Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 MIR9-3-201ENST00000385084 90 ntBASIC1.55□□□□□ -2.16
AP4S1Q9Y587 RNU6-837P-201ENST00000391056 108 ntBASIC1.55□□□□□ -2.16
AP4S1Q9Y587 AC068050.1-201ENST00000394891 380 ntBASIC1.55□□□□□ -2.16
AP4S1Q9Y587 AC019129.1-201ENST00000403786 261 ntBASIC1.55□□□□□ -2.16
AP4S1Q9Y587 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.55□□□□□ -2.16
AP4S1Q9Y587 AC007560.1-201ENST00000426912 237 ntBASIC1.55□□□□□ -2.16
AP4S1Q9Y587 ARF4P4-201ENST00000439608 520 ntBASIC1.55□□□□□ -2.16
AP4S1Q9Y587 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.55□□□□□ -2.16
AP4S1Q9Y587 AC004022.1-201ENST00000447766 1066 ntBASIC1.55□□□□□ -2.16
AP4S1Q9Y587 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
AP4S1Q9Y587 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC1.55□□□□□ -2.16
AP4S1Q9Y587 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.55□□□□□ -2.16
AP4S1Q9Y587 AL359385.1-201ENST00000456509 365 ntBASIC1.55□□□□□ -2.16
AP4S1Q9Y587 CABYRP1-201ENST00000465493 1045 ntBASIC1.55□□□□□ -2.16
AP4S1Q9Y587 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.55□□□□□ -2.16
AP4S1Q9Y587 IGKV2-36-201ENST00000519999 223 ntBASIC1.55□□□□□ -2.16
AP4S1Q9Y587 AC084851.1-201ENST00000529105 249 ntBASIC1.55□□□□□ -2.16
AP4S1Q9Y587 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC1.55□□□□□ -2.16
AP4S1Q9Y587 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.55□□□□□ -2.16
AP4S1Q9Y587 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.55□□□□□ -2.16
AP4S1Q9Y587 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.55□□□□□ -2.16
AP4S1Q9Y587 AC106900.2-201ENST00000604994 317 ntBASIC1.55□□□□□ -2.16
AP4S1Q9Y587 AL627230.6-201ENST00000611129 280 ntBASIC1.55□□□□□ -2.16
AP4S1Q9Y587 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
AP4S1Q9Y587 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
AP4S1Q9Y587 RN7SKP226-201ENST00000364912 300 ntBASIC1.54□□□□□ -2.16
AP4S1Q9Y587 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC1.54□□□□□ -2.16
AP4S1Q9Y587 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
AP4S1Q9Y587 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC1.54□□□□□ -2.16
AP4S1Q9Y587 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.54□□□□□ -2.16
AP4S1Q9Y587 AC093155.1-201ENST00000440164 826 ntBASIC1.54□□□□□ -2.16
AP4S1Q9Y587 ANXA2P1-201ENST00000505539 926 ntBASIC1.54□□□□□ -2.16
AP4S1Q9Y587 MRPS17P9-201ENST00000511924 393 ntBASIC1.54□□□□□ -2.16
AP4S1Q9Y587 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC1.54□□□□□ -2.16
AP4S1Q9Y587 IGKV2D-36-201ENST00000518643 226 ntBASIC1.54□□□□□ -2.16
AP4S1Q9Y587 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.54□□□□□ -2.16
AP4S1Q9Y587 AC022880.1-201ENST00000534017 973 ntBASIC1.54□□□□□ -2.16
AP4S1Q9Y587 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.54□□□□□ -2.16
AP4S1Q9Y587 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.54□□□□□ -2.16
AP4S1Q9Y587 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.54□□□□□ -2.16
AP4S1Q9Y587 RPAP2P1-201ENST00000603626 1168 ntBASIC1.54□□□□□ -2.16
AP4S1Q9Y587 AP001330.4-201ENST00000604350 154 ntBASIC1.54□□□□□ -2.16
AP4S1Q9Y587 uc_338.5-201ENST00000611839 155 ntBASIC1.54□□□□□ -2.16
AP4S1Q9Y587 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
AP4S1Q9Y587 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC1.54□□□□□ -2.16
AP4S1Q9Y587 AL356118.1-201ENST00000635272 1078 ntBASIC1.54□□□□□ -2.16
AP4S1Q9Y587 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC1.54□□□□□ -2.16
AP4S1Q9Y587 BX649567.1-201ENST00000642071 1134 ntBASIC1.54□□□□□ -2.16
AP4S1Q9Y587 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC1.54□□□□□ -2.16
AP4S1Q9Y587 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
AP4S1Q9Y587 AP000648.3-201ENST00000623539 4507 ntBASIC1.54□□□□□ -2.16
AP4S1Q9Y587 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
AP4S1Q9Y587 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.54□□□□□ -2.16
AP4S1Q9Y587 ADAM3A-203ENST00000461344 2157 ntBASIC1.54□□□□□ -2.16
AP4S1Q9Y587 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.53□□□□□ -2.16
AP4S1Q9Y587 RNU4-78P-201ENST00000410940 126 ntBASIC1.53□□□□□ -2.16
AP4S1Q9Y587 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC1.53□□□□□ -2.16
AP4S1Q9Y587 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC1.53□□□□□ -2.16
AP4S1Q9Y587 CR848007.1-201ENST00000442354 1699 ntBASIC1.53□□□□□ -2.16
AP4S1Q9Y587 RPS26P30-201ENST00000443431 335 ntBASIC1.53□□□□□ -2.16
AP4S1Q9Y587 WASF1P1-201ENST00000447560 1131 ntBASIC1.53□□□□□ -2.16
AP4S1Q9Y587 AC128713.1-201ENST00000471495 306 ntBASIC1.53□□□□□ -2.16
AP4S1Q9Y587 AC133963.2-201ENST00000513686 578 ntBASIC1.53□□□□□ -2.16
AP4S1Q9Y587 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC1.53□□□□□ -2.16
AP4S1Q9Y587 BTF3P12-201ENST00000519620 469 ntBASIC1.53□□□□□ -2.16
AP4S1Q9Y587 AP002812.4-201ENST00000532139 286 ntBASIC1.53□□□□□ -2.16
AP4S1Q9Y587 AL354943.1-201ENST00000572103 781 ntBASIC1.53□□□□□ -2.16
AP4S1Q9Y587 AC012254.4-201ENST00000588843 273 ntBASIC1.53□□□□□ -2.16
AP4S1Q9Y587 MTCO2P22-201ENST00000603246 681 ntBASIC1.53□□□□□ -2.16
AP4S1Q9Y587 AL355297.2-201ENST00000604792 129 ntBASIC1.53□□□□□ -2.16
AP4S1Q9Y587 AC004908.2-201ENST00000609090 574 ntBASIC1.53□□□□□ -2.16
AP4S1Q9Y587 AL136981.2-201ENST00000617319 734 ntBASIC1.53□□□□□ -2.16
AP4S1Q9Y587 AC130650.2-201ENST00000618736 2403 ntBASIC1.53□□□□□ -2.16
AP4S1Q9Y587 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.53□□□□□ -2.16
AP4S1Q9Y587 AL133370.2-201ENST00000619934 439 ntBASIC1.53□□□□□ -2.16
AP4S1Q9Y587 AL360181.4-201ENST00000621752 134 ntBASIC1.53□□□□□ -2.16
AP4S1Q9Y587 AC007998.5-201ENST00000622938 237 ntBASIC1.53□□□□□ -2.16
AP4S1Q9Y587 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.17
AP4S1Q9Y587 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
AP4S1Q9Y587 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.52□□□□□ -2.17
AP4S1Q9Y587 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC1.52□□□□□ -2.17
AP4S1Q9Y587 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.52□□□□□ -2.17
AP4S1Q9Y587 RNU6-920P-201ENST00000410926 92 ntBASIC1.52□□□□□ -2.17
AP4S1Q9Y587 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC1.52□□□□□ -2.17
AP4S1Q9Y587 AL365496.1-201ENST00000426885 215 ntBASIC1.52□□□□□ -2.17
AP4S1Q9Y587 AL356867.1-201ENST00000429623 299 ntBASIC1.52□□□□□ -2.17
AP4S1Q9Y587 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.52□□□□□ -2.17
AP4S1Q9Y587 OR6K5P-201ENST00000447050 945 ntBASIC1.52□□□□□ -2.17
AP4S1Q9Y587 SNORD121B-201ENST00000458838 81 ntBASIC1.52□□□□□ -2.17
AP4S1Q9Y587 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.52□□□□□ -2.17
AP4S1Q9Y587 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
AP4S1Q9Y587 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC1.52□□□□□ -2.17
AP4S1Q9Y587 AC106734.1-201ENST00000568646 663 ntBASIC1.52□□□□□ -2.17
AP4S1Q9Y587 AC135628.1-201ENST00000568867 534 ntBASIC1.52□□□□□ -2.17
AP4S1Q9Y587 AC068313.1-201ENST00000604028 1008 ntBASIC1.52□□□□□ -2.17
AP4S1Q9Y587 AL009028.1-201ENST00000604895 802 ntBASIC1.52□□□□□ -2.17
AP4S1Q9Y587 AL161629.2-201ENST00000615347 275 ntBASIC1.52□□□□□ -2.17
AP4S1Q9Y587 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC1.52□□□□□ -2.17
AP4S1Q9Y587 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.51□□□□□ -2.17
AP4S1Q9Y587 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms