Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 HMGB1P36-201ENST00000487709 576 ntBASIC3.1□□□□□ -1.91
NEDD8-MDP1E9PL57 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.1□□□□□ -1.91
NEDD8-MDP1E9PL57 AC104685.1-201ENST00000502445 371 ntBASIC3.1□□□□□ -1.91
NEDD8-MDP1E9PL57 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.1□□□□□ -1.91
NEDD8-MDP1E9PL57 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
NEDD8-MDP1E9PL57 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.1□□□□□ -1.91
NEDD8-MDP1E9PL57 RNA5SP217-201ENST00000515959 91 ntBASIC3.1□□□□□ -1.91
NEDD8-MDP1E9PL57 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.1□□□□□ -1.91
NEDD8-MDP1E9PL57 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC3.1□□□□□ -1.91
NEDD8-MDP1E9PL57 AC239860.2-201ENST00000525886 270 ntBASIC3.1□□□□□ -1.91
NEDD8-MDP1E9PL57 AC012182.1-201ENST00000570133 895 ntBASIC3.1□□□□□ -1.91
NEDD8-MDP1E9PL57 ISCA1P3-201ENST00000577104 373 ntBASIC3.1□□□□□ -1.91
NEDD8-MDP1E9PL57 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.1□□□□□ -1.91
NEDD8-MDP1E9PL57 AL353997.4-201ENST00000586196 166 ntBASIC3.1□□□□□ -1.91
NEDD8-MDP1E9PL57 AC006504.3-201ENST00000586818 523 ntBASIC3.1□□□□□ -1.91
NEDD8-MDP1E9PL57 AC011468.4-201ENST00000603942 409 ntBASIC3.1□□□□□ -1.91
NEDD8-MDP1E9PL57 AC018638.7-201ENST00000605836 1114 ntBASIC3.1□□□□□ -1.91
NEDD8-MDP1E9PL57 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.1□□□□□ -1.91
NEDD8-MDP1E9PL57 AL590282.1-201ENST00000610379 1136 ntBASIC3.1□□□□□ -1.91
NEDD8-MDP1E9PL57 AC120349.3-201ENST00000624377 529 ntBASIC3.1□□□□□ -1.91
NEDD8-MDP1E9PL57 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NEDD8-MDP1E9PL57 AC004925.1-201ENST00000624256 2706 ntBASIC3.1□□□□□ -1.91
NEDD8-MDP1E9PL57 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
NEDD8-MDP1E9PL57 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
NEDD8-MDP1E9PL57 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
NEDD8-MDP1E9PL57 RPL21P132-201ENST00000331267 462 ntBASIC3.09□□□□□ -1.91
NEDD8-MDP1E9PL57 RNU6-600P-201ENST00000362524 99 ntBASIC3.09□□□□□ -1.91
NEDD8-MDP1E9PL57 RNA5SP383-201ENST00000362934 120 ntBASIC3.09□□□□□ -1.91
NEDD8-MDP1E9PL57 RNU6-1155P-201ENST00000363554 107 ntBASIC3.09□□□□□ -1.91
NEDD8-MDP1E9PL57 AL590084.2-201ENST00000401481 382 ntBASIC3.09□□□□□ -1.91
NEDD8-MDP1E9PL57 RNA5SP107-201ENST00000411358 122 ntBASIC3.09□□□□□ -1.91
NEDD8-MDP1E9PL57 AC107081.1-201ENST00000414975 361 ntBASIC3.09□□□□□ -1.91
NEDD8-MDP1E9PL57 RPL32P35-201ENST00000415214 394 ntBASIC3.09□□□□□ -1.91
NEDD8-MDP1E9PL57 AC245291.1-201ENST00000419501 328 ntBASIC3.09□□□□□ -1.91
NEDD8-MDP1E9PL57 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.09□□□□□ -1.91
NEDD8-MDP1E9PL57 AC079780.1-201ENST00000428259 207 ntBASIC3.09□□□□□ -1.91
NEDD8-MDP1E9PL57 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.09□□□□□ -1.91
NEDD8-MDP1E9PL57 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.09□□□□□ -1.91
NEDD8-MDP1E9PL57 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.09□□□□□ -1.91
NEDD8-MDP1E9PL57 MTND5P2-201ENST00000442927 1142 ntBASIC3.09□□□□□ -1.91
NEDD8-MDP1E9PL57 RPL7P52-201ENST00000449200 742 ntBASIC3.09□□□□□ -1.91
NEDD8-MDP1E9PL57 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.09□□□□□ -1.91
NEDD8-MDP1E9PL57 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC3.09□□□□□ -1.91
NEDD8-MDP1E9PL57 RPL23AP35-201ENST00000451906 501 ntBASIC3.09□□□□□ -1.91
NEDD8-MDP1E9PL57 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.09□□□□□ -1.91
NEDD8-MDP1E9PL57 MTCO2P6-201ENST00000463134 685 ntBASIC3.09□□□□□ -1.91
NEDD8-MDP1E9PL57 RPS29P26-201ENST00000477483 171 ntBASIC3.09□□□□□ -1.91
NEDD8-MDP1E9PL57 AC068587.2-201ENST00000478386 781 ntBASIC3.09□□□□□ -1.91
NEDD8-MDP1E9PL57 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.09□□□□□ -1.91
NEDD8-MDP1E9PL57 RNU1-143P-201ENST00000516296 146 ntBASIC3.09□□□□□ -1.91
NEDD8-MDP1E9PL57 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.09□□□□□ -1.91
NEDD8-MDP1E9PL57 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.09□□□□□ -1.91
NEDD8-MDP1E9PL57 AC002400.1-201ENST00000569310 726 ntBASIC3.09□□□□□ -1.91
NEDD8-MDP1E9PL57 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.09□□□□□ -1.91
NEDD8-MDP1E9PL57 RNU6-88P-201ENST00000606801 100 ntBASIC3.09□□□□□ -1.91
NEDD8-MDP1E9PL57 AL360219.1-201ENST00000610230 366 ntBASIC3.09□□□□□ -1.91
NEDD8-MDP1E9PL57 U1.23-201ENST00000610293 146 ntBASIC3.09□□□□□ -1.91
NEDD8-MDP1E9PL57 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.09□□□□□ -1.91
NEDD8-MDP1E9PL57 RNU1-68P-201ENST00000615382 146 ntBASIC3.09□□□□□ -1.91
NEDD8-MDP1E9PL57 U1.39-201ENST00000621562 146 ntBASIC3.09□□□□□ -1.91
NEDD8-MDP1E9PL57 AC131159.1-201ENST00000621854 213 ntBASIC3.09□□□□□ -1.91
NEDD8-MDP1E9PL57 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.09□□□□□ -1.91
NEDD8-MDP1E9PL57 AL356596.1-201ENST00000624230 379 ntBASIC3.09□□□□□ -1.91
NEDD8-MDP1E9PL57 AC009039.2-201ENST00000624524 529 ntBASIC3.09□□□□□ -1.91
NEDD8-MDP1E9PL57 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.09□□□□□ -1.91
NEDD8-MDP1E9PL57 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.09□□□□□ -1.91
NEDD8-MDP1E9PL57 AC007256.1-201ENST00000392253 2765 ntBASIC3.08□□□□□ -1.92
NEDD8-MDP1E9PL57 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
NEDD8-MDP1E9PL57 AC073325.2-201ENST00000339545 159 ntBASIC3.08□□□□□ -1.92
NEDD8-MDP1E9PL57 Y_RNA.234-201ENST00000364409 97 ntBASIC3.08□□□□□ -1.92
NEDD8-MDP1E9PL57 RNU6-723P-201ENST00000383973 107 ntBASIC3.08□□□□□ -1.92
NEDD8-MDP1E9PL57 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.08□□□□□ -1.92
NEDD8-MDP1E9PL57 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
NEDD8-MDP1E9PL57 HMGB3P23-201ENST00000414981 585 ntBASIC3.08□□□□□ -1.92
NEDD8-MDP1E9PL57 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.08□□□□□ -1.92
NEDD8-MDP1E9PL57 VDAC1P3-201ENST00000434069 851 ntBASIC3.08□□□□□ -1.92
NEDD8-MDP1E9PL57 SNRPEP7-201ENST00000438350 220 ntBASIC3.08□□□□□ -1.92
NEDD8-MDP1E9PL57 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC3.08□□□□□ -1.92
NEDD8-MDP1E9PL57 AC098826.2-201ENST00000452011 651 ntBASIC3.08□□□□□ -1.92
NEDD8-MDP1E9PL57 OR6C5P-201ENST00000452388 923 ntBASIC3.08□□□□□ -1.92
NEDD8-MDP1E9PL57 HMGB1P15-201ENST00000453854 435 ntBASIC3.08□□□□□ -1.92
NEDD8-MDP1E9PL57 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.08□□□□□ -1.92
NEDD8-MDP1E9PL57 ST13P14-201ENST00000474095 734 ntBASIC3.08□□□□□ -1.92
NEDD8-MDP1E9PL57 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.08□□□□□ -1.92
NEDD8-MDP1E9PL57 AC017037.2-201ENST00000513850 890 ntBASIC3.08□□□□□ -1.92
NEDD8-MDP1E9PL57 AC026801.2-201ENST00000515352 425 ntBASIC3.08□□□□□ -1.92
NEDD8-MDP1E9PL57 RNU6-1073P-201ENST00000517182 106 ntBASIC3.08□□□□□ -1.92
NEDD8-MDP1E9PL57 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.08□□□□□ -1.92
NEDD8-MDP1E9PL57 CR383656.7-201ENST00000548164 174 ntBASIC3.08□□□□□ -1.92
NEDD8-MDP1E9PL57 AC090615.1-201ENST00000577519 154 ntBASIC3.08□□□□□ -1.92
NEDD8-MDP1E9PL57 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC3.08□□□□□ -1.92
NEDD8-MDP1E9PL57 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.08□□□□□ -1.92
NEDD8-MDP1E9PL57 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.08□□□□□ -1.92
NEDD8-MDP1E9PL57 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.08□□□□□ -1.92
NEDD8-MDP1E9PL57 BBIP1P1-201ENST00000602999 279 ntBASIC3.08□□□□□ -1.92
NEDD8-MDP1E9PL57 AP000811.1-201ENST00000603803 651 ntBASIC3.08□□□□□ -1.92
NEDD8-MDP1E9PL57 AC090186.1-201ENST00000605991 572 ntBASIC3.08□□□□□ -1.92
NEDD8-MDP1E9PL57 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.08□□□□□ -1.92
NEDD8-MDP1E9PL57 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.08□□□□□ -1.92
NEDD8-MDP1E9PL57 AL031667.3-201ENST00000620124 655 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms