21P12-201ENST00000559810 515 ntBASIC2.2□□□□□ -2.06
SMKR1H3BMG3 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.2□□□□□ -2.06
SMKR1H3BMG3 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.2□□□□□ -2.06
SMKR1H3BMG3 AC023813.2-201ENST00000564321 469 ntBASIC2.2□□□□□ -2.06
SMKR1H3BMG3 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.2□□□□□ -2.06
SMKR1H3BMG3 AC023043.3-201ENST00000593113 385 ntBASIC2.2□□□□□ -2.06
SMKR1H3BMG3 NRBF2P5-201ENST00000603087 788 ntBASIC2.2□□□□□ -2.06
SMKR1H3BMG3 AL357094.1-201ENST00000603845 844 ntBASIC2.2□□□□□ -2.06
SMKR1H3BMG3 MTND4LP5-201ENST00000605152 292 ntBASIC2.2□□□□□ -2.06
SMKR1H3BMG3 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.2□□□□□ -2.06
SMKR1H3BMG3 AC239868.4-201ENST00000608318 671 ntBASIC2.2□□□□□ -2.06
SMKR1H3BMG3 AL121652.1-201ENST00000608851 448 ntBASIC2.2□□□□□ -2.06
SMKR1H3BMG3 AL133445.2-201ENST00000611191 527 ntBASIC2.2□□□□□ -2.06
SMKR1H3BMG3 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.2□□□□□ -2.06
SMKR1H3BMG3 UGP2-231ENST00000627474 264 ntTSL 5 BASIC2.2□□□□□ -2.06
SMKR1H3BMG3 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SMKR1H3BMG3 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
SMKR1H3BMG3 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
SMKR1H3BMG3 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
SMKR1H3BMG3 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
SMKR1H3BMG3 ZNF285B-201ENST00000561698 1767 ntBASIC2.19□□□□□ -2.06
SMKR1H3BMG3 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.19□□□□□ -2.06
SMKR1H3BMG3 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
SMKR1H3BMG3 RNU6-884P-201ENST00000363889 107 ntBASIC2.19□□□□□ -2.06
SMKR1H3BMG3 RNU4-68P-201ENST00000364314 141 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms