Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC4.23□□□□□ -1.73
PCDHA3Q9Y5H8 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.23□□□□□ -1.73
PCDHA3Q9Y5H8 MTND1P35-201ENST00000526739 508 ntBASIC4.23□□□□□ -1.73
PCDHA3Q9Y5H8 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.23□□□□□ -1.73
PCDHA3Q9Y5H8 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC4.23□□□□□ -1.73
PCDHA3Q9Y5H8 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.23□□□□□ -1.73
PCDHA3Q9Y5H8 AC025627.2-201ENST00000576220 160 ntBASIC4.23□□□□□ -1.73
PCDHA3Q9Y5H8 MIR548S-201ENST00000581352 82 ntBASIC4.23□□□□□ -1.73
PCDHA3Q9Y5H8 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.23□□□□□ -1.73
PCDHA3Q9Y5H8 AL162413.1-201ENST00000603198 110 ntBASIC4.23□□□□□ -1.73
PCDHA3Q9Y5H8 AL356218.2-201ENST00000605264 187 ntBASIC4.23□□□□□ -1.73
PCDHA3Q9Y5H8 TUG1_2.1-201ENST00000614234 87 ntBASIC4.23□□□□□ -1.73
PCDHA3Q9Y5H8 AL450472.3-201ENST00000615578 367 ntBASIC4.23□□□□□ -1.73
PCDHA3Q9Y5H8 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.23□□□□□ -1.73
PCDHA3Q9Y5H8 AL353748.2-201ENST00000622148 471 ntBASIC4.23□□□□□ -1.73
PCDHA3Q9Y5H8 MIR4275-201ENST00000636486 87 ntBASIC4.23□□□□□ -1.73
PCDHA3Q9Y5H8 AC099654.14-201ENST00000638599 341 ntBASIC4.23□□□□□ -1.73
PCDHA3Q9Y5H8 ZNF680P1-201ENST00000436625 1469 ntBASIC4.23□□□□□ -1.73
PCDHA3Q9Y5H8 IPO8P1-201ENST00000455509 3109 ntBASIC4.23□□□□□ -1.73
PCDHA3Q9Y5H8 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PCDHA3Q9Y5H8 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PCDHA3Q9Y5H8 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.23□□□□□ -1.73
PCDHA3Q9Y5H8 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PCDHA3Q9Y5H8 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.22□□□□□ -1.73
PCDHA3Q9Y5H8 LINC02471-203ENST00000641941 4752 ntBASIC4.22□□□□□ -1.73
PCDHA3Q9Y5H8 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PCDHA3Q9Y5H8 SNORA60-201ENST00000362396 134 ntBASIC4.22□□□□□ -1.73
PCDHA3Q9Y5H8 Y_RNA.22-201ENST00000362492 102 ntBASIC4.22□□□□□ -1.73
PCDHA3Q9Y5H8 RNU6-1284P-201ENST00000363701 100 ntBASIC4.22□□□□□ -1.73
PCDHA3Q9Y5H8 RNA5SP509-201ENST00000364577 119 ntBASIC4.22□□□□□ -1.73
PCDHA3Q9Y5H8 Y_RNA.295-201ENST00000364918 102 ntBASIC4.22□□□□□ -1.73
PCDHA3Q9Y5H8 RNU1-89P-201ENST00000384592 164 ntBASIC4.22□□□□□ -1.73
PCDHA3Q9Y5H8 RNU6-606P-201ENST00000384721 111 ntBASIC4.22□□□□□ -1.73
PCDHA3Q9Y5H8 MIR1-2-201ENST00000384961 85 ntBASIC4.22□□□□□ -1.73
PCDHA3Q9Y5H8 RNU6-908P-201ENST00000410160 94 ntBASIC4.22□□□□□ -1.73
PCDHA3Q9Y5H8 RN7SKP159-201ENST00000410657 292 ntBASIC4.22□□□□□ -1.73
PCDHA3Q9Y5H8 RAB28P1-201ENST00000411517 641 ntBASIC4.22□□□□□ -1.73
PCDHA3Q9Y5H8 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PCDHA3Q9Y5H8 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.22□□□□□ -1.73
PCDHA3Q9Y5H8 C4BPAP2-201ENST00000428434 478 ntBASIC4.22□□□□□ -1.73
PCDHA3Q9Y5H8 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.22□□□□□ -1.73
PCDHA3Q9Y5H8 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.22□□□□□ -1.73
PCDHA3Q9Y5H8 AC090774.1-201ENST00000435925 246 ntBASIC4.22□□□□□ -1.73
PCDHA3Q9Y5H8 HMGB1P31-201ENST00000437242 427 ntBASIC4.22□□□□□ -1.73
PCDHA3Q9Y5H8 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.22□□□□□ -1.73
PCDHA3Q9Y5H8 DDX3P2-201ENST00000446138 111 ntBASIC4.22□□□□□ -1.73
PCDHA3Q9Y5H8 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.22□□□□□ -1.73
PCDHA3Q9Y5H8 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC4.22□□□□□ -1.73
PCDHA3Q9Y5H8 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.22□□□□□ -1.73
PCDHA3Q9Y5H8 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.22□□□□□ -1.73
PCDHA3Q9Y5H8 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC4.22□□□□□ -1.73
PCDHA3Q9Y5H8 RNU6-420P-201ENST00000458780 107 ntBASIC4.22□□□□□ -1.73
PCDHA3Q9Y5H8 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.22□□□□□ -1.73
PCDHA3Q9Y5H8 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.22□□□□□ -1.73
PCDHA3Q9Y5H8 BTF3L4P4-201ENST00000506381 449 ntBASIC4.22□□□□□ -1.73
PCDHA3Q9Y5H8 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PCDHA3Q9Y5H8 AC074344.1-201ENST00000512823 224 ntBASIC4.22□□□□□ -1.73
PCDHA3Q9Y5H8 SNORD27.1-201ENST00000516319 72 ntBASIC4.22□□□□□ -1.73
PCDHA3Q9Y5H8 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.22□□□□□ -1.73
PCDHA3Q9Y5H8 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.22□□□□□ -1.73
PCDHA3Q9Y5H8 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC4.22□□□□□ -1.73
PCDHA3Q9Y5H8 FAM60DP-201ENST00000524174 632 ntBASIC4.22□□□□□ -1.73
PCDHA3Q9Y5H8 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.22□□□□□ -1.73
PCDHA3Q9Y5H8 BNIP3P5-201ENST00000562290 498 ntBASIC4.22□□□□□ -1.73
PCDHA3Q9Y5H8 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.22□□□□□ -1.73
PCDHA3Q9Y5H8 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
PCDHA3Q9Y5H8 AC008752.3-201ENST00000588113 712 ntBASIC4.22□□□□□ -1.73
PCDHA3Q9Y5H8 AC004825.2-201ENST00000616634 455 ntBASIC4.22□□□□□ -1.73
PCDHA3Q9Y5H8 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC4.22□□□□□ -1.73
PCDHA3Q9Y5H8 FRG1KP-201ENST00000623592 341 ntBASIC4.22□□□□□ -1.73
PCDHA3Q9Y5H8 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.22□□□□□ -1.73
PCDHA3Q9Y5H8 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.22□□□□□ -1.73
PCDHA3Q9Y5H8 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PCDHA3Q9Y5H8 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.22□□□□□ -1.73
PCDHA3Q9Y5H8 UBE3AP2-201ENST00000429033 2259 ntBASIC4.21□□□□□ -1.73
PCDHA3Q9Y5H8 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.21□□□□□ -1.74
PCDHA3Q9Y5H8 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PCDHA3Q9Y5H8 Y_RNA.390-201ENST00000383932 102 ntBASIC4.21□□□□□ -1.74
PCDHA3Q9Y5H8 MIR3074-201ENST00000384885 81 ntBASIC4.21□□□□□ -1.74
PCDHA3Q9Y5H8 RNU6-882P-201ENST00000391025 103 ntBASIC4.21□□□□□ -1.74
PCDHA3Q9Y5H8 RNU6-1158P-201ENST00000391167 107 ntBASIC4.21□□□□□ -1.74
PCDHA3Q9Y5H8 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PCDHA3Q9Y5H8 MIR1251-201ENST00000408552 70 ntBASIC4.21□□□□□ -1.74
PCDHA3Q9Y5H8 RPL21P24-201ENST00000413752 448 ntBASIC4.21□□□□□ -1.74
PCDHA3Q9Y5H8 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDHA3Q9Y5H8 UBE2FP1-201ENST00000416536 447 ntBASIC4.21□□□□□ -1.74
PCDHA3Q9Y5H8 MTCO3P12-201ENST00000416718 547 ntBASIC4.21□□□□□ -1.74
PCDHA3Q9Y5H8 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.21□□□□□ -1.74
PCDHA3Q9Y5H8 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.21□□□□□ -1.74
PCDHA3Q9Y5H8 AC004866.2-201ENST00000438285 481 ntBASIC4.21□□□□□ -1.74
PCDHA3Q9Y5H8 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.21□□□□□ -1.74
PCDHA3Q9Y5H8 AL356010.1-201ENST00000456364 102 ntBASIC4.21□□□□□ -1.74
PCDHA3Q9Y5H8 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.21□□□□□ -1.74
PCDHA3Q9Y5H8 SNORD97-201ENST00000459187 142 ntBASIC4.21□□□□□ -1.74
PCDHA3Q9Y5H8 RNU6-261P-201ENST00000459506 102 ntBASIC4.21□□□□□ -1.74
PCDHA3Q9Y5H8 AC007537.2-201ENST00000472093 511 ntBASIC4.21□□□□□ -1.74
PCDHA3Q9Y5H8 RPS27AP1-201ENST00000475545 471 ntBASIC4.21□□□□□ -1.74
PCDHA3Q9Y5H8 RPS29P25-201ENST00000481709 171 ntBASIC4.21□□□□□ -1.74
PCDHA3Q9Y5H8 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDHA3Q9Y5H8 OR5BN1P-201ENST00000532955 829 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 131.7 ms