Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.22□□□□□ -1.89
TRIM49BA6NDI0 AL451074.5-201ENST00000415894 435 ntBASIC3.22□□□□□ -1.89
TRIM49BA6NDI0 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.22□□□□□ -1.89
TRIM49BA6NDI0 AC012498.1-201ENST00000424037 437 ntBASIC3.22□□□□□ -1.89
TRIM49BA6NDI0 MTATP6P4-201ENST00000427725 675 ntBASIC3.22□□□□□ -1.89
TRIM49BA6NDI0 MUPP-201ENST00000438111 566 ntBASIC3.22□□□□□ -1.89
TRIM49BA6NDI0 USP9YP22-201ENST00000438971 294 ntBASIC3.22□□□□□ -1.89
TRIM49BA6NDI0 AC140076.1-201ENST00000449897 361 ntBASIC3.22□□□□□ -1.89
TRIM49BA6NDI0 USP9YP34-201ENST00000453983 808 ntBASIC3.22□□□□□ -1.89
TRIM49BA6NDI0 Z82190.1-201ENST00000454534 490 ntBASIC3.22□□□□□ -1.89
TRIM49BA6NDI0 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC3.22□□□□□ -1.89
TRIM49BA6NDI0 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.22□□□□□ -1.89
TRIM49BA6NDI0 RN7SL807P-201ENST00000470923 297 ntBASIC3.22□□□□□ -1.89
TRIM49BA6NDI0 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.22□□□□□ -1.89
TRIM49BA6NDI0 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.22□□□□□ -1.89
TRIM49BA6NDI0 AC147055.4-201ENST00000504399 745 ntBASIC3.22□□□□□ -1.89
TRIM49BA6NDI0 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.22□□□□□ -1.89
TRIM49BA6NDI0 AC010265.1-201ENST00000513509 211 ntBASIC3.22□□□□□ -1.89
TRIM49BA6NDI0 SNORA31.1-201ENST00000515993 133 ntBASIC3.22□□□□□ -1.89
TRIM49BA6NDI0 SNORA31.5-201ENST00000516190 133 ntBASIC3.22□□□□□ -1.89
TRIM49BA6NDI0 RNU6-1261P-201ENST00000517194 104 ntBASIC3.22□□□□□ -1.89
TRIM49BA6NDI0 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.22□□□□□ -1.89
TRIM49BA6NDI0 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.22□□□□□ -1.89
TRIM49BA6NDI0 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.22□□□□□ -1.89
TRIM49BA6NDI0 OR4T1P-201ENST00000554933 911 ntBASIC3.22□□□□□ -1.89
TRIM49BA6NDI0 AC034105.3-201ENST00000565294 442 ntBASIC3.22□□□□□ -1.89
TRIM49BA6NDI0 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC3.22□□□□□ -1.89
TRIM49BA6NDI0 BNIP3P26-201ENST00000600827 554 ntBASIC3.22□□□□□ -1.89
TRIM49BA6NDI0 AC097065.2-201ENST00000608159 533 ntBASIC3.22□□□□□ -1.89
TRIM49BA6NDI0 AC097478.2-201ENST00000610572 514 ntBASIC3.22□□□□□ -1.89
TRIM49BA6NDI0 AC099778.2-201ENST00000610904 211 ntBASIC3.22□□□□□ -1.89
TRIM49BA6NDI0 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.22□□□□□ -1.89
TRIM49BA6NDI0 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.22□□□□□ -1.89
TRIM49BA6NDI0 U6.101-201ENST00000637707 76 ntBASIC3.22□□□□□ -1.89
TRIM49BA6NDI0 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
TRIM49BA6NDI0 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.22□□□□□ -1.89
TRIM49BA6NDI0 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
TRIM49BA6NDI0 AC103988.1-201ENST00000566382 2177 ntBASIC3.22□□□□□ -1.89
TRIM49BA6NDI0 GABRG2-229ENST00000641017 3628 ntBASIC3.22□□□□□ -1.89
TRIM49BA6NDI0 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
TRIM49BA6NDI0 OR5BR1P-201ENST00000524992 1330 ntBASIC3.21□□□□□ -1.89
TRIM49BA6NDI0 MAPK10-362ENST00000641864 4484 ntBASIC3.21□□□□□ -1.89
TRIM49BA6NDI0 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
TRIM49BA6NDI0 RNU1-35P-201ENST00000362782 153 ntBASIC3.21□□□□□ -1.9
TRIM49BA6NDI0 RNU6-1155P-201ENST00000363554 107 ntBASIC3.21□□□□□ -1.9
TRIM49BA6NDI0 SNORA71.1-201ENST00000364523 117 ntBASIC3.21□□□□□ -1.9
TRIM49BA6NDI0 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TRIM49BA6NDI0 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
TRIM49BA6NDI0 SNORD116-8-201ENST00000384365 95 ntBASIC3.21□□□□□ -1.9
TRIM49BA6NDI0 RNY3P9-201ENST00000384727 106 ntBASIC3.21□□□□□ -1.9
TRIM49BA6NDI0 AL590084.2-201ENST00000401481 382 ntBASIC3.21□□□□□ -1.9
TRIM49BA6NDI0 AL136372.1-201ENST00000403060 228 ntBASIC3.21□□□□□ -1.9
TRIM49BA6NDI0 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.21□□□□□ -1.9
TRIM49BA6NDI0 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TRIM49BA6NDI0 RNU4-72P-201ENST00000410754 173 ntBASIC3.21□□□□□ -1.9
TRIM49BA6NDI0 RN7SKP58-201ENST00000411010 305 ntBASIC3.21□□□□□ -1.9
TRIM49BA6NDI0 Z92545.1-201ENST00000411782 234 ntBASIC3.21□□□□□ -1.9
TRIM49BA6NDI0 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.21□□□□□ -1.9
TRIM49BA6NDI0 RPL7P30-201ENST00000420888 709 ntBASIC3.21□□□□□ -1.9
TRIM49BA6NDI0 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.21□□□□□ -1.9
TRIM49BA6NDI0 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.21□□□□□ -1.9
TRIM49BA6NDI0 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.21□□□□□ -1.9
TRIM49BA6NDI0 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.21□□□□□ -1.9
TRIM49BA6NDI0 AL117351.1-201ENST00000438864 766 ntBASIC3.21□□□□□ -1.9
TRIM49BA6NDI0 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.21□□□□□ -1.9
TRIM49BA6NDI0 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.21□□□□□ -1.9
TRIM49BA6NDI0 RPS27AP8-201ENST00000452665 445 ntBASIC3.21□□□□□ -1.9
TRIM49BA6NDI0 ANKRD26P4-201ENST00000455755 950 ntBASIC3.21□□□□□ -1.9
TRIM49BA6NDI0 MTND1P16-201ENST00000465177 898 ntBASIC3.21□□□□□ -1.9
TRIM49BA6NDI0 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.21□□□□□ -1.9
TRIM49BA6NDI0 RPL7P18-201ENST00000478965 734 ntBASIC3.21□□□□□ -1.9
TRIM49BA6NDI0 OR2A20P-203ENST00000498397 1268 ntBASIC3.21□□□□□ -1.9
TRIM49BA6NDI0 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.21□□□□□ -1.9
TRIM49BA6NDI0 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.21□□□□□ -1.9
TRIM49BA6NDI0 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.21□□□□□ -1.9
TRIM49BA6NDI0 AP003461.1-201ENST00000528866 78 ntBASIC3.21□□□□□ -1.9
TRIM49BA6NDI0 ELOCP32-201ENST00000548625 324 ntBASIC3.21□□□□□ -1.9
TRIM49BA6NDI0 AC087465.1-201ENST00000560574 245 ntBASIC3.21□□□□□ -1.9
TRIM49BA6NDI0 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.21□□□□□ -1.9
TRIM49BA6NDI0 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.21□□□□□ -1.9
TRIM49BA6NDI0 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.21□□□□□ -1.9
TRIM49BA6NDI0 AC006539.2-201ENST00000601729 572 ntBASIC3.21□□□□□ -1.9
TRIM49BA6NDI0 AC012119.1-201ENST00000603184 222 ntBASIC3.21□□□□□ -1.9
TRIM49BA6NDI0 BNIP3P11-201ENST00000603878 563 ntBASIC3.21□□□□□ -1.9
TRIM49BA6NDI0 AL022099.1-201ENST00000604551 712 ntBASIC3.21□□□□□ -1.9
TRIM49BA6NDI0 AL031176.1-201ENST00000604554 466 ntBASIC3.21□□□□□ -1.9
TRIM49BA6NDI0 AC005000.2-201ENST00000605468 310 ntBASIC3.21□□□□□ -1.9
TRIM49BA6NDI0 AC012443.1-201ENST00000605605 231 ntBASIC3.21□□□□□ -1.9
TRIM49BA6NDI0 AC245008.1-201ENST00000608123 476 ntBASIC3.21□□□□□ -1.9
TRIM49BA6NDI0 AP002826.1-201ENST00000608835 315 ntBASIC3.21□□□□□ -1.9
TRIM49BA6NDI0 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.21□□□□□ -1.9
TRIM49BA6NDI0 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.21□□□□□ -1.9
TRIM49BA6NDI0 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.21□□□□□ -1.9
TRIM49BA6NDI0 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
TRIM49BA6NDI0 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.2□□□□□ -1.9
TRIM49BA6NDI0 OR4G11P-202ENST00000642116 1414 ntBASIC3.2□□□□□ -1.9
TRIM49BA6NDI0 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
TRIM49BA6NDI0 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
TRIM49BA6NDI0 SNORA1.3-201ENST00000384676 136 ntBASIC3.2□□□□□ -1.9
TRIM49BA6NDI0 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 156.4 ms